Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00100
(789 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24678| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 2e-24
SB_24676| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 1e-22
SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 7e-22
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 89 4e-18
SB_31360| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 2e-17
SB_51693| Best HMM Match : Pro_isomerase (HMM E-Value=3.5e-19) 85 5e-17
SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23) 85 6e-17
SB_3070| Best HMM Match : Pro_isomerase (HMM E-Value=2.3e-05) 75 5e-14
SB_25950| Best HMM Match : Pro_isomerase (HMM E-Value=2.5e-24) 64 9e-11
SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23) 53 2e-07
SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 8e-05
SB_23239| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_6440| Best HMM Match : DUF638 (HMM E-Value=6.2) 37 0.016
SB_42464| Best HMM Match : Pro_isomerase (HMM E-Value=3.9e-06) 35 0.086
SB_21081| Best HMM Match : Pro_isomerase (HMM E-Value=0.11) 32 0.61
SB_45173| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_50604| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_50807| Best HMM Match : DOMON (HMM E-Value=0.00066) 29 5.7
SB_39340| Best HMM Match : DUF1656 (HMM E-Value=2.9) 28 9.9
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_32386| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
>SB_24678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 109 bits (263), Expect = 2e-24
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = +2
Query: 509 YGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDR 688
YG GWL MANAGK+TNGSQF+ITT+KT WLDG H FGKVLEGMDVV++IE T +D+
Sbjct: 115 YGPGWLCMANAGKNTNGSQFYITTIKTSWLDGSHTCFGKVLEGMDVVRRIENTRVDTHDK 174
Query: 689 PVKDVVISDTKTEVVAEPFSVTKE 760
P+ +V I+ + + P+ V K+
Sbjct: 175 PLDEVKITGIGSIPIESPYEVAKD 198
Score = 96.7 bits (230), Expect = 2e-20
Identities = 51/105 (48%), Positives = 59/105 (56%)
Frame = +3
Query: 258 DMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXX 437
D+ IG G +++GLFG T PKT NF LA K +G GYK S FHRVIKNFMIQ
Sbjct: 31 DVSIGGQPAGRVILGLFGDTAPKTVANFVALADKEQGFGYKDSIFHRVIKNFMIQGGDFT 90
Query: 438 XXXXXXXRSIYGERFEDENFKLKHMVLVGYLWLMQAKTQMDLNFS 572
SIYG+ F+DENF LKH G WL A + N S
Sbjct: 91 NKDGTGGYSIYGKYFDDENFNLKH---YGPGWLCMANAGKNTNGS 132
>SB_24676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 103 bits (248), Expect = 1e-22
Identities = 51/76 (67%), Positives = 59/76 (77%)
Frame = +2
Query: 530 MANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVI 709
MANAGKDTNGSQFFITTVKT WLDG+HVVFGKVLEGMDVV+K+E V PVK +I
Sbjct: 1 MANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKLE-NVNVKGSTPVKTCMI 59
Query: 710 SDTKTEVVAEPFSVTK 757
D+ T + +PF+V K
Sbjct: 60 DDSGTLPLDKPFNVEK 75
>SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 101 bits (242), Expect = 7e-22
Identities = 44/46 (95%), Positives = 46/46 (100%)
Frame = +2
Query: 509 YGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDV 646
YGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVL+GM+V
Sbjct: 134 YGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLKGMEV 179
Score = 62.5 bits (145), Expect = 4e-10
Identities = 33/73 (45%), Positives = 41/73 (56%)
Frame = +3
Query: 354 QKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHMVLVGYLW 533
+ +G GYK S FHRVI++FMIQ +SIYG++F DENFKL+H G W
Sbjct: 82 ESQKGFGYKNSIFHRVIQDFMIQGGDFTKGDGTGGKSIYGQKFADENFKLQH---YGAGW 138
Query: 534 LMQAKTQMDLNFS 572
L A D N S
Sbjct: 139 LSMANAGKDTNGS 151
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 89.0 bits (211), Expect = 4e-18
Identities = 43/68 (63%), Positives = 52/68 (76%)
Frame = +2
Query: 512 GAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRP 691
GAG LSMAN+G +TNGSQFF+TT KT WLDG+HVVFG V+EG DVV+K+E V + +
Sbjct: 227 GAGVLSMANSGPNTNGSQFFLTTEKTDWLDGKHVVFGNVIEGFDVVRKME-AVGSQSGKA 285
Query: 692 VKDVVISD 715
K VVI D
Sbjct: 286 SKKVVIDD 293
Score = 82.2 bits (194), Expect = 4e-16
Identities = 41/85 (48%), Positives = 49/85 (57%)
Frame = +3
Query: 255 FDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXX 434
FD+ IG+ + G IV+ L VP T ENF L +G GYKGS FHR+I FM Q
Sbjct: 141 FDITIGERSAGRIVMELRSDVVPMTAENFRCLCTHEKGFGYKGSSFHRIIPQFMCQGGDF 200
Query: 435 XXXXXXXXRSIYGERFEDENFKLKH 509
+SIYG +FEDENF LKH
Sbjct: 201 TKHNGTGGKSIYGAKFEDENFVLKH 225
>SB_31360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 235
Score = 87.0 bits (206), Expect = 2e-17
Identities = 46/81 (56%), Positives = 56/81 (69%)
Frame = +2
Query: 512 GAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRP 691
G G LSMANAG TNGSQFF+ T KT WLDG+HVVFG V +GMDVV+KIE V + +
Sbjct: 93 GPGILSMANAGPGTNGSQFFLCTAKTSWLDGKHVVFGSVKDGMDVVKKIE-KVGSDSGKT 151
Query: 692 VKDVVISDTKTEVVAEPFSVT 754
K VVI+D+ + + A VT
Sbjct: 152 SKKVVIADSASVLQAFDAVVT 172
Score = 81.8 bits (193), Expect = 6e-16
Identities = 42/85 (49%), Positives = 48/85 (56%)
Frame = +3
Query: 255 FDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXX 434
FD++IG G IV+ L VPKT ENF L +G GYKGS FHRVI FM Q
Sbjct: 7 FDIEIGGAPAGRIVMELRDDVVPKTAENFRALCTGEKGFGYKGSSFHRVIPGFMCQGGDF 66
Query: 435 XXXXXXXXRSIYGERFEDENFKLKH 509
+SIYG +F DENF LKH
Sbjct: 67 TRGDGTGGKSIYGAKFADENFNLKH 91
>SB_51693| Best HMM Match : Pro_isomerase (HMM E-Value=3.5e-19)
Length = 99
Score = 85.4 bits (202), Expect = 5e-17
Identities = 38/63 (60%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Frame = +2
Query: 524 LSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTG-ANDRPVKD 700
+SMANAG +TNGSQFFIT V TPWLD +H VFG+V++GMDV Q+I + T ND+P +D
Sbjct: 30 VSMANAGPNTNGSQFFITVVPTPWLDNKHTVFGRVVKGMDVAQQISLVKTNPKNDQPYED 89
Query: 701 VVI 709
+ I
Sbjct: 90 IKI 92
>SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23)
Length = 741
Score = 85.0 bits (201), Expect = 6e-17
Identities = 41/58 (70%), Positives = 47/58 (81%)
Frame = +2
Query: 494 LQAEAYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMT 667
L E G LSMAN+G +TNGSQFFITTV TP LDGRHVVFGKVL+GMDVV+++E T
Sbjct: 185 LSTEHDKPGLLSMANSGPNTNGSQFFITTVPTPHLDGRHVVFGKVLKGMDVVRELEAT 242
>SB_3070| Best HMM Match : Pro_isomerase (HMM E-Value=2.3e-05)
Length = 49
Score = 75.4 bits (177), Expect = 5e-14
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +2
Query: 524 LSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKI 658
LSMANAG TNGSQFF+ T KT WLDG+HVVFG V +GMDVV+K+
Sbjct: 3 LSMANAGPGTNGSQFFLCTAKTSWLDGKHVVFGSVKDGMDVVKKM 47
>SB_25950| Best HMM Match : Pro_isomerase (HMM E-Value=2.5e-24)
Length = 145
Score = 64.5 bits (150), Expect = 9e-11
Identities = 29/66 (43%), Positives = 45/66 (68%)
Frame = +2
Query: 518 GWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVK 697
G + MAN G+ TNGSQF+IT PW+D ++V FG+V+EG++V+ +E T N+RP
Sbjct: 70 GVVGMANKGRHTNGSQFYITLQPAPWMDTKYVAFGQVIEGLNVLDVLEGQET-FNERPKV 128
Query: 698 DVVISD 715
+ ++D
Sbjct: 129 ECRVAD 134
>SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23)
Length = 378
Score = 53.2 bits (122), Expect = 2e-07
Identities = 30/64 (46%), Positives = 40/64 (62%)
Frame = +2
Query: 524 LSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDV 703
LSMAN G +TNGSQFFI HVVFG V++G ++V++IE T +RP DV
Sbjct: 52 LSMANRGPNTNGSQFFII----------HVVFGHVIQGEELVRQIESLPTNEKNRPNADV 101
Query: 704 VISD 715
+S+
Sbjct: 102 KVSN 105
>SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1651
Score = 44.8 bits (101), Expect = 8e-05
Identities = 21/38 (55%), Positives = 27/38 (71%)
Frame = +2
Query: 518 GWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVL 631
G +SMAN G ++NGSQFFI K P LD ++ +FGK L
Sbjct: 305 GTVSMANNGPNSNGSQFFICYGKQPHLDMKYTMFGKYL 342
>SB_23239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 37.1 bits (82), Expect = 0.016
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Frame = +2
Query: 518 GWLSMANAG-KDTNGSQFFITTVKTPWLDGR-----HVVFGKVLEGMDVVQKIEMTVT 673
G L+MA +D+ SQFFI +LD + VFGKV++GMDVV KI T
Sbjct: 105 GTLAMARTQVRDSATSQFFINHKDNAFLDHGSRDFGYAVFGKVVKGMDVVDKIAQVPT 162
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = +3
Query: 279 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 422
++G I I L P +T NF LA G Y G++FHRVI FM+Q
Sbjct: 31 SLGEIEIELDADKAPISTANF--LAYVDSGY-YAGTQFHRVIPGFMVQ 75
>SB_6440| Best HMM Match : DUF638 (HMM E-Value=6.2)
Length = 175
Score = 37.1 bits (82), Expect = 0.016
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +2
Query: 608 HVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISD 715
HVVFG V++G ++V++IE T +RP DV +S+
Sbjct: 3 HVVFGHVIQGEELVRQIESLPTNEKNRPNADVKVSN 38
>SB_42464| Best HMM Match : Pro_isomerase (HMM E-Value=3.9e-06)
Length = 454
Score = 34.7 bits (76), Expect = 0.086
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +3
Query: 279 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIK 407
++G I I L+GK PK NF QL EG Y + FHR++K
Sbjct: 11 SVGDIDIELWGKETPKACRNFIQLCL--EGY-YDNTIFHRIVK 50
>SB_21081| Best HMM Match : Pro_isomerase (HMM E-Value=0.11)
Length = 48
Score = 31.9 bits (69), Expect = 0.61
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 8/46 (17%)
Frame = +3
Query: 285 GTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHR 398
G ++ LF VPKT ENF L +G G YKG FHR
Sbjct: 2 GRVLFELFADKVPKTAENFRALCTGEKGIGPSTGKPLHYKGCPFHR 47
>SB_45173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = -1
Query: 786 TFIINLVSLSFVTLKGSATTSVFVSDITTSLTGRSFAPVTVISIFCTTSI 637
T II ++ +T+ + TTS+ + I T T S + +I+I TTSI
Sbjct: 195 TIIITILITIIITITITTTTSITIIIIITITTTTSITIIIIITITTTTSI 244
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = -1
Query: 786 TFIINLVSLSFVTLKGSATTSVFVSDITTSLTGRSFAPVTVISIFCTTSI 637
T II ++ +T+ + TTS+ + I T T S + +I+I TTSI
Sbjct: 249 TIIITILITIIITITITTTTSITIIIIITITTTTSITIIIIITITTTTSI 298
>SB_50604| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 5/51 (9%)
Frame = -1
Query: 762 LSFVTLKGSATTSVFVSD-----ITTSLTGRSFAPVTVISIFCTTSIPSKT 625
LS V+L+G+AT S + D + T +T ++ +P T+IS F T+ +T
Sbjct: 79 LSSVSLEGTATRSSNLRDQSSMMLETPITEKTASPTTIISAFSRTTSLEET 129
>SB_50807| Best HMM Match : DOMON (HMM E-Value=0.00066)
Length = 218
Score = 28.7 bits (61), Expect = 5.7
Identities = 23/95 (24%), Positives = 34/95 (35%), Gaps = 1/95 (1%)
Frame = +2
Query: 494 LQAEAYGAGWLSMANAGKDTNGSQFFITTVKTPWLD-GRHVVFGKVLEGMDVVQKIEMTV 670
+ +A AGW+ D FF TT P LD + + LE + + +
Sbjct: 77 ITVKAETAGWVGFGWTEGDGKKMDFFSTTTGRPVLDASQDLTASSCLEDAGITTLVYSRL 136
Query: 671 TGANDRPVKDVVISDTKTEVVAEPFSVTKERLTKF 775
ND KDV + D + + F T F
Sbjct: 137 ATTND-TTKDVQLHDDEFMTLVWAFGAADAGPTAF 170
>SB_39340| Best HMM Match : DUF1656 (HMM E-Value=2.9)
Length = 225
Score = 27.9 bits (59), Expect = 9.9
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -1
Query: 756 FVTLKGSATTSVFVSDIT-TSLTGRSFAP-VTVISIFCTTSIPSKTLPKTTCL 604
++TL S T V IT S+T P +T+ S+ C T +P TL TC+
Sbjct: 74 YITL-ASVTCFTGVPHITLASVTCVKGVPYITLASVTCVTGVPYITLTSVTCV 125
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -1
Query: 705 TTSLTGRSFAPVTVISIFCTTSIP-SKTLPKTTCLPSNQGV 586
TTS+ + AP T S+ TT+ P + TLPKTT P V
Sbjct: 2835 TTSVPKTTAAPETT-SVPKTTAAPETTTLPKTTAAPETTSV 2874
>SB_32386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -2
Query: 242 VTLGPLGISSDLALAMNNKIPKAIVRVPMIKTSL 141
VTL PL +S+ ++N + A+VRV I SL
Sbjct: 38 VTLSPLQVSAKTGASLNGRAEVAMVRVSPILASL 71
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,702,567
Number of Sequences: 59808
Number of extensions: 466032
Number of successful extensions: 1021
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2167838629
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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