Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0063.Seq
(628 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 145 2e-35
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 138 3e-33
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 9e-31
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 116 1e-26
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 3e-13
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 67 1e-11
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 53 2e-07
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 3e-04
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.062
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.77
SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08) 29 2.3
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 2.3
SB_55110| Best HMM Match : Squash (HMM E-Value=0.21) 29 4.1
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 4.1
SB_36157| Best HMM Match : 7tm_1 (HMM E-Value=4.8e-18) 28 5.4
SB_19913| Best HMM Match : zf-C2H2 (HMM E-Value=8.9e-08) 28 5.4
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_7904| Best HMM Match : F420_oxidored (HMM E-Value=9.94922e-44) 28 5.4
SB_30622| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-14) 28 7.1
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 145 bits (352), Expect = 2e-35
Identities = 92/192 (47%), Positives = 112/192 (58%), Gaps = 4/192 (2%)
Frame = +3
Query: 63 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 243 MNP-NTQYSMPNVSSDVSSKMLLCKPT*STGLSRLSVMEANLRSR*HITVK--TKPFSPR 413
MNP NT + + ++ + V+ R + + K K F P
Sbjct: 61 MNPENTVFDAKRLIGRKFDDPVVAR---DMTHWPFHVIREGERPKIQVEFKGEKKSFFPE 117
Query: 414 KSVPWCLRK*RKLPK-LISAKLCRMQLSRFPRTQ*LSRQATKDAGTISGLNVLRSSINPL 590
+ L K ++ + + AK+ ++ RQATKDAGTI+GLNVLR P
Sbjct: 118 EISSMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTIAGLNVLRIINEPT 177
Query: 591 LLRMLTVFTKRV 626
+ K+V
Sbjct: 178 AAAIAYGLDKKV 189
Score = 137 bits (331), Expect = 8e-33
Identities = 60/87 (68%), Positives = 73/87 (83%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYNGEDKTFFPEEVSSM 427
P++T+FDAKRLIGRKF+D V DM HWPF V+ +G +PKI+V + GE K+FFPEE+SSM
Sbjct: 63 PENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSM 122
Query: 428 VLTKMKETAEAYLGKTVQNAVITVPAY 508
VLTKMKETAEAYLG V +AV+TVPAY
Sbjct: 123 VLTKMKETAEAYLGAKVTDAVVTVPAY 149
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 138 bits (334), Expect = 3e-33
Identities = 63/87 (72%), Positives = 76/87 (87%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYNGEDKTFFPEEVSSM 427
P++TIFDAKRLIGR+++DATVQ+DMK WPF+++SD KPKI+V Y GE KTF EE+SSM
Sbjct: 63 PENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSM 122
Query: 428 VLTKMKETAEAYLGKTVQNAVITVPAY 508
VL KMKETAEAYLG+ V +AVITVPAY
Sbjct: 123 VLGKMKETAEAYLGQKVTSAVITVPAY 149
Score = 137 bits (332), Expect = 6e-33
Identities = 83/174 (47%), Positives = 106/174 (60%), Gaps = 4/174 (2%)
Frame = +3
Query: 63 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 243 MNP-NTQYSMPNVSSDVSSKMLLCKPT*STGLSRLSVMEANLRSR*HITVK--TKPFSPR 413
+NP NT + + + + L ++ N + + + K K F+
Sbjct: 61 LNPENTIFDAKRL---IGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAE 117
Query: 414 KSVPWCLRK*RKLPK-LISAKLCRMQLSRFPRTQ*LSRQATKDAGTISGLNVLR 572
+ L K ++ + + K+ ++ RQATKDAGTI+GLNVLR
Sbjct: 118 EISSMVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKDAGTIAGLNVLR 171
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 130 bits (314), Expect = 9e-31
Identities = 59/63 (93%), Positives = 61/63 (96%)
Frame = +3
Query: 63 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 243 MNP 251
MNP
Sbjct: 61 MNP 63
Score = 113 bits (271), Expect = 1e-25
Identities = 63/112 (56%), Positives = 73/112 (65%), Gaps = 25/112 (22%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYNGEDKTFFPEEV--- 418
P +TIFDAKRLIGR+F+D V+ DMKHW FEVV++ G+PK+KV Y GE KTFF EEV
Sbjct: 63 PTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNE 122
Query: 419 ----------------------SSMVLTKMKETAEAYLGKTVQNAVITVPAY 508
SSMVL KMKETAEAYLG V +AV+TVPAY
Sbjct: 123 AGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAY 174
Score = 52.0 bits (119), Expect = 4e-07
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = +2
Query: 413 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAY 508
++SSMVL KMKETAEAYLG V +AV+TVPAY
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAY 242
Score = 35.5 bits (78), Expect = 0.036
Identities = 19/35 (54%), Positives = 21/35 (60%)
Frame = +3
Query: 522 RQATKDAGTISGLNVLRSSINPLLLRMLTVFTKRV 626
RQATKDAG ISGLNVLR P + K+V
Sbjct: 248 RQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKV 282
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 116 bits (280), Expect = 1e-26
Identities = 54/87 (62%), Positives = 69/87 (79%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYNGEDKTFFPEEVSSM 427
P++T+FDAKRLIGR ++D +VQ D+K +PF+VV KP ++V E KTF EE+S+M
Sbjct: 761 PENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAM 820
Query: 428 VLTKMKETAEAYLGKTVQNAVITVPAY 508
VLTKMKETAEAYLGK V +AV+TVPAY
Sbjct: 821 VLTKMKETAEAYLGKKVTHAVVTVPAY 847
Score = 109 bits (261), Expect = 2e-24
Identities = 75/172 (43%), Positives = 96/172 (55%), Gaps = 8/172 (4%)
Frame = +3
Query: 81 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNP-N 254
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP N
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPEN 763
Query: 255 TQYSMPNV---SSDVSSKMLLCKPT*STGLSRLSVMEANLRSR*HITVK--TKPFSPRKS 419
T + + S D +S K V++ N + + VK K F+ +
Sbjct: 764 TVFDAKRLIGRSWDDTSVQNDLK------FFPFKVVDKNKKPHVQVKVKDEIKTFAAEEI 817
Query: 420 VPWCLRK*RKLPKLISAKLCRMQLSRFPR-TQ*LSRQATKDAGTISGLNVLR 572
L K ++ + K + P RQATKDAG I+GL V+R
Sbjct: 818 SAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVMR 869
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 72.1 bits (169), Expect = 3e-13
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Frame = +2
Query: 251 QHTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYNGEDKTFFPEEVSSM 427
++TI KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V +M
Sbjct: 120 KNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAM 179
Query: 428 VLTKMKETAEAYLGKTVQNAVITVPAY 508
+ T++K TAE L V + VI+VP+Y
Sbjct: 180 LFTRLKTTAEIALKTKVTDCVISVPSY 206
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +3
Query: 81 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 236
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 66.9 bits (156), Expect = 1e-11
Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
Frame = +3
Query: 69 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 243 MNP-NTQY 263
+NP NT Y
Sbjct: 90 INPKNTIY 97
Score = 55.2 bits (127), Expect = 4e-08
Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDG-GKPKIKVAYNGEDKTFFPEEVSS 424
P++TI+DAKR IG+ F + K + F V +D G V G PEE+
Sbjct: 92 PKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGG 151
Query: 425 MVLTKMKETAEAYLGKTVQNAVITVPA 505
V+ K++ AE L TV AV++VPA
Sbjct: 152 YVIKKLRTMAERNLTTTVTKAVMSVPA 178
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/47 (51%), Positives = 36/47 (76%)
Frame = +2
Query: 368 IKVAYNGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAY 508
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA+
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAH 48
Score = 31.9 bits (69), Expect = 0.44
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +3
Query: 522 RQATKDAGTISGLNVL 569
RQATKDAGTI+GL+VL
Sbjct: 54 RQATKDAGTIAGLDVL 69
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 42.3 bits (95), Expect = 3e-04
Identities = 27/61 (44%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +3
Query: 132 GKVEIIANDQGNRTTPSYVAFTDTERLI--GDAAKNQVAMNP-NTQYSMPNVSSDVSSKM 302
G IIAND G+R TP+ VAF+DTE+LI +V N N Q S V + + KM
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLIDKDGLPYYEVESNERNIQVSPKEVINMIYKKM 142
Query: 303 L 305
L
Sbjct: 143 L 143
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 34.7 bits (76), Expect = 0.062
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 362 PKIKVAYNGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAY 508
P +K Y D TF PEE+ M+L + E + +++ V+TVP +
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPF 115
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.77
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +3
Query: 141 EIIANDQGNRTTPSYVAFT-DTERL 212
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08)
Length = 1011
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = +2
Query: 359 KPKIKVAYNGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYSMTLQTSHKR 538
+PK K E+ EE +M ++K LGK V+ + T ++TL S K+
Sbjct: 654 QPKFKKTKEEEEFDKLLEEADAMTQQEVKNVKNIKLGKNVKTQLYTCEPCNITL-NSQKQ 712
Query: 539 CRYHL 553
HL
Sbjct: 713 MSQHL 717
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -2
Query: 249 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 151
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_55110| Best HMM Match : Squash (HMM E-Value=0.21)
Length = 573
Score = 28.7 bits (61), Expect = 4.1
Identities = 24/98 (24%), Positives = 38/98 (38%)
Frame = -1
Query: 622 LLVKTVSIRSSSGLIDDRRTFKPEMVPASFVACLESH*VRGNRDNCILHSFAEISFGSFL 443
+L KT R + D+ +K A+ V + V + + S + F L
Sbjct: 57 MLQKTPRRRKHCKDVQDKECYKRHRGEANIVGMYKIKNVTKDTEAKETLSGCYVVFPPSL 116
Query: 442 HFRKHHGTDFLGEKGFVFTVICYLDLRFASITDNLERP 329
++ HGT + V+CY D FA IT + P
Sbjct: 117 NYFIAHGTCIEKNRAVNLDVLCYCDRGFAMITSLIALP 154
>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1488
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 406 PRGSQFHGAYENEGNCRSLSRQNCAECSYHGSRVLNDSP 522
PRG Q Y G+C S+S++NC + S+ + N P
Sbjct: 1142 PRGKQI--PYGTAGDCYSVSQENCRKGSFKVTYQYNTCP 1178
>SB_36157| Best HMM Match : 7tm_1 (HMM E-Value=4.8e-18)
Length = 474
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = -2
Query: 522 WRVIEYAGTV---ITAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLI 367
W+V G V +T + VLP A++ +F+S + K ++++P+ T +
Sbjct: 103 WKVTGTTGMVLCKVTNYLAVLPLVVCAITLLFISIERYRALSKPLIAAPITRTTL 157
>SB_19913| Best HMM Match : zf-C2H2 (HMM E-Value=8.9e-08)
Length = 532
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +1
Query: 451 CRSLSRQNCAECSYHGSRVLNDSPDKPQKMQVP 549
C +++ Q+ +C YHG + ++ P +P K +VP
Sbjct: 64 CDAITPQDNFKCPYHGEK-KHEKPAEPAKPEVP 95
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -2
Query: 456 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRP 283
S F+F ST + +S +KV+ SPL + + P+ G S C V + + P
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNVQNLSRCP 1165
>SB_7904| Best HMM Match : F420_oxidored (HMM E-Value=9.94922e-44)
Length = 851
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +1
Query: 424 HGAYENEGNCRSLSRQNCAECSYHGSRVLNDSPDKPQK 537
H + + +C + +N Y G V DSP KPQK
Sbjct: 702 HYSPDGTVSCSPVDSENTDNEDYRGFGVYRDSPTKPQK 739
>SB_30622| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-14)
Length = 856
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = -1
Query: 259 CVLGFIATWFLAASPMRRSVSVNAT*DGVVLLPWSLAMISTFPCWKTPTQEYVVPRSIPT 80
C+L I WF P+R S + VV+ S+ ++ F C P + P +IP+
Sbjct: 107 CLLLTIERWFAVVQPLRYQASFSKR--RVVVSLISVYCVACFLCCTLPFEVSFSPENIPS 164
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,791,597
Number of Sequences: 59808
Number of extensions: 515538
Number of successful extensions: 1488
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1481
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1560464625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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