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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10b09f
         (590 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_56513| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.6  
SB_50978| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.1  
SB_48213| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.1  
SB_44705| Best HMM Match : Ada_Zn_binding (HMM E-Value=8.9)            29   2.1  
SB_38746| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.1  
SB_27280| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.1  
SB_10660| Best HMM Match : RVP (HMM E-Value=6.5)                       29   2.1  
SB_50299| Best HMM Match : RVT_1 (HMM E-Value=1.5e-25)                 29   2.1  
SB_29085| Best HMM Match : RVT_1 (HMM E-Value=2.6e-26)                 29   2.1  
SB_11912| Best HMM Match : RVT_1 (HMM E-Value=2.6e-26)                 29   2.1  
SB_4782| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   2.1  
SB_58621| Best HMM Match : RVT_1 (HMM E-Value=1.5e-25)                 28   5.0  
SB_2280| Best HMM Match : RVT_1 (HMM E-Value=1.4e-25)                  28   6.6  

>SB_56513| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 196

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 23/78 (29%), Positives = 34/78 (43%)
 Frame = +2

Query: 128 LNLGVIGNQDRLLRSENFVRASMVSSWAHPLTLFAPTGTRINAIRAREVGASQSGSIRLT 307
           ++ G  GN   L   ++    S+      PL+L AP+ TRI A    EV    + ++ L 
Sbjct: 23  IDTGAEGNVIPLSNYKHIYPESLCDIDGKPLSL-APSNTRITAYGGHEVQHYGTCNLTLL 81

Query: 308 HGGLGSTFAAFDITNAAG 361
           H G  S    F + N  G
Sbjct: 82  HNGQSSPH-EFHVVNTTG 98


>SB_50978| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 523

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 23/78 (29%), Positives = 34/78 (43%)
 Frame = +2

Query: 128 LNLGVIGNQDRLLRSENFVRASMVSSWAHPLTLFAPTGTRINAIRAREVGASQSGSIRLT 307
           ++ G  GN   L   ++    S+      PL+L AP+ TRI A    EV    + ++ L 
Sbjct: 342 IDTGAEGNVIPLSNYKHIYPESLCDIDGKPLSL-APSDTRITAYGGHEVQHYGTCNLTLL 400

Query: 308 HGGLGSTFAAFDITNAAG 361
           H G  S    F + N  G
Sbjct: 401 HNGQSSPH-EFHVVNTTG 417


>SB_48213| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 167

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 23/78 (29%), Positives = 34/78 (43%)
 Frame = +2

Query: 128 LNLGVIGNQDRLLRSENFVRASMVSSWAHPLTLFAPTGTRINAIRAREVGASQSGSIRLT 307
           ++ G  GN   L   ++    S+      PL+L AP+ TRI A    EV    + ++ L 
Sbjct: 23  IDTGAEGNVIPLSNYKHIYPESLCDIDGKPLSL-APSDTRITAYGGHEVQHYGTCNLTLL 81

Query: 308 HGGLGSTFAAFDITNAAG 361
           H G  S    F + N  G
Sbjct: 82  HNGQSSPH-EFHVVNTTG 98


>SB_44705| Best HMM Match : Ada_Zn_binding (HMM E-Value=8.9)
          Length = 269

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 23/78 (29%), Positives = 34/78 (43%)
 Frame = +2

Query: 128 LNLGVIGNQDRLLRSENFVRASMVSSWAHPLTLFAPTGTRINAIRAREVGASQSGSIRLT 307
           ++ G  GN   L   ++    S+      PL+L AP+ TRI A    EV    + ++ L 
Sbjct: 23  IDTGAEGNVIPLSNYKHIYPESLCDIDGKPLSL-APSDTRITAYGGHEVQHYGTCNLTLL 81

Query: 308 HGGLGSTFAAFDITNAAG 361
           H G  S    F + N  G
Sbjct: 82  HNGQSSPH-EFHVVNTTG 98


>SB_38746| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 365

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 23/78 (29%), Positives = 34/78 (43%)
 Frame = +2

Query: 128 LNLGVIGNQDRLLRSENFVRASMVSSWAHPLTLFAPTGTRINAIRAREVGASQSGSIRLT 307
           ++ G  GN   L   ++    S+      PL+L AP+ TRI A    EV    + ++ L 
Sbjct: 168 IDTGAEGNVIPLSNYKHIYPESLCDIDGKPLSL-APSDTRITAYGGHEVQHYGTCNLTLL 226

Query: 308 HGGLGSTFAAFDITNAAG 361
           H G  S    F + N  G
Sbjct: 227 HNGQSSPH-EFHVVNTTG 243


>SB_27280| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 980

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 23/78 (29%), Positives = 34/78 (43%)
 Frame = +2

Query: 128 LNLGVIGNQDRLLRSENFVRASMVSSWAHPLTLFAPTGTRINAIRAREVGASQSGSIRLT 307
           ++ G  GN   L   ++    S+      PL+L AP+ TRI A    EV    + ++ L 
Sbjct: 226 IDTGAEGNVIPLSNYKHIYPESLCDIDGKPLSL-APSDTRITAYGGHEVQHYGTCNLTLL 284

Query: 308 HGGLGSTFAAFDITNAAG 361
           H G  S    F + N  G
Sbjct: 285 HNGQSSPH-EFHVVNTTG 301


>SB_10660| Best HMM Match : RVP (HMM E-Value=6.5)
          Length = 304

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 23/78 (29%), Positives = 34/78 (43%)
 Frame = +2

Query: 128 LNLGVIGNQDRLLRSENFVRASMVSSWAHPLTLFAPTGTRINAIRAREVGASQSGSIRLT 307
           ++ G  GN   L   ++    S+      PL+L AP+ TRI A    EV    + ++ L 
Sbjct: 27  IDTGAEGNVIPLSNYKHIYPESLCDIDGKPLSL-APSDTRITAYGGHEVQHYGTCNLTLL 85

Query: 308 HGGLGSTFAAFDITNAAG 361
           H G  S    F + N  G
Sbjct: 86  HNGQSSPH-EFHVVNTTG 102


>SB_50299| Best HMM Match : RVT_1 (HMM E-Value=1.5e-25)
          Length = 465

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 23/78 (29%), Positives = 34/78 (43%)
 Frame = +2

Query: 128 LNLGVIGNQDRLLRSENFVRASMVSSWAHPLTLFAPTGTRINAIRAREVGASQSGSIRLT 307
           ++ G  GN   L   ++    S+      PL+L AP+ TRI A    EV    + ++ L 
Sbjct: 27  IDTGAEGNVIPLSNYKHIYPESLCDIDGKPLSL-APSDTRITAYGGHEVQHYGTCNLTLL 85

Query: 308 HGGLGSTFAAFDITNAAG 361
           H G  S    F + N  G
Sbjct: 86  HNGQSSPH-EFHVVNTTG 102


>SB_29085| Best HMM Match : RVT_1 (HMM E-Value=2.6e-26)
          Length = 408

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 23/78 (29%), Positives = 34/78 (43%)
 Frame = +2

Query: 128 LNLGVIGNQDRLLRSENFVRASMVSSWAHPLTLFAPTGTRINAIRAREVGASQSGSIRLT 307
           ++ G  GN   L   ++    S+      PL+L AP+ TRI A    EV    + ++ L 
Sbjct: 23  IDTGAEGNVIPLSNYKHIYPESLCDIDGKPLSL-APSDTRITAYGGHEVQHYGTCNLTLL 81

Query: 308 HGGLGSTFAAFDITNAAG 361
           H G  S    F + N  G
Sbjct: 82  HNGQSSPH-EFHVVNTTG 98


>SB_11912| Best HMM Match : RVT_1 (HMM E-Value=2.6e-26)
          Length = 1329

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 23/78 (29%), Positives = 34/78 (43%)
 Frame = +2

Query: 128 LNLGVIGNQDRLLRSENFVRASMVSSWAHPLTLFAPTGTRINAIRAREVGASQSGSIRLT 307
           ++ G  GN   L   ++    S+      PL+L AP+ TRI A    EV    + ++ L 
Sbjct: 329 IDTGAEGNVIPLSNYKHIYPESLCDIDGKPLSL-APSDTRITAYGGHEVQHYGTCNLTLL 387

Query: 308 HGGLGSTFAAFDITNAAG 361
           H G  S    F + N  G
Sbjct: 388 HNGQSSPH-EFHVVNTTG 404


>SB_4782| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1286

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 23/78 (29%), Positives = 34/78 (43%)
 Frame = +2

Query: 128 LNLGVIGNQDRLLRSENFVRASMVSSWAHPLTLFAPTGTRINAIRAREVGASQSGSIRLT 307
           ++ G  GN   L   ++    S+      PL+L AP+ TRI A    EV    + ++ L 
Sbjct: 268 IDTGAEGNVIPLSNYKHIYPESLCDIDGKPLSL-APSDTRITAYGGHEVQHYGTCNLTLL 326

Query: 308 HGGLGSTFAAFDITNAAG 361
           H G  S    F + N  G
Sbjct: 327 HNGQSSPH-EFHVVNTTG 343


>SB_58621| Best HMM Match : RVT_1 (HMM E-Value=1.5e-25)
          Length = 1238

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 23/78 (29%), Positives = 34/78 (43%)
 Frame = +2

Query: 128 LNLGVIGNQDRLLRSENFVRASMVSSWAHPLTLFAPTGTRINAIRAREVGASQSGSIRLT 307
           ++ G  GN   L   ++    S+      PL+L AP+ TRI A    EV    + ++ L 
Sbjct: 329 IDTGAEGNVIPLSNYKHIYPESLCDIDGKPLSL-APSDTRITAYGGHEVQHYGTCNLTLL 387

Query: 308 HGGLGSTFAAFDITNAAG 361
           H G  S    F + N  G
Sbjct: 388 HNGQSSPH-EFLVVNTTG 404


>SB_2280| Best HMM Match : RVT_1 (HMM E-Value=1.4e-25)
          Length = 1186

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 2/83 (2%)
 Frame = +2

Query: 128 LNLGVIGNQDRLLRSENFVRASMVSSWAHPLTLFAPTGTRINAIRAREVGASQSGSIRLT 307
           ++ G  GN   L   ++    S+      PL+L AP+ TRI A    EV    + ++ L 
Sbjct: 268 IDTGAEGNVIPLSNYKHIYPESLCDIDGKPLSL-APSDTRITAYGGHEVQHYGTCNLTLL 326

Query: 308 HGGLGS--TFAAFDITNAAGRGL 370
           H G  S   F   D T     GL
Sbjct: 327 HNGQSSPHEFHVVDTTGPTILGL 349


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,162,965
Number of Sequences: 59808
Number of extensions: 350831
Number of successful extensions: 599
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1434459094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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