Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30094
(692 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30009| Best HMM Match : RVT_1 (HMM E-Value=1.2e-18) 35 0.072
SB_29609| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.072
SB_25444| Best HMM Match : SH2 (HMM E-Value=6.4) 35 0.072
SB_47163| Best HMM Match : SH2 (HMM E-Value=6.4) 35 0.072
SB_24694| Best HMM Match : RVT_1 (HMM E-Value=0.99) 35 0.072
SB_7414| Best HMM Match : SH2 (HMM E-Value=6.4) 34 0.13
SB_4311| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_31881| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_9149| Best HMM Match : Lipase_GDSL (HMM E-Value=0.51) 33 0.29
SB_49069| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_35551| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_11072| Best HMM Match : SH2 (HMM E-Value=6.4) 32 0.38
SB_52988| Best HMM Match : RVT_1 (HMM E-Value=2.5) 32 0.38
SB_25299| Best HMM Match : RVT_1 (HMM E-Value=1.1e-23) 32 0.38
SB_15503| Best HMM Match : DUF217 (HMM E-Value=5.3) 32 0.38
SB_6463| Best HMM Match : RVT_1 (HMM E-Value=2.2e-13) 32 0.38
SB_47851| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_12192| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.67
SB_9316| Best HMM Match : SH2 (HMM E-Value=6.4) 31 0.89
SB_16447| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_35765| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_24816| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_19530| Best HMM Match : EMI (HMM E-Value=3.5) 29 2.7
SB_4770| Best HMM Match : Exo_endo_phos (HMM E-Value=0.031) 29 2.7
SB_59287| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_30264| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_23320| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_43796| Best HMM Match : SH2 (HMM E-Value=6.4) 29 3.6
SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_4548| Best HMM Match : WD40 (HMM E-Value=6.7e-35) 29 3.6
SB_25871| Best HMM Match : SLH (HMM E-Value=1.1) 29 4.7
SB_16546| Best HMM Match : SH2 (HMM E-Value=6.4) 29 4.7
SB_6495| Best HMM Match : RVT_1 (HMM E-Value=1.2e-17) 29 4.7
SB_56531| Best HMM Match : SLH (HMM E-Value=1.1) 29 4.7
SB_48446| Best HMM Match : Pkinase (HMM E-Value=1.2e-05) 29 4.7
SB_46049| Best HMM Match : SH2 (HMM E-Value=6.4) 29 4.7
SB_33932| Best HMM Match : RVT_1 (HMM E-Value=1.3e-19) 29 4.7
SB_19464| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_9954| Best HMM Match : SLH (HMM E-Value=1.1) 29 4.7
SB_2234| Best HMM Match : RVT_1 (HMM E-Value=1.3e-19) 29 4.7
SB_58923| Best HMM Match : RVT_1 (HMM E-Value=0.022) 28 6.2
SB_27289| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
>SB_30009| Best HMM Match : RVT_1 (HMM E-Value=1.2e-18)
Length = 552
Score = 34.7 bits (76), Expect = 0.072
Identities = 13/52 (25%), Positives = 27/52 (51%)
Frame = +3
Query: 12 IRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGL 167
I+P++ Y ++V+ + HID + Q R R+ + W + L ++L +
Sbjct: 430 IQPILDYGAIVWGSTKKQHIDDMVKFQKRCARVILDKKWDAPSKPLFEELNI 481
>SB_29609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 233
Score = 34.7 bits (76), Expect = 0.072
Identities = 13/52 (25%), Positives = 27/52 (51%)
Frame = +3
Query: 12 IRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGL 167
I+P++ Y ++V+ + HID + Q R R+ + W + L ++L +
Sbjct: 83 IQPILDYGAIVWGSTKKQHIDDMVKFQKRCARVILDKKWDAPSKPLFEELNI 134
>SB_25444| Best HMM Match : SH2 (HMM E-Value=6.4)
Length = 252
Score = 34.7 bits (76), Expect = 0.072
Identities = 13/52 (25%), Positives = 27/52 (51%)
Frame = +3
Query: 12 IRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGL 167
I+P++ Y ++V+ + HID + Q R R+ + W + L ++L +
Sbjct: 130 IQPILDYGAIVWGSTKKQHIDDMVKFQKRCARVILDKKWDAPSKPLFEELNI 181
>SB_47163| Best HMM Match : SH2 (HMM E-Value=6.4)
Length = 172
Score = 34.7 bits (76), Expect = 0.072
Identities = 13/52 (25%), Positives = 27/52 (51%)
Frame = +3
Query: 12 IRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGL 167
I+P++ Y ++V+ + HID + Q R R+ + W + L ++L +
Sbjct: 93 IQPILDYGAIVWGSTKKQHIDDMVKFQKRCARVILDKKWDAPSKPLFEELNI 144
>SB_24694| Best HMM Match : RVT_1 (HMM E-Value=0.99)
Length = 309
Score = 34.7 bits (76), Expect = 0.072
Identities = 13/52 (25%), Positives = 27/52 (51%)
Frame = +3
Query: 12 IRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGL 167
I+P++ Y ++V+ + HID + Q R R+ + W + L ++L +
Sbjct: 228 IQPILDYGAIVWGSTKKQHIDDMVKFQKRCARVILDKKWDAPSKPLFEELNI 279
>SB_7414| Best HMM Match : SH2 (HMM E-Value=6.4)
Length = 323
Score = 33.9 bits (74), Expect = 0.13
Identities = 13/52 (25%), Positives = 27/52 (51%)
Frame = +3
Query: 12 IRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGL 167
I+P++ Y ++V+ + HID + Q R R+ + W + L ++L +
Sbjct: 207 IQPILDYGAIVWGSTKKQHIDDMVKFQKRCARVILDKKWDSPSKPLFEELNI 258
>SB_4311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 143
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +3
Query: 12 IRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRK 182
I+P+M Y V+ H +T+ LQ R R+ W+ ++ L ++L +E K
Sbjct: 7 IQPLMDYCITVWGDNLIEHDNTILLLQKRAARIIAYKKWYDHSMALFEELNIEPFTK 63
>SB_31881| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 32.7 bits (71), Expect = 0.29
Identities = 12/50 (24%), Positives = 25/50 (50%)
Frame = +3
Query: 18 PVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGL 167
P++ Y ++V+ + HID + Q R R+ + W + L ++L +
Sbjct: 1 PILDYGAIVWGSTKKQHIDDMVKFQKRCARVILDKKWDAPSKPLFEELNI 50
>SB_9149| Best HMM Match : Lipase_GDSL (HMM E-Value=0.51)
Length = 604
Score = 32.7 bits (71), Expect = 0.29
Identities = 12/52 (23%), Positives = 26/52 (50%)
Frame = +3
Query: 12 IRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGL 167
I+P++ Y ++V+ + HID + Q + R+ + W L ++L +
Sbjct: 457 IQPILDYGAIVWGSTKKQHIDDMVKFQKQCARVIIDKKWDAPAKPLFEELNI 508
>SB_49069| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 32.3 bits (70), Expect = 0.38
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +3
Query: 18 PVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGL 167
P++ Y +V+ + HID + Q R R+ + W + L ++L +
Sbjct: 1 PILDYGDIVWGSTKKQHIDDMVKFQKRCARVILDKKWDAPSKPLFEELNI 50
>SB_35551| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 32.3 bits (70), Expect = 0.38
Identities = 12/52 (23%), Positives = 27/52 (51%)
Frame = +3
Query: 12 IRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGL 167
I+P++ Y ++V+ + HID + + R R+ + W + L ++L +
Sbjct: 225 IQPILDYGAIVWGLTKKQHIDYMVKFEKRCARVILDKKWDAPSKPLFEELNI 276
>SB_11072| Best HMM Match : SH2 (HMM E-Value=6.4)
Length = 228
Score = 32.3 bits (70), Expect = 0.38
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +3
Query: 12 IRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPW 128
I+P++ Y ++V+ + HID + Q R R+ + W
Sbjct: 181 IQPILDYGAIVWGSTKKQHIDDMVKFQKRCARVILDKKW 219
>SB_52988| Best HMM Match : RVT_1 (HMM E-Value=2.5)
Length = 277
Score = 32.3 bits (70), Expect = 0.38
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +3
Query: 12 IRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPW 128
I+P++ Y ++V+ + HID + Q R R+ + W
Sbjct: 228 IQPILDYGAIVWGSTKKQHIDDMVKFQKRCARVILDKKW 266
>SB_25299| Best HMM Match : RVT_1 (HMM E-Value=1.1e-23)
Length = 407
Score = 32.3 bits (70), Expect = 0.38
Identities = 11/51 (21%), Positives = 26/51 (50%)
Frame = +3
Query: 15 RPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGL 167
+P++ Y ++V+ + HID + Q R R+ + W + + ++L +
Sbjct: 291 KPILDYGAIVWGSTKKQHIDDMVKFQKRCARVILDKKWDAPSKPVFEELNI 341
>SB_15503| Best HMM Match : DUF217 (HMM E-Value=5.3)
Length = 196
Score = 32.3 bits (70), Expect = 0.38
Identities = 17/72 (23%), Positives = 31/72 (43%)
Frame = +3
Query: 15 RPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYMKS 194
+P++ Y V+ + HID + Q R R+ + W + L ++L + K +
Sbjct: 97 KPILDYGVFVWGSTKKQHIDDMVKFQKRCARVILDKKWDAPSKPLFEELNIVPFDKRIIY 156
Query: 195 ASERYFDKAMRH 230
F KAM +
Sbjct: 157 LQLVLFFKAMNN 168
>SB_6463| Best HMM Match : RVT_1 (HMM E-Value=2.2e-13)
Length = 675
Score = 32.3 bits (70), Expect = 0.38
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +3
Query: 12 IRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPW 128
I+P++ Y ++V+ + HID + Q R R+ + W
Sbjct: 626 IQPILDYGAIVWGSTKKQHIDDMVKFQKRCARVILDKKW 664
>SB_47851| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 893
Score = 31.9 bits (69), Expect = 0.51
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +3
Query: 12 IRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPW 128
I+P++ Y ++V+ + HID + Q R R+ + W
Sbjct: 844 IQPILDYGAIVWGSTKKQHIDDMVKFQKRCARVILDNKW 882
>SB_12192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1339
Score = 31.5 bits (68), Expect = 0.67
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +3
Query: 6 TCIRPVMTYASVVFAHAARTHI-DTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRK 182
TCIRPV YA VF H ++ + L+ Q R R+ P L GLE++
Sbjct: 1228 TCIRPVTEYACPVFHHCLPQYLSNDLERCQKRALRIIY--PLLSYECAL-STAGLETLHN 1284
Query: 183 YMKSASERYFDKAMRHDNRL 242
+ S++ F + +RL
Sbjct: 1285 RRATISQKLFADILNPAHRL 1304
>SB_9316| Best HMM Match : SH2 (HMM E-Value=6.4)
Length = 169
Score = 31.1 bits (67), Expect = 0.89
Identities = 12/52 (23%), Positives = 26/52 (50%)
Frame = +3
Query: 12 IRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGL 167
I+P++ Y ++V+ + HID + Q R+ + W + L ++L +
Sbjct: 93 IQPILDYGAIVWGSTKKQHIDDMVKFQKGCARVILDKKWNAPSKPLLEELNI 144
>SB_16447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 949
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +3
Query: 12 IRPVMTYASVVFAHAARTHIDTLQSLQSRFCRL 110
IR V+ YASVVFA+ + ++L+++Q R R+
Sbjct: 715 IRSVIEYASVVFANLPQYLANSLEAIQKRALRI 747
>SB_35765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 3 KTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLA 113
++ IR V+ YAS VFA+ D L+++Q R ++A
Sbjct: 66 RSLIRSVIEYASAVFANLPNYLSDALENVQRRALKIA 102
>SB_24816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 662
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Frame = +3
Query: 3 KTCIRPVMTYASVVFAHAARTHIDTLQSLQ---SRFCR 107
KT +RP + YAS V++ ID ++++Q +RFC+
Sbjct: 517 KTLVRPQLEYASTVWSPHQEYLIDAIEAVQKKAARFCK 554
>SB_19530| Best HMM Match : EMI (HMM E-Value=3.5)
Length = 244
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Frame = +3
Query: 3 KTCIRPVMTYASVVFAHAARTHIDTLQSLQ---SRFCR 107
KT +RP + YAS V++ ID ++++Q +RFC+
Sbjct: 99 KTLVRPQLEYASTVWSPHQEYLIDAIEAVQKKAARFCK 136
>SB_4770| Best HMM Match : Exo_endo_phos (HMM E-Value=0.031)
Length = 599
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 3 KTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAP 125
++ +R + YASVVFA R D+L+ +Q C LA+ P
Sbjct: 477 RSLVRSTLEYASVVFADLPRYLSDSLERVQK--CTLAIIYP 515
>SB_59287| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 174
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 3 KTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLA 113
++ IR V+ YAS VFA+ D L+++Q R ++A
Sbjct: 66 RSLIRSVIEYASAVFANLPNYLSDALENVQRRALKIA 102
>SB_30264| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 689
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Frame = +3
Query: 3 KTCIRPVMTYASVVFAHAARTHIDTLQSLQ---SRFCR 107
KT +RP + YAS V++ ID ++++Q +RFC+
Sbjct: 585 KTLVRPQLEYASTVWSPHQEYLIDAIEAVQKKAARFCK 622
>SB_23320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1136
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/37 (29%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 6 TCIRPVMTYASVVFAHAARTHI-DTLQSLQSRFCRLA 113
TC+RP++ Y + +F H ++ + L+ +Q R +A
Sbjct: 643 TCVRPILEYCAPLFHHTIPAYVKEDLEHIQKRALSIA 679
>SB_43796| Best HMM Match : SH2 (HMM E-Value=6.4)
Length = 352
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 12 IRPVMTYASVVFAHAARTHIDTLQSLQSRFCRL 110
I+P++ Y ++V+ + HID + Q R R+
Sbjct: 315 IQPILDYGAIVWGSTKKQHIDDMVKFQKRCARV 347
>SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 29.1 bits (62), Expect = 3.6
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +3
Query: 12 IRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGA-PWFVRNVDLHDDLGLESIRKYM 188
IRPVM YAS V+ I+ L+ +Q R G + DL L L+S+
Sbjct: 444 IRPVMEYASPVWNPFTDRDINKLEQVQKNAARFVTGTYDPRASSSDLVKSLNLDSLEVRR 503
Query: 189 KSASERYFDKAMRHDNRLIVAAADYSPN 272
+ A F K +R++ I + PN
Sbjct: 504 QLAQLCLFYK-IRNNLVNIALPQQFQPN 530
>SB_4548| Best HMM Match : WD40 (HMM E-Value=6.7e-35)
Length = 844
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +3
Query: 12 IRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRK 182
I+P+M Y V+ +T+ LQ R R+ W+ ++ L ++L +E K
Sbjct: 691 IQPLMDYCITVWGDNLIELDNTMLLLQKRAARIIPDKKWYDHSMALFEELNIEPFTK 747
>SB_25871| Best HMM Match : SLH (HMM E-Value=1.1)
Length = 172
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 3 KTCIRPVMTYASVVFAHAARTHIDTLQSLQSR 98
++ +R + YASVVFA R D+L+ +Q R
Sbjct: 29 RSLVRSTLEYASVVFADLPRYLSDSLERVQKR 60
>SB_16546| Best HMM Match : SH2 (HMM E-Value=6.4)
Length = 124
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +3
Query: 12 IRPVMTYASVVFAHAARTHIDTLQSLQSRFCR 107
I+P++ Y ++V+ + HID + Q R R
Sbjct: 93 IQPILDYGAIVWGSTKKQHIDDMVKFQKRCAR 124
>SB_6495| Best HMM Match : RVT_1 (HMM E-Value=1.2e-17)
Length = 554
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 3 KTCIRPVMTYASVVFAHAARTHIDTLQSLQSR 98
++ +R + YASVVFA R D+L+ +Q R
Sbjct: 411 RSLVRSTLEYASVVFADLPRYLSDSLERVQKR 442
>SB_56531| Best HMM Match : SLH (HMM E-Value=1.1)
Length = 151
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 3 KTCIRPVMTYASVVFAHAARTHIDTLQSLQSR 98
++ +R + YASVVFA R D+L+ +Q R
Sbjct: 29 RSLVRSTLKYASVVFADLPRYLSDSLERVQKR 60
>SB_48446| Best HMM Match : Pkinase (HMM E-Value=1.2e-05)
Length = 228
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +3
Query: 12 IRPVMTYASVVFAHAARTHIDTLQSLQSRFCR 107
I+P++ Y ++V+ + HID + Q R R
Sbjct: 197 IQPILDYGAIVWGSTKKQHIDDMVKFQKRCAR 228
>SB_46049| Best HMM Match : SH2 (HMM E-Value=6.4)
Length = 252
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +3
Query: 12 IRPVMTYASVVFAHAARTHIDTLQSLQSRFCR 107
I+P++ Y ++V+ + HID + Q R R
Sbjct: 93 IQPILDYGAIVWGSTKKQHIDDMVKFQKRCAR 124
>SB_33932| Best HMM Match : RVT_1 (HMM E-Value=1.3e-19)
Length = 541
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3
Query: 12 IRPVMTYASVVFAHAARTHIDTLQSLQSRFCRL 110
IR V+ YASVVFA+ + + L+++Q R R+
Sbjct: 433 IRSVIEYASVVFANLPQYLANYLEAIQKRALRI 465
>SB_19464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1653
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/78 (28%), Positives = 32/78 (41%)
Frame = +3
Query: 126 WFVRNVDLHDDLGLESIRKYMKSASERYFDKAMRHDNRLIVAAADYSPNPDHAGASHRRR 305
W+ VDLHD + + SA + + + D + +S N GAS RR+
Sbjct: 1055 WYAGKVDLHDPHHMGATGVIPTSAEQLATVRRVEED-KTPKKEKPFSTNSLKRGASLRRK 1113
Query: 306 PXHVLTDPSDPITFALDA 359
V TD D +F A
Sbjct: 1114 HQFVSTDKLDMDSFVAQA 1131
>SB_9954| Best HMM Match : SLH (HMM E-Value=1.1)
Length = 132
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 3 KTCIRPVMTYASVVFAHAARTHIDTLQSLQSR 98
++ +R + YASVVFA R D+L+ +Q R
Sbjct: 10 RSLVRSTLEYASVVFADLPRYLSDSLERVQKR 41
>SB_2234| Best HMM Match : RVT_1 (HMM E-Value=1.3e-19)
Length = 476
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3
Query: 12 IRPVMTYASVVFAHAARTHIDTLQSLQSRFCRL 110
IR V+ YASVVFA+ + + L+++Q R R+
Sbjct: 368 IRSVIEYASVVFANLPQYLANYLEAIQKRALRI 400
>SB_58923| Best HMM Match : RVT_1 (HMM E-Value=0.022)
Length = 270
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +3
Query: 12 IRPVMTYASVVFAHAARTHIDTLQSLQSRFCR 107
I+P++ Y ++V+ + HID + Q R R
Sbjct: 239 IQPILDYGAIVWGSTKKQHIDDMIKFQKRCAR 270
>SB_27289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +3
Query: 6 TCIRPVMTYASVVFAHAARTHI-DTLQSLQSR 98
+ IRPV+ Y + VF HA +++ D ++ +Q R
Sbjct: 492 SAIRPVLEYCAAVFHHALPSYLSDDIERVQKR 523
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,942,870
Number of Sequences: 59808
Number of extensions: 350082
Number of successful extensions: 1098
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1098
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1805522550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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