Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0065.Seq
(789 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44740| Best HMM Match : GTP_EFTU (HMM E-Value=0) 121 8e-28
SB_19388| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 1e-13
SB_40813| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_35448| Best HMM Match : GTP_EFTU (HMM E-Value=1.6e-10) 44 1e-04
SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_49134| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_20450| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_27608| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_2806| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_45921| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_54566| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_11487| Best HMM Match : Guanylate_cyc (HMM E-Value=2.3e-06) 28 7.5
SB_8895| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_39205| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.5e-09) 28 9.9
SB_38321| Best HMM Match : ZZ (HMM E-Value=8.1e-09) 28 9.9
SB_25617| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
>SB_44740| Best HMM Match : GTP_EFTU (HMM E-Value=0)
Length = 833
Score = 121 bits (291), Expect = 8e-28
Identities = 57/95 (60%), Positives = 69/95 (72%)
Frame = +2
Query: 35 YQTFQRIVENVNVIIATYNDDGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADK 214
YQTF RIVE++NVIIATY+D+ GPMG ++V P KG+V FGSGLHGWAFTLKQ SE+Y+ K
Sbjct: 176 YQTFARIVESINVIIATYSDEDGPMGNIQVGPEKGTVAFGSGLHGWAFTLKQISEIYSAK 235
Query: 215 FKIDLVKLMNRLWEKTFSTLKRRSGQNKRMMTTNV 319
FKI KLM RLW F + + + K T NV
Sbjct: 236 FKIPPAKLMKRLWGDQFINAEDKKWK-KEQATGNV 269
Score = 105 bits (253), Expect = 3e-23
Identities = 73/188 (38%), Positives = 103/188 (54%), Gaps = 5/188 (2%)
Frame = +1
Query: 226 PCQAYEQVMGENFFNPQTKKWSKQKDDDNKRSFCMYVLDPIYKVFDAIMKFKKEEIDDLL 405
P + +++ G+ F N + KKW K++ N R F +VLDPI+K+FDAIM FKKE +LL
Sbjct: 240 PAKLMKRLWGDQFINAEDKKWKKEQATGNVRGFNQFVLDPIFKMFDAIMNFKKEATANLL 299
Query: 406 KKIGVTIKHEDSDKDGKALLKVVMRSWLPAGEALLR*LPFIYHHL*WPRNIVWRCYTRDP 585
+K+ + + E+ + +GK L K VMR WLPAGEA+L+ I HL P +V + Y R
Sbjct: 300 EKLKIKLTVEERELEGKPLFKTVMRKWLPAGEAMLQ---MIAIHL--PSPVVSQKY-RCE 353
Query: 586 TMMKLPLVSRAVILKPH**CT*ARWCRP---PT--KVVSTPFGRVFLWQGCYRTKARIMG 750
+ + P AV L + C P PT K FGRVF + K RIMG
Sbjct: 354 LLYEGP-QDDAVALG-------IKACDPEMVPTSDKGRFYAFGRVFSGKVASGQKVRIMG 405
Query: 751 PNFTLERK 774
P++ +K
Sbjct: 406 PHYVPGKK 413
Score = 103 bits (248), Expect = 1e-22
Identities = 56/92 (60%), Positives = 60/92 (65%)
Frame = +3
Query: 510 QMIAIHLPSPVVAQKYRMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFY 689
QMIAIHLPSPVV+QKYR E+LYEGP DD A+GIK+CDPE MVPTSDKGRFY
Sbjct: 335 QMIAIHLPSPVVSQKYRCELLYEGPQDDAVALGIKACDPE---------MVPTSDKGRFY 385
Query: 690 AFWTRFSLARLLPDKSSHHGTKLYTGKKEDLY 785
AF FS K G GKKEDLY
Sbjct: 386 AFGRVFSGKVASGQKVRIMGPHYVPGKKEDLY 417
>SB_19388| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 227
Score = 74.1 bits (174), Expect = 1e-13
Identities = 36/64 (56%), Positives = 42/64 (65%)
Frame = +2
Query: 128 PSKGSVGFGSGLHGWAFTLKQFSEMYADKFKIDLVKLMNRLWEKTFSTLKRRSGQNKRMM 307
P KG+V FGSGLHGWAFTLKQ SE+Y+ KFKI KLM RLW F + + + K
Sbjct: 34 PEKGTVAFGSGLHGWAFTLKQISEIYSAKFKIPPAKLMKRLWGDQFINAEDKKWK-KEQA 92
Query: 308 TTNV 319
T NV
Sbjct: 93 TGNV 96
Score = 44.8 bits (101), Expect = 8e-05
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +1
Query: 226 PCQAYEQVMGENFFNPQTKKWSKQKDDDNKRSFCMYVLDPIYK 354
P + +++ G+ F N + KKW K++ N R F +VLDPI+K
Sbjct: 67 PAKLMKRLWGDQFINAEDKKWKKEQATGNVRGFNQFVLDPIFK 109
>SB_40813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 809
Score = 45.2 bits (102), Expect = 6e-05
Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Frame = +2
Query: 35 YQTFQRIVENVNVIIATYNDDGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADK 214
Y + +++ VN +++ +++ ++ + P G+V F S + + FTL F+++Y D
Sbjct: 206 YYKLKHVIDEVNGLLSVFSEGAD---DLVISPLLGNVCFASSSYHFCFTLLSFAKLYVDS 262
Query: 215 F--KIDLVKLMNRLWEKTFSTLKRRSGQNKRMMTTN 316
F ID RLW + + K R K ++T+
Sbjct: 263 FGGNIDPQDFAQRLWGDMYFSSKTRKFTRKAPLSTS 298
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +3
Query: 558 RMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFYAF 695
++E Y GP D + + +CDP+ LM++ +K P+ D F+ F
Sbjct: 316 QVEHNYTGPLDSDIVDAMNNCDPDGVLMVHTTKQYPSQDATAFHVF 361
Score = 35.5 bits (78), Expect = 0.049
Identities = 12/44 (27%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Frame = +1
Query: 241 EQVMGENFFNPQTKKWSKQKD-DDNKRSFCMYVLDPIYKVFDAI 369
+++ G+ +F+ +T+K++++ ++RSF ++L+P+YK+F +
Sbjct: 274 QRLWGDMYFSSKTRKFTRKAPLSTSQRSFVEFILEPMYKIFGQV 317
>SB_35448| Best HMM Match : GTP_EFTU (HMM E-Value=1.6e-10)
Length = 563
Score = 44.4 bits (100), Expect = 1e-04
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Frame = +1
Query: 253 GENFFNPQTKKWSKQKDDDNKRS-FCMYVLDPIYKVFDAIM----KFKKEEIDDLLK-KI 414
G+ + + +TK+ K+ NK+ F ++LD I+ ++DA++ K K E+I + LK KI
Sbjct: 259 GDFYLDSKTKRIFKKAQLKNKKPLFVQFILDNIWALYDAVVIRRDKVKSEQISNSLKLKI 318
Query: 415 GVTIKHEDSDKDGKALLKVVMRSWLPAGEALL 510
V + D + L + WLP ALL
Sbjct: 319 SV---RDSRSSDRRVYLHAICSQWLPLSSALL 347
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 128 PSKGSVGFGSGLHGWAFTLKQFSEMYADKFKIDLVKLMNRLW 253
P G+V F S + GW F++K F+ +Y+ K + L LW
Sbjct: 217 PDLGNVVFSSAIDGWGFSIKDFANLYSKKLGLKAEILQKTLW 258
>SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1393
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -1
Query: 228 RSILNLSAYISENCLRVKAHP*RPDPKPTEPLLGSTRTSPMGPPSS 91
+ IL+ + N V+ +P PK T P+ G+ + PMGPP S
Sbjct: 619 KQILDAQRLLPSNSQNVEDSWRKPRPKSTPPM-GAVQVLPMGPPPS 663
>SB_49134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1060
Score = 29.5 bits (63), Expect = 3.2
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +3
Query: 549 QKYRMEMLYEGPHDDEAAI 605
+++++ YEGPHDDEA +
Sbjct: 548 ERHKINFKYEGPHDDEAIV 566
>SB_20450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 556
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 224 DLVKLMN-RLWEKTFSTLKRRSGQNKRMMTTNV 319
D+VK+M + +KT T+ R G NK M+T N+
Sbjct: 403 DMVKIMKPKFHQKTEQTIDMREGINKLMLTENL 435
>SB_27608| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 615 SCDPEAPLMMYVSKMVPTSDKGRFYAFWTRFSLARLLPDKSSHHG 749
SC P P + + K + Y W R +LARLL +S +HG
Sbjct: 29 SCTPVHPPPNAIVLTLTPLKKSQVYLTWIR-TLARLLEKRSPYHG 72
>SB_2806| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 600
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/54 (24%), Positives = 24/54 (44%)
Frame = +1
Query: 265 FNPQTKKWSKQKDDDNKRSFCMYVLDPIYKVFDAIMKFKKEEIDDLLKKIGVTI 426
++P T KW +R C + I+ + K + ++D K +GVT+
Sbjct: 443 YDPHTNKWKMVSPMLKRRGECFAIRKGIFVEWTLCFKAMEMNLEDQNKGVGVTV 496
>SB_45921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 615 SCDPEAPLMMYVSKMVPTSDKGRFYAFWTRFSLARLLPDKSSHHG 749
SC P P + + K + Y W R +LARLL +S +HG
Sbjct: 29 SCTPVHPPPNAIVLTLTPLKKSQVYLTWIR-TLARLLEKRSPYHG 72
>SB_54566| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 226 PCQAYEQVMGENFFNPQTKKWSKQKDDDN 312
P + + + FNPQ + W K K D+N
Sbjct: 80 PKRRFSVAVPRELFNPQEQYWEKMKQDNN 108
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 349 YKVFDAIMKFKKEEIDDLLKKIGVTI 426
Y+ I K K+EIDDL KK+G+ +
Sbjct: 482 YEEHPEITKQSKQEIDDLRKKMGIKV 507
>SB_11487| Best HMM Match : Guanylate_cyc (HMM E-Value=2.3e-06)
Length = 360
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +1
Query: 391 IDDLLKKIGVTIKHEDSDKDGKALLKVVMRSWLPAGEALLR*LPFIYHHL*WPRNIVWRC 570
ID+++KK ++I HE S D K +K L G + R + F H + + C
Sbjct: 18 IDNVIKKAKISISHERSTYDNKTCIKDTGTCGLLRGCSTSRIVRFRIRHFIQNQERITSC 77
Query: 571 Y 573
+
Sbjct: 78 F 78
>SB_8895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 562
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 226 PCQAYEQVMGENFFNPQTKKWSKQKDDDN 312
P + + + FNPQ + W K K D+N
Sbjct: 51 PKRRFSVAVPRELFNPQEQYWEKMKQDNN 79
>SB_39205| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.5e-09)
Length = 1084
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 681 RFYAFWTRFSLARLLPDKSSHHGTKLYT 764
R+ A WT F R P SSHHG +++
Sbjct: 889 RYSAIWT-FVFTRWTPSMSSHHGELIHS 915
>SB_38321| Best HMM Match : ZZ (HMM E-Value=8.1e-09)
Length = 584
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 205 IHLRELFEGESPPMKTRPETNRALARVDTH-LTHGTTIIVICGYNDVNI 62
+ LRE+ EG PP K + +L+ D+ T G+T++ +D ++
Sbjct: 307 VELREVLEGMVPPEKVESALSASLSLTDSEPSTGGSTVLAEIKVSDASM 355
>SB_25617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 479
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 126 STRTSPMGPPSSLYVAIMTLTFSTIRWNV 40
+T T P PP+SLY + + T+ W+V
Sbjct: 262 NTCTGPPSPPTSLYKPFLNSSAITLSWSV 290
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,071,876
Number of Sequences: 59808
Number of extensions: 618882
Number of successful extensions: 1969
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1965
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2167838629
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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