Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0136.Seq
(704 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 145 4e-35
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 143 1e-34
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 136 2e-32
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 126 2e-29
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 71 7e-13
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 6e-12
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 55 5e-08
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 5e-04
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.032
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.91
SB_52505| Best HMM Match : DUF963 (HMM E-Value=0.81) 31 0.91
SB_47707| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 2.8
SB_6045| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_2538| Best HMM Match : YTV (HMM E-Value=0.0015) 29 3.7
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 4.9
SB_10782| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 145 bits (351), Expect = 4e-35
Identities = 78/156 (50%), Positives = 97/156 (62%), Gaps = 1/156 (0%)
Frame = +3
Query: 240 PQQHNFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKNFFPEEVNSM 419
P+ FDAKRLIGRKF+D V DM HWPF V+ +G +PKI+V +KGE K+FFPEE++SM
Sbjct: 63 PENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSM 122
Query: 420 GLTKMKETAEAYFGKTVQNAVITVPAYFNDLKDKPQKMQVPSLA*TFSESSMNXXXXXXX 599
LTKMKETAEAY G V +AV+TVPAYF+D + + K ++A +N
Sbjct: 123 VLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATK-DAGTIAGLNVLRIINEPTAAAI 181
Query: 600 XXXXXXXXENEM-YLSLTSAAGTFDVSILTIEDGIF 704
E L GTFDVS+LTIEDGIF
Sbjct: 182 AYGLDKKVGVERNVLIYDLGGGTFDVSVLTIEDGIF 217
Score = 137 bits (332), Expect = 7e-33
Identities = 63/67 (94%), Positives = 65/67 (97%)
Frame = +1
Query: 55 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 234
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 235 MNPNNTI 255
MNP NT+
Sbjct: 61 MNPENTV 67
Score = 91.1 bits (216), Expect = 8e-19
Identities = 45/51 (88%), Positives = 47/51 (92%)
Frame = +2
Query: 509 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVPIFDLGGG 661
SQRQATKDAGTI+GLNVLRIINEPTAAAIAYGLDKK ERNV I+DLGGG
Sbjct: 153 SQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIYDLGGG 203
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 143 bits (347), Expect = 1e-34
Identities = 78/154 (50%), Positives = 97/154 (62%), Gaps = 1/154 (0%)
Frame = +3
Query: 240 PQQHNFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKNFFPEEVNSM 419
P+ FDAKRLIGR+++DATVQ+DMK WPF+++SD KPKI+V YKGE K F EE++SM
Sbjct: 63 PENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSM 122
Query: 420 GLTKMKETAEAYFGKTVQNAVITVPAYFNDLKDKPQKMQVPSLA*TFSESSMNXXXXXXX 599
L KMKETAEAY G+ V +AVITVPAYFND + + K ++A +N
Sbjct: 123 VLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATK-DAGTIAGLNVLRVINEPTAAAL 181
Query: 600 XXXXXXXXENEM-YLSLTSAAGTFDVSILTIEDG 698
E L GTFDVSILTI+DG
Sbjct: 182 AYGLDKSLSGEKNVLIFDLGGGTFDVSILTIDDG 215
Score = 133 bits (321), Expect = 2e-31
Identities = 60/67 (89%), Positives = 64/67 (95%)
Frame = +1
Query: 55 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 234
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 235 MNPNNTI 255
+NP NTI
Sbjct: 61 LNPENTI 67
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 136 bits (329), Expect = 2e-32
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +1
Query: 55 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 234
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 235 MNPNNTI 255
MNP NTI
Sbjct: 61 MNPTNTI 67
Score = 109 bits (261), Expect = 3e-24
Identities = 62/122 (50%), Positives = 74/122 (60%), Gaps = 25/122 (20%)
Frame = +3
Query: 240 PQQHNFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKNFFPEEV--- 410
P FDAKRLIGR+F+D V+ DMKHW FEVV++ G+PK+KV YKGE K FF EEV
Sbjct: 63 PTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNE 122
Query: 411 ----------------------NSMGLTKMKETAEAYFGKTVQNAVITVPAYFNDLKDKP 524
+SM L KMKETAEAY G V +AV+TVPAYFND + +
Sbjct: 123 AGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQA 182
Query: 525 QK 530
K
Sbjct: 183 TK 184
Score = 91.9 bits (218), Expect = 5e-19
Identities = 46/51 (90%), Positives = 46/51 (90%)
Frame = +2
Query: 509 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVPIFDLGGG 661
SQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDKK ERNV IFDLGGG
Sbjct: 246 SQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNVLIFDLGGG 296
Score = 64.9 bits (151), Expect = 6e-11
Identities = 39/100 (39%), Positives = 49/100 (49%)
Frame = +3
Query: 405 EVNSMGLTKMKETAEAYFGKTVQNAVITVPAYFNDLKDKPQKMQVPSLA*TFSESSMNXX 584
+++SM L KMKETAEAY G V +AV+TVPAYFND + + K
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPT 270
Query: 585 XXXXXXXXXXXXXENEMYLSLTSAAGTFDVSILTIEDGIF 704
+ L GTFDVS+L+IEDGIF
Sbjct: 271 AAAIAYGLDKKVGQERNVLIFDLGGGTFDVSVLSIEDGIF 310
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 126 bits (303), Expect = 2e-29
Identities = 68/155 (43%), Positives = 92/155 (59%)
Frame = +3
Query: 240 PQQHNFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKNFFPEEVNSM 419
P+ FDAKRLIGR ++D +VQ D+K +PF+VV KP ++V K E K F EE+++M
Sbjct: 761 PENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAM 820
Query: 420 GLTKMKETAEAYFGKTVQNAVITVPAYFNDLKDKPQKMQVPSLA*TFSESSMNXXXXXXX 599
LTKMKETAEAY GK V +AV+TVPAYFND + + K ++A +N
Sbjct: 821 VLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATK-DAGAIAGLTVMRIINEPTAAAI 879
Query: 600 XXXXXXXXENEMYLSLTSAAGTFDVSILTIEDGIF 704
+ L GTFDVS+LTI++G+F
Sbjct: 880 AYGMDKKEGEKNILVFDLGGGTFDVSLLTIDNGVF 914
Score = 105 bits (252), Expect = 3e-23
Identities = 48/62 (77%), Positives = 55/62 (88%), Gaps = 1/62 (1%)
Frame = +1
Query: 73 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPNN 249
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP N
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPEN 763
Query: 250 TI 255
T+
Sbjct: 764 TV 765
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 71.3 bits (167), Expect = 7e-13
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Frame = +1
Query: 61 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 234
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 235 MNPNNTI 255
+NP NTI
Sbjct: 90 INPKNTI 96
Score = 64.5 bits (150), Expect = 8e-11
Identities = 32/52 (61%), Positives = 39/52 (75%)
Frame = +2
Query: 512 QRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVPIFDLGGGYL 667
QR AT A +++G+ VLR+INEPTAAA+AYGL KK G NV + DLGGG L
Sbjct: 184 QRNATVKAASLAGITVLRVINEPTAAALAYGLHKK-EGVANVMVVDLGGGTL 234
Score = 58.4 bits (135), Expect = 5e-09
Identities = 45/156 (28%), Positives = 67/156 (42%), Gaps = 1/156 (0%)
Frame = +3
Query: 240 PQQHNFDAKRLIGRKFEDATVQADMKHWPFEVVSDG-GKPKIKVAYKGEDKNFFPEEVNS 416
P+ +DAKR IG+ F + K + F V +D G V KG PEE+
Sbjct: 92 PKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGG 151
Query: 417 MGLTKMKETAEAYFGKTVQNAVITVPAYFNDLKDKPQKMQVPSLA*TFSESSMNXXXXXX 596
+ K++ AE TV AV++VPA F D+K + ++ SLA +N
Sbjct: 152 YVIKKLRTMAERNLTTTVTKAVMSVPAEF-DIKQRNATVKAASLAGITVLRVINEPTAAA 210
Query: 597 XXXXXXXXXENEMYLSLTSAAGTFDVSILTIEDGIF 704
+ + GT DVS+L I+ G+F
Sbjct: 211 LAYGLHKKEGVANVMVVDLGGGTLDVSLLNIQGGMF 246
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 68.1 bits (159), Expect = 6e-12
Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = +3
Query: 264 KRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKNFFPEEVNSMGLTKMKE 440
KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V +M T++K
Sbjct: 127 KRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAMLFTRLKT 186
Query: 441 TAEAYFGKTVQNAVITVPAYFND 509
TAE V + VI+VP+Y+ D
Sbjct: 187 TAEIALKTKVTDCVISVPSYYTD 209
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +1
Query: 73 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 228
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Frame = +2
Query: 512 QRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKG---TGERNVPIFDLGGGYLR 670
QR+ DA +GLN LR++N+ TA ++AYG+ K+ RNV D+G L+
Sbjct: 211 QRRCMLDASATAGLNCLRLMNDTTAVSLAYGIYKQDLPTDKPRNVVFVDIGHSSLQ 266
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 55.2 bits (127), Expect = 5e-08
Identities = 25/57 (43%), Positives = 40/57 (70%)
Frame = +3
Query: 360 IKVAYKGEDKNFFPEEVNSMGLTKMKETAEAYFGKTVQNAVITVPAYFNDLKDKPQK 530
I V GE ++F PE+++++ L ++K AEA+ G+ V+ AVITVPA+FND + + K
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATK 58
Score = 48.0 bits (109), Expect = 7e-06
Identities = 36/68 (52%), Positives = 39/68 (57%), Gaps = 26/68 (38%)
Frame = +2
Query: 509 SQRQATKDAGTISGLNVL------------------------RIINEPTAAAIAYGLDKK 616
+QRQATKDAGTI+GL+VL RIINEPTAAAIAYGLDK
Sbjct: 52 AQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLDKA 111
Query: 617 --GTGERN 634
G ERN
Sbjct: 112 RGGKAERN 119
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.9 bits (94), Expect = 5e-04
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +1
Query: 124 GKVEIIANDQGNRTTPSYVAFTDTERLI--GDAAKNQVAMNPNN-TISMPNVSSDVSSKM 294
G IIAND G+R TP+ VAF+DTE+LI +V N N +S V + + KM
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLIDKDGLPYYEVESNERNIQVSPKEVINMIYKKM 142
Query: 295 L 297
L
Sbjct: 143 L 143
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 35.9 bits (79), Expect = 0.032
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Frame = +2
Query: 509 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK----GTGERNVPIFDLG 655
++R+A A + GLNVL+I+N TA A+ YGL ++ T E++ +D+G
Sbjct: 119 AERRALLRAAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKHFMFYDMG 171
Score = 34.3 bits (75), Expect = 0.098
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 354 PKIKVAYKGEDKNFFPEEVNSMGLTKMKETAEAYFGKTVQNAVITVPAYFN 506
P +K Y+ D F PEE+ M L + E + +++ V+TVP +FN
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFN 117
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.91
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +1
Query: 133 EIIANDQGNRTTPSYVAFT-DTERL 204
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_52505| Best HMM Match : DUF963 (HMM E-Value=0.81)
Length = 388
Score = 31.1 bits (67), Expect = 0.91
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = -2
Query: 700 IPSSMVRMDTSKVPAAEVKDRYISFSSTLFVKTVSNRSSSRFIDDSENVQARDGTC 533
IPSS+V ++ ++P++ V S+L + SSS F +S+ + + TC
Sbjct: 319 IPSSLVTRESDRIPSSFVAFESDGIPSSLVTREFDGLSSSLFACESDGIPSSFVTC 374
>SB_47707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 627
Score = 29.5 bits (63), Expect = 2.8
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +2
Query: 419 GAYENEG-NCRSLFWQNCAECSYHGSRVLQ*SQRQAT--KDAGTISGLNVLRIINEPTAA 589
GA +N + SL W C + YHG +V++ + A AG S NV+R + P A
Sbjct: 512 GATQNANESLNSLVWARCPKHKYHGYKVIRCAVAAAVCHFHAGASSRENVMRRLCVP-AG 570
Query: 590 AIAYGLDKKGTG 625
G K TG
Sbjct: 571 HTQEGHPSKRTG 582
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -2
Query: 241 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 143
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_6045| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = -2
Query: 409 TSSG--KKFLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRPMRRLASKLC-CWG 239
TS G + F+S+P A LGL PS +S Q +S+ L+P++ L +G
Sbjct: 14 TSRGYTRSFVSNPYSALAGLGLNPSALSSSDQSALSSLYSGLLGLKPLQSNKMSLAQMYG 73
Query: 238 SSP 230
SP
Sbjct: 74 GSP 76
>SB_2538| Best HMM Match : YTV (HMM E-Value=0.0015)
Length = 779
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/72 (25%), Positives = 37/72 (51%)
Frame = +1
Query: 67 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPN 246
P G+DL G+FQ GK+++ + + +++A + +GDAAK ++ +
Sbjct: 547 PTGGLDLS------GMFQ-GKIQVASTAESEAGRKAFLAECERNPNLGDAAKMKLESCLS 599
Query: 247 NTISMPNVSSDV 282
+ +S N+ D+
Sbjct: 600 DLVSTANIFKDL 611
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 1 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 87
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_10782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 399
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +3
Query: 321 WPFEVVSDGGKPKIKVAYKGEDKNFFPEEVNSMGLTKMKETAE 449
W F+ + +GG P+ + GE N + S G ++ + AE
Sbjct: 47 WVFDAIPEGGMPQSNIKSLGEHANIGFSKAMSSGWLRIDKQAE 89
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,435,491
Number of Sequences: 59808
Number of extensions: 575666
Number of successful extensions: 1761
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1747
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1853669818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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