Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302A08f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42230| Best HMM Match : PFK (HMM E-Value=0) 78 4e-15
SB_52724| Best HMM Match : adh_short (HMM E-Value=5.1e-08) 31 0.76
SB_58080| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_58386| Best HMM Match : rve (HMM E-Value=8.6e-26) 30 1.0
SB_51649| Best HMM Match : PAN (HMM E-Value=0.063) 29 2.3
SB_33144| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_38098| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_51082| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_50939| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_57035| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_51718| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_31260| Best HMM Match : rve (HMM E-Value=5.2e-25) 28 5.4
SB_26965| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_17427| Best HMM Match : ResIII (HMM E-Value=0.6) 28 5.4
SB_35603| Best HMM Match : DUF1309 (HMM E-Value=0.51) 27 7.1
SB_14616| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_45192| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_52091| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19) 27 9.4
SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 27 9.4
SB_46270| Best HMM Match : rve (HMM E-Value=1.2e-09) 27 9.4
SB_15486| Best HMM Match : rve (HMM E-Value=1.2e-09) 27 9.4
SB_2550| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_42230| Best HMM Match : PFK (HMM E-Value=0)
Length = 1103
Score = 78.2 bits (184), Expect = 4e-15
Identities = 40/71 (56%), Positives = 48/71 (67%), Gaps = 3/71 (4%)
Frame = +1
Query: 193 GMNAAVRSVVRMGIYLGCKVYFIREGYQGMVDGGDNIEEANWSSVSSIIHK---GGTIIG 363
GMNAA+R+VVRM +Y G KVY I EGYQG+VDGGDNI+E W VS II + GG G
Sbjct: 598 GMNAAIRAVVRMAMYTGAKVYTIWEGYQGLVDGGDNIKEVTWEDVSGIIQQVVIGGD--G 655
Query: 364 SARCMEFIKKE 396
S + K+E
Sbjct: 656 SLTGANYFKQE 666
>SB_52724| Best HMM Match : adh_short (HMM E-Value=5.1e-08)
Length = 316
Score = 30.7 bits (66), Expect = 0.76
Identities = 26/78 (33%), Positives = 36/78 (46%)
Frame = +1
Query: 202 AAVRSVVRMGIYLGCKVYFIREGYQGMVDGGDNIEEANWSSVSSIIHKGGTIIGSARCME 381
AA+R+VV + + L VYFIRE QG V EA + II T IG ++
Sbjct: 2 AALRNVVIV-VVLAIAVYFIREHCQGRV----CTSEARLDGKTVIITGATTGIGKETAVD 56
Query: 382 FIKKEGRLKAAYNLMSRG 435
K+ R+ + RG
Sbjct: 57 LAKRGARVIIGARNLDRG 74
>SB_58080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 687
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +2
Query: 17 EA*LHNIEKLKTI*ISYLLLRTTIF*LPRWTGQLLRNLLAAALIKARGLLCLL 175
EA L+ + ++KT I L R + + R+ GQ +RN + A ++ + GL+ LL
Sbjct: 20 EAVLYPLHRIKTA-IGRCLHREEVRQIKRFLGQEIRNDILAKVVNSEGLMSLL 71
>SB_58386| Best HMM Match : rve (HMM E-Value=8.6e-26)
Length = 212
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +2
Query: 191 RE*MPLCDQSCVWAYT*GVKYILFVKDTRAW*MEVITLKKRTGLLLAL*FT 343
R+ + LCD + G KY+L V D + V+ LK +TG L FT
Sbjct: 5 RQQVDLCDMQAFHRHNEGFKYLLTVIDLLSKFAWVVPLKDKTGASLVAAFT 55
>SB_51649| Best HMM Match : PAN (HMM E-Value=0.063)
Length = 323
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = +1
Query: 340 HKGGTIIGSARCMEFIKKEGRLKAAYNLMSRGITNLVVI 456
++ T + S C++++K+ YN+ G+T+LV +
Sbjct: 80 YRENTAVESKSCLDYLKRGAADNGVYNIHVEGVTHLVPV 118
>SB_33144| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 563
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 498 VGTKLAPVSEPSPPNNHKIGYTTA 427
V T L+PV E SP N GY TA
Sbjct: 286 VETPLSPVKEESPSTNKTFGYQTA 309
>SB_38098| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 503
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 206 LCDQSCVWAYT*GVKYILFVKDTRAW*MEVITLKKRTG 319
LCD + +Y G KY+L V D + V++LK +TG
Sbjct: 110 LCDVQSLSSYNNGNKYLLTVIDVLSKYALVVSLKDKTG 147
>SB_51082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1529
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 206 LCDQSCVWAYT*GVKYILFVKDTRAW*MEVITLKKRTG 319
LCD + +Y G KYIL V D + + LK +TG
Sbjct: 149 LCDMQSLSSYNDGYKYILSVIDVLSKYGWAVALKDKTG 186
>SB_50939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2337
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 206 LCDQSCVWAYT*GVKYILFVKDTRAW*MEVITLKKRTG 319
LCD + +Y G Y+L V D + V+ LK +TG
Sbjct: 1024 LCDMQALRSYNDGYNYLLIVIDLLSKYAWVVPLKDKTG 1061
>SB_57035| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 206 LCDQSCVWAYT*GVKYILFVKDTRAW*MEVITLKKRTG 319
LCD + +Y G Y+L V D + V+ LK +TG
Sbjct: 255 LCDMQALRSYNDGYNYLLTVIDVLSKYAWVVPLKDKTG 292
>SB_51718| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1602
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 206 LCDQSCVWAYT*GVKYILFVKDTRAW*MEVITLKKRTG 319
LCD + +Y G Y+L V D + V+ LK +TG
Sbjct: 117 LCDMQALRSYNDGYNYLLTVIDVLSKYAWVVPLKDKTG 154
>SB_31260| Best HMM Match : rve (HMM E-Value=5.2e-25)
Length = 1962
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 206 LCDQSCVWAYT*GVKYILFVKDTRAW*MEVITLKKRTG 319
LCD + +Y G Y+L V D + V+ LK +TG
Sbjct: 641 LCDMQALRSYNDGYNYLLTVIDVLSKYAWVVPLKDKTG 678
>SB_26965| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 827
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 206 LCDQSCVWAYT*GVKYILFVKDTRAW*MEVITLKKRTG 319
LCD + +Y G Y+L V D + V+ LK +TG
Sbjct: 764 LCDMQALRSYNDGYNYLLTVIDVLSKYAWVVPLKDKTG 801
>SB_17427| Best HMM Match : ResIII (HMM E-Value=0.6)
Length = 486
Score = 27.9 bits (59), Expect = 5.4
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +1
Query: 85 NILITTMDGSATQKFIGRGSHKGKGLAVFTSGGDSQGMNAAVRSVVR-MGIYLGCKVYFI 261
NIL + A KF+ + K K +++ SG G A + V+R M C V FI
Sbjct: 211 NILCRDTEIKAVTKFLEKHVQKKKPGSLYISGAPGTGKTACLTMVIRDMKEVSDCPVTFI 270
>SB_35603| Best HMM Match : DUF1309 (HMM E-Value=0.51)
Length = 78
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = -1
Query: 293 PPSTMPWYPSRIKYTLHPKYMPIRTT--DRTA 204
PP+ +PW YT+ PK P + + DR A
Sbjct: 26 PPTKLPWETQAPAYTMRPKTQPEKDSGGDRVA 57
>SB_14616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1307
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 206 LCDQSCVWAYT*GVKYILFVKDTRAW*MEVITLKKRTG 319
LCD + +Y G Y+L V D + V+ LK +TG
Sbjct: 599 LCDMQALRSYNDGYNYLLTVIDVLSNYAWVVPLKDKTG 636
>SB_45192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 634
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = -1
Query: 293 PPSTMPWYPSRIKYTLHPKYMPIRTT--DRTA 204
PP+ +PW YT+ PK P + + DR A
Sbjct: 52 PPTKLPWETQAPAYTMRPKTQPEKDSGGDRVA 83
>SB_52091| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1775
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 206 LCDQSCVWAYT*GVKYILFVKDTRAW*MEVITLKKRTG 319
+CD + +Y G Y+L V D + V+ LK +TG
Sbjct: 990 MCDMQALRSYNDGYNYLLTVIDVLSKYAWVVPLKDKTG 1027
>SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19)
Length = 158
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +2
Query: 206 LCDQSCVWAYT*GVKYILFVKDTRAW*MEVITLKKRTGLLLAL*FT 343
LCD GVKY+L V D + V+ LK +TG L FT
Sbjct: 13 LCDLQAFRRDNDGVKYLLTVIDVLSKFAWVVPLKDKTGSSLVEAFT 58
>SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 333
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +1
Query: 184 DSQGMNAAVR--SVVRMGIYLGCKVYFIREGYQGMVD 288
+ Q + AVR ++ R IY+ KVYF GY+ +D
Sbjct: 111 NEQSVGEAVRCSNIPRCEIYVVTKVYFTEHGYKETMD 147
>SB_46270| Best HMM Match : rve (HMM E-Value=1.2e-09)
Length = 657
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 206 LCDQSCVWAYT*GVKYILFVKDTRAW*MEVITLKKRTG 319
LCD + +Y G Y+L V D + V+ LK ++G
Sbjct: 146 LCDMQALRSYNDGYNYLLIVIDVLSKYAWVVPLKDKSG 183
>SB_15486| Best HMM Match : rve (HMM E-Value=1.2e-09)
Length = 662
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 206 LCDQSCVWAYT*GVKYILFVKDTRAW*MEVITLKKRTG 319
LCD + +Y G Y+L V D + V+ LK ++G
Sbjct: 146 LCDMQALRSYNDGYNYLLIVIDVLSKYAWVVPLKDKSG 183
>SB_2550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 206 LCDQSCVWAYT*GVKYILFVKDTRAW*MEVITLKKRTG 319
LCD + +Y G Y+L V D V+ LK +TG
Sbjct: 149 LCDMQALRSYNEGYNYLLTVIDVLKKYAWVVLLKDKTG 186
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,465,092
Number of Sequences: 59808
Number of extensions: 303278
Number of successful extensions: 977
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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