Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0070.Seq
(759 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 31 0.77
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 31 0.77
SB_36350| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_53631| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 30 2.3
SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_27757| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_3322| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_51592| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 29 4.1
SB_50825| Best HMM Match : DUF1168 (HMM E-Value=4.1) 29 5.4
SB_59548| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_18215| Best HMM Match : DUF1168 (HMM E-Value=3.7) 28 7.2
SB_47305| Best HMM Match : I-set (HMM E-Value=0) 28 7.2
SB_27966| Best HMM Match : RCSD (HMM E-Value=0.11) 28 7.2
SB_24353| Best HMM Match : CUB (HMM E-Value=0.18) 28 7.2
SB_12028| Best HMM Match : DAG1 (HMM E-Value=0.22) 28 9.5
SB_48071| Best HMM Match : AAA_5 (HMM E-Value=3.1e-06) 28 9.5
SB_41301| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 31.5 bits (68), Expect = 0.77
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +1
Query: 292 TTLKKYTMRPNTTDKTV*VHMP-TDTRLPNLRRSKIASDPETSPARISTRTAKMISSRYV 468
T + T+ P TTD P T T L +K PET+PA +T + ++
Sbjct: 217 TAAPETTVAPETTDAPATTLAPKTTTALETTVEAKTTVVPETTPALETTSAPESTAATES 276
Query: 469 TGQTETVSTRKTT 507
T ET +++TT
Sbjct: 277 TVAPETTVSQETT 289
Score = 28.3 bits (60), Expect = 7.2
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 TGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTRLPNLRRS-KIASDPETSPARIS 432
T TE T ++ T+ P TT T P T P + + + PET+PA +
Sbjct: 271 TAATESTVAPETTVSQETTVAPETTVPTETTAAPETTVAPEITFAPETTVVPETTPALET 330
Query: 433 TRTAKMISSRYVTGQTETVSTRKTT 507
T + ++ T ET +++TT
Sbjct: 331 TSAPESTAATESTVAPETTVSQETT 355
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 31.5 bits (68), Expect = 0.77
Identities = 24/73 (32%), Positives = 30/73 (41%)
Frame = +1
Query: 292 TTLKKYTMRPNTTDKTV*VHMPTDTRLPNLRRSKIASDPETSPARISTRTAKMISSRYVT 471
T + K T P TT P T LP KI + PET+ +T + S T
Sbjct: 2896 TAVPKTTAAPETTPLPKTTAAPETTTLP-----KITAAPETTAVPKTTAAPETTSVPKTT 2950
Query: 472 GQTETVSTRKTTS 510
ET S KTT+
Sbjct: 2951 AAPETTSVPKTTA 2963
Score = 29.9 bits (64), Expect = 2.3
Identities = 22/73 (30%), Positives = 31/73 (42%)
Frame = +1
Query: 292 TTLKKYTMRPNTTDKTV*VHMPTDTRLPNLRRSKIASDPETSPARISTRTAKMISSRYVT 471
T++ K T P TT P T LP K + PET+P +T + + T
Sbjct: 2944 TSVPKTTAAPETTSVPKTTAAPETTPLP-----KTTAAPETTPLPKTTAAPETTTLPKTT 2998
Query: 472 GQTETVSTRKTTS 510
ET + KTT+
Sbjct: 2999 AAPETTTLPKTTA 3011
Score = 29.5 bits (63), Expect = 3.1
Identities = 32/113 (28%), Positives = 42/113 (37%), Gaps = 1/113 (0%)
Frame = +1
Query: 175 GRTAVLPLIKYNDQRFRTAEAGPTLGHTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHM 354
G TAV P + T E T E S T L K T P T+
Sbjct: 1981 GTTAV-PGTTAVSETVATPETTAAPETTAVPETTSAPETTALPKTTGAPETSSVQETTAA 2039
Query: 355 PTDTRLPNLRRSKIASD-PETSPARISTRTAKMISSRYVTGQTETVSTRKTTS 510
P T P + A+ PET+ +T + + + +T ET S KTTS
Sbjct: 2040 PETTAAPETTAAPEATAAPETTAPPETTAAPEATAVQGITAAPETTSAPKTTS 2092
Score = 29.1 bits (62), Expect = 4.1
Identities = 26/87 (29%), Positives = 34/87 (39%)
Frame = +1
Query: 250 GHTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTRLPNLRRSKIASDPETSPARI 429
G T E + TTL K T+ P TT P T +P K + PET+
Sbjct: 2702 GTTAAPEATAVPETTTLPKTTVAPETTTLPKTTAAPETTAVP-----KTTAAPETTSVPK 2756
Query: 430 STRTAKMISSRYVTGQTETVSTRKTTS 510
+T + T ET S KTT+
Sbjct: 2757 TTAAPGTSTVPKTTVAAETTSVPKTTA 2783
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +1
Query: 292 TTLKKYTMRPNTTDKTV*VHMPTDTRLPNLR-RSKIASDPETSPARISTRTAKMISSRYV 468
T+ + T P TT +P T P + + PET+ A +T + +S
Sbjct: 2325 TSAPETTSAPETTALPKTTAVPETTTPPETTAKPETTGAPETTSAPKTTAVQEATASPET 2384
Query: 469 TGQTETVSTRKTTS 510
T + ET + KTT+
Sbjct: 2385 TSEPETTALPKTTA 2398
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +1
Query: 292 TTLKKYTMRPNTTDKTV*VHMPTDTRLPNLRRSKIAS-DPETSPARISTRTAKMISSRYV 468
T + + T P TT K P T P + A+ PET+ +T K ++
Sbjct: 2343 TAVPETTTPPETTAKPETTGAPETTSAPKTTAVQEATASPETTSEPETTALPKTTAAPET 2402
Query: 469 TGQTETVSTRKTTS 510
T TET + TT+
Sbjct: 2403 TSPTETTAVPGTTA 2416
Score = 27.9 bits (59), Expect = 9.5
Identities = 22/73 (30%), Positives = 29/73 (39%)
Frame = +1
Query: 292 TTLKKYTMRPNTTDKTV*VHMPTDTRLPNLRRSKIASDPETSPARISTRTAKMISSRYVT 471
T++ K T P TT P T LP K + PET+ +T S T
Sbjct: 2836 TSVPKTTAAPETTSVPKTTAAPETTTLP-----KTTAAPETTSVPKTTAAPGTTSVPKTT 2890
Query: 472 GQTETVSTRKTTS 510
ET + KTT+
Sbjct: 2891 AAPETTAVPKTTA 2903
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 31.5 bits (68), Expect = 0.77
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +1
Query: 292 TTLKKYTMRPNTTDKTV*VHMP-TDTRLPNLRRSKIASDPETSPARISTRTAKMISSRYV 468
T + T+ P TTD P T T L +K PET+PA +T + ++
Sbjct: 2279 TAAPETTVAPETTDAPATTLAPKTTTALETTVEAKTTVVPETTPALETTSAPESTAATES 2338
Query: 469 TGQTETVSTRKTT 507
T ET +++TT
Sbjct: 2339 TVAPETTVSQETT 2351
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +1
Query: 292 TTLKKYTMRPNTTDKTV*VHMP-TDTRLPNLRRSKIASDPETSPARISTRTAKMISSRYV 468
T + T+ P TTD P T T L +K PET+PA +T + ++
Sbjct: 764 TAASETTVAPETTDAPATTLAPKTTTALETTVAAKTTVVPETTPALETTSAPESTAATES 823
Query: 469 TGQTETVSTRKTTS 510
T ET +T +
Sbjct: 824 TVAPETTVPTETAA 837
>SB_36350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 285 TEDYVEEVYDASQYHGQDGLGAYAYGYQTPESAKVENR 398
TE + + S YHGQDGLG A G + P+ ++++
Sbjct: 151 TEGLTGDFVELSAYHGQDGLGD-AQGLREPDRTPLKDK 187
>SB_53631| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +1
Query: 316 RPNTTDKTV*VHMPTDTRLPNLRRSKIASDPETSPARISTRTAKMISS 459
RP+ T T H P D R P + D +TS R S+ + + S
Sbjct: 544 RPSQTPPTSLKHFPGDERTPPTSLKHVPGDEQTSQVRFSSEPSSTLRS 591
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +1
Query: 346 VH-MPTDTRLPNLRRSKIAS-DPETSPARISTRTAKMISSRYVTGQTETVSTRKTTS 510
VH +P+ +R P+L + ++ P T+ I R+ + SR GQ T+ST KTTS
Sbjct: 1701 VHSIPSPSR-PSLNIAPSSTLTPSTAGHTIDIRSTNRVHSRAQEGQIPTLSTLKTTS 1756
>SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2317
Score = 29.5 bits (63), Expect = 3.1
Identities = 32/113 (28%), Positives = 42/113 (37%), Gaps = 1/113 (0%)
Frame = +1
Query: 175 GRTAVLPLIKYNDQRFRTAEAGPTLGHTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHM 354
G TAV P + T E T E S T L K T P T+
Sbjct: 49 GTTAV-PGTTAVSETVATPETTAAPETTAVPETTSAPETTALPKTTGAPETSSVQETTAA 107
Query: 355 PTDTRLPNLRRSKIASD-PETSPARISTRTAKMISSRYVTGQTETVSTRKTTS 510
P T P + A+ PET+ +T + + + +T ET S KTTS
Sbjct: 108 PETTAAPETTAAPEATAAPETTAPPETTAAPEATAVQGITAAPETTSAPKTTS 160
>SB_27757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 344
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 632 LKALPKDYYQQTYKALPSGYYQPQASEQQASVVAPPNSQP 751
+ A P +Y Q+ ++ GY QP +QQ+ + P S P
Sbjct: 152 MAANPNNYSSQSGASMMQGYTQPLLQQQQSHRLHVPTSNP 191
>SB_3322| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 777
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +1
Query: 364 TRLPNLRRSKIASDPETSPARISTRTAKMISSRYVTGQTETVSTRKTTS*GRAETSRRGS 543
TR+ LRRS A + +R S+ ++ R ++ VS +T RAE R
Sbjct: 497 TRMQELRRSSSARSARRASSRASSAKSQRRLERAMSAGAVRVSRPRTAQSDRAEEPREEP 556
Query: 544 RCE 552
R E
Sbjct: 557 RLE 559
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 29.1 bits (62), Expect = 4.1
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = +1
Query: 292 TTLKKYTMRPNTTDKTV*VHMPTDTRLPNLRRS-KIASDPETSPARISTRTAKMISSRYV 468
T L K T P TT P T P + K + PE + A +T + ++
Sbjct: 3018 TALPKTTAVPETTTPPETTAKPETTGAPETTSAPKTTAVPEATAAPETTSAPETTAAPET 3077
Query: 469 TGQTETVSTRKTTS 510
T ET S +TTS
Sbjct: 3078 TSAPETTSVPETTS 3091
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +1
Query: 292 TTLKKYTMRPNTTDKTV*VHMPTDTRLPNLR-RSKIASDPETSPARISTRTAKMISSRYV 468
T+ + T P TT +P T P + + PET+ A +T + +S
Sbjct: 2868 TSAPETTSAPETTALPKTTAVPETTTPPETTAKPETTGAPETTSAPKTTAVQEATASPET 2927
Query: 469 TGQTETVSTRKTTS 510
T + ET + KTT+
Sbjct: 2928 TSEPETTALPKTTA 2941
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +1
Query: 292 TTLKKYTMRPNTTDKTV*VHMPTDTRLPNLRRSKIAS-DPETSPARISTRTAKMISSRYV 468
T + + T P TT K P T P + A+ PET+ +T K ++
Sbjct: 2886 TAVPETTTPPETTAKPETTGAPETTSAPKTTAVQEATASPETTSEPETTALPKTTAAPET 2945
Query: 469 TGQTETVSTRKTTS 510
T TET + TT+
Sbjct: 2946 TSPTETTAVPGTTA 2959
Score = 27.9 bits (59), Expect = 9.5
Identities = 31/112 (27%), Positives = 41/112 (36%), Gaps = 1/112 (0%)
Frame = +1
Query: 175 GRTAVLPLIKYNDQRFRTAEAGPTLGHTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHM 354
G TAV P + T E T E S T L K T P T+
Sbjct: 3136 GTTAV-PGTTAVSETVATPETTAAPETTAVPETTSAPETTALPKTTGAPETSSVQETTAA 3194
Query: 355 PTDTRLPNLRRSKIASD-PETSPARISTRTAKMISSRYVTGQTETVSTRKTT 507
P T P + A+ PET+ +T + + + +T ET S KTT
Sbjct: 3195 PETTAAPETTAAPEATAAPETTAPPETTAAPEATAVQGITAAPETTSAPKTT 3246
>SB_51592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 200
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 612 SPILNTPSKLFLRIITSRPTKPFQVVITNHKHP 710
S I+ TPS+ LRIIT TK Q++ T + P
Sbjct: 91 SQIITTPSRTPLRIITDPITKISQIITTLSRTP 123
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 618 ILNTPSKLFLRIITSRPTKPFQVVITNHKHP 710
I+ TPS+ LRIIT TK Q++ T + P
Sbjct: 71 IITTPSRTPLRIITDPITKISQIITTPSRTP 101
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +1
Query: 292 TTLKKYTMRPNTTDKTV*VHMPTDTRLPNLRRSKIAS-DPETSPARISTRTAKMISSRYV 468
T + TM P TT P T P + + + PET+ A +T + ++R
Sbjct: 528 TAAPETTMAPETTIAPEATVAPETTMAPETTAAPVTTMAPETTAALETTMAPETTAARET 587
Query: 469 TGQTETVSTRKTTS 510
T ET KTT+
Sbjct: 588 TVAPETTLAPKTTA 601
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = +1
Query: 292 TTLKKYTMRPNTTDKTV*VHMPTDTRLPNLRRS-KIASDPETSPARISTRTAKMISSRYV 468
T+ TM P TT V P T P + + PET+ A +T + ++
Sbjct: 3316 TSAPATTMAPETTAAPVTTMAPETTAAPATTAALETTMVPETTAASETTVAPETTDAQAT 3375
Query: 469 TGQTETVSTRKTT 507
T ET + +KTT
Sbjct: 3376 TLAPETTAAQKTT 3388
>SB_50825| Best HMM Match : DUF1168 (HMM E-Value=4.1)
Length = 543
Score = 28.7 bits (61), Expect = 5.4
Identities = 30/117 (25%), Positives = 43/117 (36%), Gaps = 6/117 (5%)
Frame = +1
Query: 79 PKPGIDVFQIDI-EPEEAQKYL-----NSPPFTDPQLAGRTAVLPLIKYNDQRFRTAEAG 240
P +D + D+ EPEE +K P D + R PL + D + E
Sbjct: 57 PHKPVDFTEGDVSEPEEEEKQTPPKQTGVPVSEDVVASSRDRTEPLPDFEDVKEPEEEFE 116
Query: 241 PTLGHTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTRLPNLRRSKIASDPE 411
+ GR R+ T K T R T+D+ MPT+ + K PE
Sbjct: 117 EFVDEEGRVVRRIVRRTVTTKTVTTRTVTSDQAGPEEMPTEEAFLSAEPVKGTEVPE 173
>SB_59548| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2835
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = -3
Query: 460 LMRSFLPSL*IYEPVTSPDLTRFSTF----ADSGVWYP*AYAPRPSCPWYWD 317
L R+FLP +Y + +PDLT+ T D + Y + C WYWD
Sbjct: 1550 LRRTFLPYQGLYYVLITPDLTKQQTLLWRSGDLNISYGLGFY-ESGC-WYWD 1599
>SB_18215| Best HMM Match : DUF1168 (HMM E-Value=3.7)
Length = 338
Score = 28.3 bits (60), Expect = 7.2
Identities = 27/101 (26%), Positives = 39/101 (38%), Gaps = 6/101 (5%)
Frame = +1
Query: 79 PKPGIDVFQIDI-EPEEAQKYL-----NSPPFTDPQLAGRTAVLPLIKYNDQRFRTAEAG 240
P +D + D+ EPEE +K P D + R PL + D + E
Sbjct: 30 PHKPVDFTEGDVSEPEEGEKQTPPKQTGVPVSEDVVASSRDRTEPLPDFEDVKEPGEEFE 89
Query: 241 PTLGHTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTD 363
+ GR R+ T K T R T+D+ MPT+
Sbjct: 90 EFVDEEGRVVRRIVRRTVTTKTVTTRTVTSDQAGPEEMPTE 130
>SB_47305| Best HMM Match : I-set (HMM E-Value=0)
Length = 5832
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +3
Query: 201 QIQRP-EVSYS*-SRPH-SWTYWKNGKEIENTEDYVEEVYDASQYH 329
Q+++P EVSY RP + T+WKNGKE+ + + E+ YH
Sbjct: 1521 QVRQPVEVSYHVRGRPKPTVTWWKNGKELRDGKHV--EIRSGGTYH 1564
>SB_27966| Best HMM Match : RCSD (HMM E-Value=0.11)
Length = 652
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = +1
Query: 355 PTDTRLPNLRRSKIASDPETSPARISTRTAK-----MISSRYVTGQTETVSTRKTTS*GR 519
P+ + +RRSK + ETSP + R K ++S +TG T T T +S G+
Sbjct: 517 PSGQQTSVVRRSKRQAMKETSPDYVFRRNIKRNKSTAVASSDMTGVTNTTMTSAVSSTGK 576
Query: 520 A 522
A
Sbjct: 577 A 577
>SB_24353| Best HMM Match : CUB (HMM E-Value=0.18)
Length = 564
Score = 28.3 bits (60), Expect = 7.2
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Frame = +1
Query: 223 RTAEAGPTLGHTGR-TERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTRLPNLRRSKIA 399
RT+ +GP + E + +RTT + + P T ++ + + PN S
Sbjct: 231 RTSLSGPPPSYAESCAELRDPNVRTTSRPSSEMPPTYEEATRIDENSQPTDPNTHAS--- 287
Query: 400 SDPETSPARISTRTAKMISSRYVTGQTETVST 495
+DP +SPA IS + + T + +S+
Sbjct: 288 TDPASSPAVISGSEIVKVIGAFATNSSRVISS 319
>SB_12028| Best HMM Match : DAG1 (HMM E-Value=0.22)
Length = 1249
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 355 PTDTRLPNLRRSKIASDPETSPARISTRTAKMISSRYVTGQTET 486
PT T L+ ++ +S P TSPA T T + + +T T T
Sbjct: 773 PTATTTSTLQTTEPSSTPSTSPALTVTMTTVIATDSSITPTTVT 816
>SB_48071| Best HMM Match : AAA_5 (HMM E-Value=3.1e-06)
Length = 1532
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -2
Query: 488 TVSV*PVTYLDEIIFAVLVDIRAGDVSGSDAIFD 387
TVSV P L+E + D++ VSG D IF+
Sbjct: 1484 TVSVVPRMELEEFMMETFPDLKWPPVSGQDTIFE 1517
>SB_41301| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 72 RHNCDHGENRHNTQHGSS 19
RHNC H RHN+ H ++
Sbjct: 100 RHNCLHNTTRHNSLHNTT 117
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,150,138
Number of Sequences: 59808
Number of extensions: 532058
Number of successful extensions: 1728
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1718
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2070332524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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