Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0076.Seq
(662 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.029
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.039
SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_23156| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.36
SB_33346| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_20837| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_57521| Best HMM Match : rve (HMM E-Value=0.13) 31 1.1
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_26722| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_50240| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_24809| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_7301| Best HMM Match : S-antigen (HMM E-Value=2.1) 30 1.9
SB_51592| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16) 29 2.6
SB_53891| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_22404| Best HMM Match : SNF2_N (HMM E-Value=0) 29 3.4
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_4447| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_53888| Best HMM Match : TSP_3 (HMM E-Value=9.2e-11) 28 5.9
SB_53547| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_28433| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_38691| Best HMM Match : UPF0014 (HMM E-Value=2.2) 28 7.8
SB_38123| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_36169| Best HMM Match : DUF676 (HMM E-Value=0) 28 7.8
SB_29945| Best HMM Match : DUF125 (HMM E-Value=1.7) 28 7.8
SB_18179| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_1235| Best HMM Match : Astacin (HMM E-Value=0.0024) 28 7.8
SB_27891| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
>SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 286
Score = 35.9 bits (79), Expect = 0.029
Identities = 27/101 (26%), Positives = 41/101 (40%)
Frame = +3
Query: 234 ELLSTYPTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQS 413
EL++ T + +T T++ P P T + +T TP A TTT + T +
Sbjct: 92 ELIAATATITTYTATVTAPNATTTTPTATTTTTTTTTTTTPYA----TTTTPNTTTTTPN 147
Query: 414 TTCQDACDVELIPSTPTRHGRTISTGWLPSTGVPISLRTLP 536
TT P+T T T +T +T P + T P
Sbjct: 148 TTTTSPNATTTTPNTTTTTPNTTTTTPTATTTTPTATTTTP 188
Score = 28.3 bits (60), Expect = 5.9
Identities = 25/113 (22%), Positives = 38/113 (33%)
Frame = +3
Query: 243 STYPTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQSTTC 422
+T TP+ TTT + Y T T + + T TTT + T +TT
Sbjct: 112 ATTTTPTATTTTTTTTTTTTPYATTTTPNTTTTTPNTTTTSPNATTTTPNTTTTTPNTTT 171
Query: 423 QDACDVELIPSTPTRHGRTISTGWLPSTGVPISLRTLPKGPGLPHHRAYRTPH 581
P+ T T + +T P + T P + TP+
Sbjct: 172 TTPTATTTTPTATTTTPNTTTNTPNATTTTPTATTTTPNATTTTPNTTTTTPN 224
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 35.5 bits (78), Expect = 0.039
Identities = 36/109 (33%), Positives = 47/109 (43%), Gaps = 1/109 (0%)
Frame = +3
Query: 231 PELLSTYPTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQ 410
P ST TPS +T S P+ P+T + S + TP LS P+T S +
Sbjct: 144 PSTPSTPSTPST-PSTPSTPITP-GTPSTPSTPSAPGTPITPSTLSTPSTPSTPSTRSTP 201
Query: 411 STTCQDACDVEL-IPSTPTRHGRTISTGWLPSTGVPISLRTLPKGPGLP 554
ST + L +PSTP+ T ST PST +S P P P
Sbjct: 202 STPSTPSTPSTLSMPSTPSM-PNTPSTPSTPSTPSTLSTPITPSTPSTP 249
Score = 35.5 bits (78), Expect = 0.039
Identities = 42/122 (34%), Positives = 53/122 (43%), Gaps = 3/122 (2%)
Frame = +3
Query: 231 PELLSTYPTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQ 410
P ST TPS +T S P P+T + S+ + +TP S P+T S+
Sbjct: 643 PSTPSTRSTPST-PSTPSTPSTPST-PSTPSTPSLTHTPSTPSTPSTPSTPSTPSMPNTP 700
Query: 411 STTCQDACDVELIPSTPTRHGRTISTGWLPST-GVPISLRTL--PKGPGLPHHRAYRTPH 581
ST + PSTP G T ST PS G PI+ TL P P P R+ TP
Sbjct: 701 STPSTPS-----TPSTPITPG-TPSTPSTPSAPGTPITPSTLSTPSTPSTPSTRS--TPS 752
Query: 582 RP 587
P
Sbjct: 753 TP 754
Score = 35.5 bits (78), Expect = 0.039
Identities = 35/109 (32%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Frame = +3
Query: 231 PELLSTYPTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQ 410
P + +T TPS +T S P+ P+T + S + TP LS P+T S +
Sbjct: 694 PSMPNTPSTPST-PSTPSTPITP-GTPSTPSTPSAPGTPITPSTLSTPSTPSTPSTRSTP 751
Query: 411 STTCQDACDVEL-IPSTPTRHGRTISTGWLPSTGVPISLRTLPKGPGLP 554
ST + L +PSTP+ T ST PST +S P P P
Sbjct: 752 STPSTPSTPSTLSMPSTPSM-PNTPSTPSTPSTPSTLSTPITPSTPSTP 799
Score = 33.1 bits (72), Expect = 0.21
Identities = 36/110 (32%), Positives = 44/110 (40%), Gaps = 2/110 (1%)
Frame = +3
Query: 231 PELLSTYPTPSRFTT--TLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIIT 404
P LS TPS T T S P +T S + +TP SMP+T S +
Sbjct: 210 PSTLSMPSTPSMPNTPSTPSTPSTPSTLSTPITP-STPSTPSTPSTPSMPSTPSTPSTPS 268
Query: 405 GQSTTCQDACDVELIPSTPTRHGRTISTGWLPSTGVPISLRTLPKGPGLP 554
ST C + PSTP+ T ST PST S + P P P
Sbjct: 269 TPSTPCTP--NTPSTPSTPSMPS-TPSTPSTPSTPSTPSTPSAPSTPSTP 315
Score = 33.1 bits (72), Expect = 0.21
Identities = 36/110 (32%), Positives = 44/110 (40%), Gaps = 2/110 (1%)
Frame = +3
Query: 231 PELLSTYPTPSRFTT--TLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIIT 404
P LS TPS T T S P +T S + +TP SMP+T S +
Sbjct: 760 PSTLSMPSTPSMPNTPSTPSTPSTPSTLSTPITP-STPSTPSTPSTPSMPSTPSTPSTPS 818
Query: 405 GQSTTCQDACDVELIPSTPTRHGRTISTGWLPSTGVPISLRTLPKGPGLP 554
ST C + PSTP+ T ST PST S + P P P
Sbjct: 819 TPSTPCTP--NTPSTPSTPSMPS-TPSTPSTPSTPSTPSTPSAPSTPSTP 865
Score = 30.3 bits (65), Expect = 1.5
Identities = 30/93 (32%), Positives = 37/93 (39%)
Frame = +3
Query: 309 PATVTCLSIARSTATPRALSMPTTTLALSIITGQSTTCQDACDVELIPSTPTRHGRTIST 488
P T + S + +TPR S P+T S + ST PSTP H ST
Sbjct: 380 PCTPSTPSTPSTPSTPRTPSTPSTPCTPSTPSTPSTPI-----TPRTPSTPCTH----ST 430
Query: 489 GWLPSTGVPISLRTLPKGPGLPHHRAYRTPHRP 587
PST S + P P L H + TP P
Sbjct: 431 PGTPSTPSTPSTPSTPSTPSLTHTPS--TPSTP 461
Score = 28.7 bits (61), Expect = 4.5
Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = +3
Query: 309 PATVTCLSIARSTATPRALSMPTTTLALSIITGQSTTCQDACDVELIPSTPTRHG--RTI 482
P T + S + +TPR S P+T S + ST + PSTP H
Sbjct: 15 PCTPSTPSTPSTPSTPRTPSTPSTPCTPSTPSTPSTPITPS-----TPSTPCTHSTPSAP 69
Query: 483 STGWLPSTGVPISLRTLPKGPGLP 554
ST PST S + P P P
Sbjct: 70 STPSTPSTPCTPSTPSTPSTPSTP 93
>SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 33.1 bits (72), Expect = 0.21
Identities = 29/88 (32%), Positives = 37/88 (42%)
Frame = +3
Query: 252 PTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQSTTCQDA 431
P + TT+ S P + T S A ST+TPR S TT+ + T STT
Sbjct: 9 PGTTSITTSTSTPSTSTPRAGSTTNTS-APSTSTPRTGSTTTTSAPSTSTTSNSTT---- 63
Query: 432 CDVELIPSTPTRHGRTISTGWLPSTGVP 515
PST T + +T PST P
Sbjct: 64 ----RAPSTSTPRAGSTTTTSAPSTSTP 87
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/72 (34%), Positives = 30/72 (41%)
Frame = +3
Query: 270 TTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQSTTCQDACDVELI 449
TTT S P + T S A ST+TPR S TT+ + T STT +
Sbjct: 76 TTTTSAPSTSTPRTGSTTTTS-APSTSTPRTGSTTTTSAPSTSTTSNSTTRAPSTSTPRT 134
Query: 450 PSTPTRHGRTIS 485
ST T T S
Sbjct: 135 GSTITLRTSTTS 146
>SB_23156| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 32.3 bits (70), Expect = 0.36
Identities = 23/97 (23%), Positives = 46/97 (47%)
Frame = +3
Query: 114 RNETPSKKARFWQSFVRSLKGSEDIRAEERYRPTRRSVFPELLSTYPTPSRFTTTLSLPL 293
R++TP K+ R R+ + +++ P R +V + TP+ ++++SL
Sbjct: 106 RSDTPKKRRRISVPRRRAGSAQGRLTTKKKTPPRRTNVLEAFTAAAGTPAGSSSSISLAS 165
Query: 294 RGLRYPATVTCLSIARSTATPRALSMPTTTLALSIIT 404
G+R +++ L+ T+TPR+ P + IT
Sbjct: 166 PGMR--SSLGSLTPPSRTSTPRSRLTPRSRSRSRTIT 200
>SB_33346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1074
Score = 31.1 bits (67), Expect = 0.84
Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 11/124 (8%)
Frame = +3
Query: 252 PTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQSTT-CQD 428
P + T+ ++P+ PAT ++A STAT +++ + + ++ +T STT
Sbjct: 275 PQSANTATSTTVPVSSHVTPATGCNTTMATSTATVQSIDTEQSPIVITSVTPPSTTMVPQ 334
Query: 429 ACDVELIPSTPTRHGR----TISTGWLPS------TGVPISLRTLPKGPGLPHHRAYRTP 578
V P+T R ++++ +PS T S++T P+ +P R
Sbjct: 335 KASVATSPTTTVHFQRLEKPSVASSLMPSPDSTVMTSQDTSMKTSPEATVVPSSNDIRAR 394
Query: 579 HRPP 590
P
Sbjct: 395 EGAP 398
>SB_20837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1304
Score = 31.1 bits (67), Expect = 0.84
Identities = 36/112 (32%), Positives = 48/112 (42%), Gaps = 3/112 (2%)
Frame = +3
Query: 210 PTRRSVFPELLSTYPTPSRFTTTLSLPLRGL--RYPATVTCLSIARSTATPRALSMPT-T 380
P S ++ T TT SLP + PATV+ SIA S TP + S T T
Sbjct: 1149 PLNESTSNASVAINSTVQASTTIYSLPPTSMLNSTPATVSIDSIAPSPTTPPSSSSTTIT 1208
Query: 381 TLALSIITGQSTTCQDACDVELIPSTPTRHGRTISTGWLPSTGVPISLRTLP 536
TL S++ T + +E ST G IS + ST +P S +P
Sbjct: 1209 TLNASVM----ATATPSASLEANASTMLSSG--ISVPSIDSTVLPDSSSYIP 1254
>SB_57521| Best HMM Match : rve (HMM E-Value=0.13)
Length = 1105
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Frame = +2
Query: 68 DIDRQNVQNTFRH--DWQKRDAVEESQILAVLRAFSKRFGRHQSRGKVQANTPQRFSRTP 241
+ID+QN T H DW + D +E++ V+ F R+ + +R S+
Sbjct: 816 EIDKQNYLVTVCHFSDWIEVDKLEDTLAPTVIEKTQAHFARYGIPVNCHTDNGKRLSKRD 875
Query: 242 VDLPYSKSIYDDPIAAAERITVPGYRYLPVHREI 343
D+P + +A+A + + HR +
Sbjct: 876 ADVPKHPASRSHLLASATHVFETYKNHTTHHRTL 909
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 110 WQKRDAVEESQILAVLRAFSKRFGRHQSRGKVQANTPQRFSRTPVDLP 253
W+ RD+ +S I AVL KR ++ R K N ++FS P
Sbjct: 4708 WKSRDSDSDSSIDAVLDEMEKRRAGYEDRRKSFENLKRKFSEPSCTSP 4755
>SB_26722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 319
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 122 DAVEESQILAVLRAFSKRFGRHQSRGKVQANTPQRFSRTPVDLPYSKSIYDDPI 283
D E+ ++ +R F++ +GR G QAN + + LPYS S+ D I
Sbjct: 195 DETEDRRLAETMREFTREYGR----GVRQANVRAKTKKLTGTLPYSLSMLPDRI 244
>SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1283
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = +3
Query: 459 PTRHGRTISTGWLPSTGVPISLRTLPKGPGLPHHRAYRTPHRPP 590
P HG G +P + P L+ P PG PH A PH PP
Sbjct: 1010 PAHHG-----GPIPISDGPGGLQGPPLIPGSPHRGASPMPHEPP 1048
>SB_50240| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +2
Query: 122 DAVEESQILAVLRAFSKRFGRHQSRGKVQANTPQRFSRTPVDLPYSKSIYDDPI 283
D E+ + +R F++ +GR + V+ANT ++ + T LPYS S+ D I
Sbjct: 147 DETEDRRRAETMREFTREYGRGVRQANVRANT-KKLTGT---LPYSLSMLPDRI 196
>SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1338
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 450 PSTPTRHGRTISTGWLPSTGVPISLRTLPKGPGLP 554
P TPT+ I T L +T V ++ R LP GP P
Sbjct: 614 PFTPTKESTRIDTKQLGTTFVLVNRRDLPTGPPPP 648
>SB_24809| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 780
Score = 29.9 bits (64), Expect = 1.9
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 3/117 (2%)
Frame = +3
Query: 234 ELLSTYPTPSRFTTTLSLPLRGLRY-PATVTC-LSIARSTATPRALSMPTTTLALSIITG 407
E + P+P+ T+ ++PL R A +T +++ STA P ++M T+T S +
Sbjct: 222 ETSTAMPSPTTRQTSTAIPLPMSRQISAVITSPMAMQTSTAIPSPMAMQTSTAIPSPMAM 281
Query: 408 Q-STTCQDACDVELIPSTPTRHGRTISTGWLPSTGVPISLRTLPKGPGLPHHRAYRT 575
Q ST + + P+ R IS +PS P+++RT +P A RT
Sbjct: 282 QTSTAIPSPMARQTSTAIPSPMARQISA--VPS---PMTMRT---SAAIPFSTAIRT 330
>SB_7301| Best HMM Match : S-antigen (HMM E-Value=2.1)
Length = 682
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = +3
Query: 459 PTRHGRTISTGWLPSTGVPISLRTLPKGPGLPHHRAYRTPHRPP 590
P HG G +P + P L+ P PG PH A PH PP
Sbjct: 143 PAHHG-----GPIPISDGPGGLQGPPLIPGSPHRGASPMPHEPP 181
>SB_51592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 200
Score = 29.5 bits (63), Expect = 2.6
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +3
Query: 219 RSVFPELLSTYPTPSRFTTTLS-LPLRGLRYPATVTCLSIARSTATP-RALSMPTTTLAL 392
R+ P + +T TP R TT S PLR + P T I + TP R ++ P T ++
Sbjct: 55 RTPLPIITTTSRTPLRIITTPSRTPLRIITDPITKISQIITTPSRTPLRIITDPITKIS- 113
Query: 393 SIITGQSTT 419
IIT S T
Sbjct: 114 QIITTLSRT 122
>SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16)
Length = 705
Score = 29.5 bits (63), Expect = 2.6
Identities = 35/107 (32%), Positives = 41/107 (38%), Gaps = 3/107 (2%)
Frame = +3
Query: 231 PELLSTYPTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQ 410
P PT TTT + G PAT + +T P PTTT A S
Sbjct: 320 PSTTRAPPTTGAVTTTGAPATTGA--PATTVAPT---TTGAPTTTGAPTTTGAPSTTEAP 374
Query: 411 STTCQDACDVELIPST---PTRHGRTISTGWLPSTGVPISLRTLPKG 542
STT +A PST PT +TG P+T P L L G
Sbjct: 375 STT--EAPSTTEAPSTTEVPTTSAVPTTTG-APTTAPPDCLDALGLG 418
>SB_53891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 29.1 bits (62), Expect = 3.4
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +2
Query: 194 RGKVQANTPQRFSRTPVDLPYSKSIYDDPIAAAERITVPGY--RYLPVHREIYGYSPRPI 367
RG ++A+ ++SR P PYS + P+ + ER++ P Y R + + P
Sbjct: 406 RGGLRAS--DKYSRAPPPAPYSPNKSTKPLYSDERVSPPKYEDRSYAAYNDNAREKSSPR 463
Query: 368 YAHNYPRSLDYYRPIYHVPRRVR 436
Y N S DY YH +++
Sbjct: 464 YPDN-RTSPDYPGNGYHDNEKIQ 485
>SB_22404| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 1918
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 3/24 (12%)
Frame = +3
Query: 528 TLPKGP---GLPHHRAYRTPHRPP 590
T P+GP G HH Y P RPP
Sbjct: 166 TYPQGPSPGGTVHHHGYNAPRRPP 189
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +3
Query: 435 DVELIPSTPTRHGRTISTGWLPSTGVPISLRTLPKGPG 548
DV +P TP H T+ P G P + GPG
Sbjct: 1924 DVACVPKTPGPHELTVKYDDQPIPGSPFKFNAVEGGPG 1961
>SB_4447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 770
Score = 28.3 bits (60), Expect = 5.9
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Frame = +3
Query: 201 RYRPTRRSVFPELLSTYPTPSRFTTTLSLPLRGLRYP----ATVTCLSIARSTATPRALS 368
R+ P + + +L++ YP + + LPL RY ++ L AR LS
Sbjct: 506 RHSPLLVNHYSQLVNRYPKTNSSSLVTRLPLSVTRYRHSPLLSLLPLFTARQPHLSARLS 565
Query: 369 MPTTTLALSIITGQSTTCQDA 431
+P T + S++T +CQ A
Sbjct: 566 LP-ETYSSSLVTRYPLSCQTA 585
>SB_53888| Best HMM Match : TSP_3 (HMM E-Value=9.2e-11)
Length = 1012
Score = 28.3 bits (60), Expect = 5.9
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +3
Query: 210 PTRRSVFPELLSTYP-TPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTL 386
P S PE+ + P +PS T +++ P + P T L ++ +MPTT
Sbjct: 886 PISTSAAPEITTANPGSPSTTTKSVTTPQTSPKTPQTPATLPTTQTPEPGTEKTMPTTA- 944
Query: 387 ALSIITGQSTT 419
+ TGQ TT
Sbjct: 945 --TPGTGQPTT 953
>SB_53547| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1381
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 122 DAVEESQILAVLRAFSKRFGRHQSRGKVQANTPQRFSRTPVDLPYSKSIYDDPI 283
D E+ + +R F++ +GR G QAN + LPYS+S+ D I
Sbjct: 774 DETEDRRRAETMREFTREYGR----GVRQANVRAKTKELTGTLPYSQSMLPDRI 823
>SB_28433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 536
Score = 28.3 bits (60), Expect = 5.9
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +3
Query: 210 PTRRSVFPELLSTYPT-PSRFTTTLSL-PLRGLRYPATVTCLSIARSTATPR 359
PTR S+FP S +PT S F T SL P RG +P + S PR
Sbjct: 295 PTRGSLFPTRGSLFPTRGSLFPTRGSLFPTRGSLFPTRGFLIPTRGSFYVPR 346
>SB_38691| Best HMM Match : UPF0014 (HMM E-Value=2.2)
Length = 430
Score = 27.9 bits (59), Expect = 7.8
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 5/146 (3%)
Frame = +3
Query: 153 SFVRSLKGSEDIRAEERYRPTRRSVFPELLSTYPTPSRFTTTLSLPLRGLRYPATVTCLS 332
+ +++++G D+ RPT V L+ + S FTT + + P V +
Sbjct: 94 NLIKTVQGKSDVTPCRAIRPTVTPVVVSLMKALKSKSDFTTCHA--IHPTVTPVVVNLIK 151
Query: 333 I--ARSTATPRALSMPTTTLALSIITGQSTTCQDACDVELIPSTPTRHGRTISTGWLPS- 503
+S TP PT T ++ T Q V LI + + G T P+
Sbjct: 152 TVQGKSGVTPCHAIRPTVT---PVVVNLIKTVQVV--VSLIKTVQCKSGVTPCHAIRPTV 206
Query: 504 TGVPISL-RTLPKGPGL-PHHRAYRT 575
T V +SL +T+ + G+ P H + T
Sbjct: 207 TSVDVSLIKTVQRKSGVTPCHAIHPT 232
>SB_38123| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 853
Score = 27.9 bits (59), Expect = 7.8
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Frame = +3
Query: 210 PTRRSVFPELLS---TYPTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTT 380
P + + P +L+ T P P + P L PA++T A +T T + TT
Sbjct: 346 PIKHNYTPAVLNHVNTLPQPHNKISNTPKPPIELPTPASITSSQTAHNTTT----LIDTT 401
Query: 381 TLALSIITGQSTTCQDACDVELIPST 458
T S + STT +A VE P +
Sbjct: 402 TSPTSTTSTASTTTANAIRVEEPPKS 427
>SB_36169| Best HMM Match : DUF676 (HMM E-Value=0)
Length = 2442
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = +3
Query: 231 PELLSTYPTPSRFTTTLSLPLRGLRYP----ATVTCLSIARSTATPRALSMPTTTLALS 395
P+ ++T P TT + L P A T +I+ ST+TP A P T A+S
Sbjct: 2244 PQSIATAPFVFGAATTTAEALTSTSTPFAFGAATTTAAISTSTSTPFAFGAPATAAAVS 2302
>SB_29945| Best HMM Match : DUF125 (HMM E-Value=1.7)
Length = 608
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = -3
Query: 531 ESVARWV-HRSMAASLSRWSCHALWAS 454
E++A ++ HR A+SL RW H+L AS
Sbjct: 566 EALAAYIGHRYTASSLKRWLIHSLGAS 592
>SB_18179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/74 (24%), Positives = 33/74 (44%)
Frame = +3
Query: 237 LLSTYPTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQST 416
++ T T + TTT + AT+T + +T T + TTT + T +T
Sbjct: 2 IIVTTTTTTTTTTTTTTTTTTAATTATITTATATTTTTTTTTTTTTTTTTTTTTTTTTTT 61
Query: 417 TCQDACDVELIPST 458
T ++ D + + +T
Sbjct: 62 TTKNNDDDDDVLAT 75
>SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +3
Query: 312 ATVTCLSIARSTATPRALSMPTTTLALSIITGQSTTCQDACDVELIPSTPT 464
ATVT + A +TAT A + TT A + T +T A + +T T
Sbjct: 691 ATVTATATATATATATATAATTTATATATATVTATVTAAASATAAVTATVT 741
>SB_1235| Best HMM Match : Astacin (HMM E-Value=0.0024)
Length = 249
Score = 27.9 bits (59), Expect = 7.8
Identities = 23/92 (25%), Positives = 37/92 (40%)
Frame = +3
Query: 213 TRRSVFPELLSTYPTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLAL 392
T + +ST T + +TT + + + T T S A +T ++ TTT+ +
Sbjct: 104 TTTTTISTTISTTTTTTTISTTTTT-ITAVIISTTTTTTSTANTTTITATITTTTTTITI 162
Query: 393 SIITGQSTTCQDACDVELIPSTPTRHGRTIST 488
+ TT A I +T TIST
Sbjct: 163 TATITTITTTITATITTTISTTTPFITATIST 194
>SB_27891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 609
Score = 27.9 bits (59), Expect = 7.8
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +3
Query: 180 EDIRAEER--YRPTRRSVFPELLSTYP-TPSRFTTTLSLPLRGLRYPATVTCLSIARSTA 350
+++RAE + R +R F L P RF + L R R+P ++ S ST
Sbjct: 319 KELRAEAKRMIRSSRTDFFNSLDDELCLNPKRFWSIFKLKSRDFRFPGIMSIGSAENSTQ 378
Query: 351 TPRALSMPTTTLAL 392
R S P + +L
Sbjct: 379 PARLASTPASIASL 392
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,727,547
Number of Sequences: 59808
Number of extensions: 536798
Number of successful extensions: 2074
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2043
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1705624125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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