Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00041
(599 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21190| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 7e-21
SB_31925| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_39421| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.54
SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_38437| Best HMM Match : VWA (HMM E-Value=0) 31 0.94
SB_2460| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.94
SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098) 30 1.2
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_35530| Best HMM Match : Pinin_SDK_memA (HMM E-Value=2.4) 29 2.9
SB_53730| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_41824| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_31182| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_10932| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_3658| Best HMM Match : Keratin_B2 (HMM E-Value=3) 28 5.0
SB_27599| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_20630| Best HMM Match : rve (HMM E-Value=2.3e-19) 28 6.6
SB_53424| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_47601| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_32406| Best HMM Match : VWA (HMM E-Value=8.8e-32) 27 8.8
SB_29195| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_39579| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_36010| Best HMM Match : Remorin_C (HMM E-Value=6.1) 27 8.8
>SB_21190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 687
Score = 97.5 bits (232), Expect = 7e-21
Identities = 45/84 (53%), Positives = 57/84 (67%)
Frame = +3
Query: 3 IPNWTPLNSYAMELLTAGVVQSAGAALSPGEALRRLMEAVAGGLLLEHGPGLRDPCEKEL 182
+P + PLN +A+ELL + S+ L PGEA RR+ME ++ G+ LE GPGL DPCEKEL
Sbjct: 525 VPTFAPLNKWALELLVEKTLSSSEQPLGPGEAFRRIMECISSGIFLEGGPGLNDPCEKEL 584
Query: 183 VDALGNMPPQKREDLTAXAQQXLR 254
VDA + Q+ EDLTA AQ LR
Sbjct: 585 VDASVGISQQEAEDLTAAAQHALR 608
Score = 41.1 bits (92), Expect = 7e-04
Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +2
Query: 248 LKKIAFRQIHKVLDMEPLPKANTQRAPGSSRATRRSNTDNEHDAPNGEG-KIVKTEEKSD 424
L+ AFRQ+HKVL ++PLP QR G R E PN EG K++K EE
Sbjct: 607 LRLQAFRQLHKVLGIDPLPP--PQRRFGRFNRGGRFKRRREDSGPNDEGAKVLKKEEGEQ 664
Query: 425 CS 430
S
Sbjct: 665 MS 666
>SB_31925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 33
Score = 48.0 bits (109), Expect = 6e-06
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +3
Query: 147 GPGLRDPCEKELVDALGNMPPQKREDLTAXAQ 242
GPGL DPCEKELVDA + Q+ EDLTA AQ
Sbjct: 2 GPGLNDPCEKELVDASVGISQQEAEDLTAAAQ 33
>SB_39421| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1810
Score = 31.5 bits (68), Expect = 0.54
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -2
Query: 130 PPATASMSLRSASPGDRAAPADCTTPAVSSSIAYELS 20
PP+TAS +S +PGDR++P +P S YE S
Sbjct: 1446 PPSTAS---QSTTPGDRSSPGHLASPGHVGSPRYEAS 1479
>SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1281
Score = 31.1 bits (67), Expect = 0.71
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 272 IHKVLDMEPLPKANTQRAPGSSRATRRSNTDNEH 373
+H D+E P NT R S RA RRS D++H
Sbjct: 1117 LHPDPDLELDPDLNTNRTERSDRAKRRSRHDHKH 1150
>SB_38437| Best HMM Match : VWA (HMM E-Value=0)
Length = 3445
Score = 30.7 bits (66), Expect = 0.94
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 242 TVLKKIAFRQIHKVLDMEPLPKANTQR-APGSSRATRRSNTDNEHDAPNGEGK 397
+ +KK FR + V+ + PL K+N R GS R T R + N P+G K
Sbjct: 1649 SAIKKSCFRALPVVVAIYPLDKSNRGRDVSGSRRPTGRFSQVNFATGPDGVSK 1701
>SB_2460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 555
Score = 30.7 bits (66), Expect = 0.94
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 275 HKVLDMEPLPKANTQRAPGSSRATRRSNTDNEHDAPNGEGK 397
HK EP+ + +P +RSN++ + D PNG+G+
Sbjct: 391 HKGSSGEPVKDQRKKPSPWFMSNRKRSNSEGKDDKPNGDGR 431
>SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098)
Length = 620
Score = 30.3 bits (65), Expect = 1.2
Identities = 23/73 (31%), Positives = 35/73 (47%)
Frame = -2
Query: 256 LLKXCCAXAVRSSRFCGGMLPSASTSSFSQGSRRPGPCSSNRPPATASMSLRSASPGDRA 77
LL C ++ S + L S+S + S P P +S P T+S L S+SP +
Sbjct: 156 LLLHLCLFSI--SAYFPSPLTSSSPLTSSSPLTSPSPLTSPSP-LTSSSPLTSSSPLTSS 212
Query: 76 APADCTTPAVSSS 38
+P ++P SSS
Sbjct: 213 SPLTSSSPLTSSS 225
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/53 (39%), Positives = 26/53 (49%)
Frame = -2
Query: 196 PSASTSSFSQGSRRPGPCSSNRPPATASMSLRSASPGDRAAPADCTTPAVSSS 38
PS TSS S P SS P T+S L S+SP +P ++P SSS
Sbjct: 194 PSPLTSSSPLTSSSPLTSSS---PLTSSSPLTSSSPLTSPSPLTSSSPLTSSS 243
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Frame = -2
Query: 196 PSASTSSFSQGS--RRPGPCSSNRP-----PATASMSLRSASPGDRAAPADCTTPAVSSS 38
P S+S + S P P +S+ P P T+S L S+SP ++P +P SSS
Sbjct: 178 PLTSSSPLTSPSPLTSPSPLTSSSPLTSSSPLTSSSPLTSSSPLTSSSPLTSPSPLTSSS 237
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = -2
Query: 196 PSASTSSFSQGSRRPGPC---SSNRPPATASMSLRSASPGDRAAPADCTTPAVSSSIAYE 26
PS STS S S RP P SSN P + SP + P+ +P SS+ + E
Sbjct: 463 PSISTSPISNPSPRPHPSPHPSSNPSPNPSPNPSSDPSPNPSSNPSSDPSPNPSSNPSSE 522
Query: 25 LS 20
S
Sbjct: 523 PS 524
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = -2
Query: 199 LPSASTSSFSQGSRRPGPCSSNRP--PATASMSLRSASPGDRAAPADCTTPAVSSS 38
+PS + S+ S S PC+ N P P+T SM ++P + P+ +TP+ S+
Sbjct: 257 MPS-TPSTPSTPSTPSTPCTPNTPSTPSTPSMPSTPSTPSTPSTPSTPSTPSAPST 311
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = -2
Query: 199 LPSASTSSFSQGSRRPGPCSSNRP--PATASMSLRSASPGDRAAPADCTTPAVSSS 38
+PS + S+ S S PC+ N P P+T SM ++P + P+ +TP+ S+
Sbjct: 807 MPS-TPSTPSTPSTPSTPCTPNTPSTPSTPSMPSTPSTPSTPSTPSTPSTPSAPST 861
Score = 28.3 bits (60), Expect = 5.0
Identities = 22/92 (23%), Positives = 38/92 (41%)
Frame = -2
Query: 313 VRLGERLHVEHLMNLPESNLLKXCCAXAVRSSRFCGGMLPSASTSSFSQGSRRPGPCSSN 134
V L +H+ HL++L + + V + C L + ST S P S+
Sbjct: 600 VHLAHLVHLVHLVHLVHL-VHQVHLVRLVHLAHLCTCTLSTPSTPSTPSTRSTPSTPSTP 658
Query: 133 RPPATASMSLRSASPGDRAAPADCTTPAVSSS 38
P+T S ++P P+ +TP+ S+
Sbjct: 659 STPSTPSTPSTPSTPSLTHTPSTPSTPSTPST 690
>SB_35530| Best HMM Match : Pinin_SDK_memA (HMM E-Value=2.4)
Length = 170
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = +2
Query: 203 AAAETGRSDGLSATVLKKIAFR----QIHKVLDMEPLPKANTQRAPGSSRATRRSNTDNE 370
A A +S LS+T LK++ +I+ D+E L K N + + T++ +
Sbjct: 29 ALAALNQSLNLSSTFLKQVKNMTEKDEIYTGKDLEELDKVNNETKEWLEKMTKKQDDTEP 88
Query: 371 HDAP 382
H+AP
Sbjct: 89 HEAP 92
>SB_53730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/60 (23%), Positives = 26/60 (43%)
Frame = +2
Query: 311 NTQRAPGSSRATRRSNTDNEHDAPNGEGKIVKTEEKSDCSDTNKK*SILRRHDPHASNNP 490
N+ +P S + N+ N ++PN I + + TN S + P++ N+P
Sbjct: 63 NSPNSPNSPNSPNSPNSPNSPNSPNSPNSINSPNSPNSPNSTNSPNSPNSPNSPNSPNSP 122
>SB_41824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 451
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +2
Query: 305 KANTQRAPGSSRATRRSNTDNEHDAPNGEGKIVKTEEKSDCSDTNKK 445
K +++ S R+T+R +N H+ +G K +KS+ + KK
Sbjct: 349 KESSKDRDNSHRSTKRRKEENTHEKSSGSYKQKSKHDKSEVNGEKKK 395
>SB_31182| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1280
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = -2
Query: 187 STSSFSQGSRRPGPCSSNRPPATASMSLRSASPGDRAAPADCTTPA 50
ST S G P +S PA + R++SP RA+PA +PA
Sbjct: 499 STGDSSSGGASPARTTS---PARITSPARASSPAGRASPARGVSPA 541
>SB_10932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 494
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = -2
Query: 193 SASTSSFSQGSRRPGPCSSNRPPAT-ASMSLRSASPGDRAAPADCTTPAVS-SSIAYEL 23
S +++S +PG CSS+R A +++L S G+R A + P+ S S+I+ EL
Sbjct: 70 STTSASKCSSKAKPGACSSSRKDAIGGNLNLAFNSNGNRIIVAGHSKPSSSKSNISPEL 128
>SB_3658| Best HMM Match : Keratin_B2 (HMM E-Value=3)
Length = 138
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 193 SASTSSFSQGSRRPGPCSSNRPPATASMSLRSASPG 86
S +++SFS PG C+ P +T S SL S G
Sbjct: 95 STTSNSFSFTKCTPGDCAKTLPASTCSSSLYCISQG 130
>SB_27599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2937
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 193 SASTSSFSQGSRRPGPCSSNRPPATASMSLRSASPG 86
S +++SFS PG C+ P +T S SL S G
Sbjct: 1767 STTSNSFSFTKCTPGDCAKTLPASTCSSSLYCISQG 1802
>SB_20630| Best HMM Match : rve (HMM E-Value=2.3e-19)
Length = 698
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 148 PCSSNRPPATASMSLRSASPGDRAAPADCTTPAVSSSIAYELS 20
P SNRPP SPG A+P+ + AV S +Y L+
Sbjct: 574 PSPSNRPPVREG---GEGSPGPAASPSPSPSKAVVRSFSYLLN 613
>SB_53424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 360
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +3
Query: 183 VDALGNMPPQKREDL 227
VDALGN PQK EDL
Sbjct: 158 VDALGNGDPQKHEDL 172
>SB_47601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 652
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -2
Query: 157 RPGPCSSNRPPATASMSLRSASPGDRAAPADCTTPAVSSSIAY 29
+P P ++ +P T+S + A+P P TP+ S SI +
Sbjct: 72 KPSPVATKKP-RTSSTDEKQATPSSEKEPRASRTPSPSDSIDF 113
>SB_32406| Best HMM Match : VWA (HMM E-Value=8.8e-32)
Length = 1074
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 5/54 (9%)
Frame = -2
Query: 160 RRPGPCSSNRPPATASMSLRSASPGDRAAPADCTTPA-----VSSSIAYELSGV 14
RRPG N PP + + S PG R P P ++ Y L+G+
Sbjct: 527 RRPGGRPGNIPPFVPGLIIPSRRPGKRPGPRPGIRPGRGGRIPKPAVVYPLNGI 580
>SB_29195| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 157 RPGPCSSNRPPATASMSLRSASPGDRAAPADCTT 56
RP CSS PA ++ S RS+S G P T+
Sbjct: 347 RPSHCSSRVSPAPSNTSRRSSSRGSVPRPRRSTS 380
>SB_39579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 490
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/54 (31%), Positives = 21/54 (38%)
Frame = -1
Query: 209 RRHVAQRVNEFLLAGVPQAGPVFEQQAAGDGLHEPPQRLAGRQSGARGLHHAGR 48
R+HV +V+ LL G P P F + D P A Q H GR
Sbjct: 40 RKHVRPKVHGHLLQGAPPKAPAFTDETGYDPQWLPDDHPA-YQEYIEATHSMGR 92
>SB_36010| Best HMM Match : Remorin_C (HMM E-Value=6.1)
Length = 183
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 157 RPGPCSSNRPPATASMSLRSASPGDRAAPADCTT 56
RP CSS PA ++ S RS+S G P T+
Sbjct: 87 RPSHCSSRVSPAPSNTSRRSSSRGSVPRPRRSTS 120
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,871,798
Number of Sequences: 59808
Number of extensions: 363442
Number of successful extensions: 1534
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1511
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1451595000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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