Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_C09
         (786 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_1027| Best HMM Match : Carb_anhydrase (HMM E-Value=0)              120   1e-27
SB_43059| Best HMM Match : No HMM Matches (HMM E-Value=.)             114   9e-26
SB_59634| Best HMM Match : No HMM Matches (HMM E-Value=.)              69   4e-12
SB_28654| Best HMM Match : Carb_anhydrase (HMM E-Value=7.3e-09)        63   2e-10
SB_3617| Best HMM Match : Carb_anhydrase (HMM E-Value=3.4e-15)         60   2e-09
SB_54473| Best HMM Match : DLIC (HMM E-Value=0)                        46   3e-05
SB_16664| Best HMM Match : Carb_anhydrase (HMM E-Value=1.7e-05)        40   0.002
SB_34778| Best HMM Match : Ank (HMM E-Value=0)                         32   0.61 
SB_24276| Best HMM Match : Extensin_2 (HMM E-Value=2.1e-05)            29   3.2  
SB_44424| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.6  
SB_34539| Best HMM Match : SIR2 (HMM E-Value=1.7)                      29   5.6  
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)              28   7.5  
SB_40626| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.5  
SB_57555| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.9  
SB_39796| Best HMM Match : VWA (HMM E-Value=0)                         28   9.9  
SB_25792| Best HMM Match : Extensin_2 (HMM E-Value=1)                  28   9.9  

>SB_1027| Best HMM Match : Carb_anhydrase (HMM E-Value=0)
          Length = 291

 Score =  120 bits (289), Expect = 1e-27
 Identities = 80/246 (32%), Positives = 124/246 (50%), Gaps = 7/246 (2%)
 Frame = +1

Query: 67  YFGIIAVFTLVVINVSVAAG----WGY-RASDQRRWAVLHPACGGRQQSPIAISARQA-I 228
           +F  + VF L  +    AA     W Y  A+    W    P CGG++QSPI I+  +A  
Sbjct: 9   FFFCLIVFILGALERVEAADPMGDWSYDEATGPSTWPNHFPHCGGKKQSPININTEEAKY 68

Query: 229 PISIPAIELIGYQNPLPGPLTITNTGHSVALTIPKYTSEEEKKGFRLPYIF-GGPLDNEY 405
             S+  ++ I Y N     L + + GH++   I   +SE        P++  G  L + Y
Sbjct: 69  DGSLTDLD-IRYPNTTD-VLLVNHHGHAIEADI--LSSE--------PFVATGADLSSRY 116

Query: 406 EIDGLHFHWGDKNNRGSEHTLNDMRLPLEMHIIHRNKKYRNTAEAMQHPDGLCVLAFFYQ 585
            +   HFH G  + +GSEH ++ ++ PLEMH++H N KY N + A    DGL V++  ++
Sbjct: 117 RLAQFHFHVGSSDIQGSEHHIHGVKYPLEMHLVHYNDKYPNASSAQGLLDGLAVISVLFE 176

Query: 586 VVEFDAKLLSPIVKNLTAIENFNSTLQLPHTFSLSSILSGLDTERFYTYKGSLTTPPCAE 765
               D   L+ I+ NL      +  + + +   +  I+   DTE+FY Y GSLTTPPC E
Sbjct: 177 SSSTDNPALNEIIDNLQNASYKDEEITVQNV-PVGKIIP-TDTEKFYRYNGSLTTPPCFE 234

Query: 766 XVTWVI 783
            V W++
Sbjct: 235 TVKWIV 240


>SB_43059| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 722

 Score =  114 bits (274), Expect = 9e-26
 Identities = 66/236 (27%), Positives = 111/236 (47%), Gaps = 2/236 (0%)
 Frame = +1

Query: 82   AVFTLVVINVSVAAGWGYRASDQRRWAVLHPACGGRQQSPI-AISARQAIPISIPAIELI 258
            A+  L ++  S+AA W Y +    +W+     C G  QSPI  I++  A   S+  ++ +
Sbjct: 415  ALVVLSLLGASLAADWDYDSKGPSKWSSSFSQCNGSSQSPIDIITSSVAFDQSLGELQFV 474

Query: 259  GYQN-PLPGPLTITNTGHSVALTIPKYTSEEEKKGFRLPYIFGGPLDNEYEIDGLHFHWG 435
             +   P    +++ N GH+  + +    +           + GG L   Y     H HWG
Sbjct: 475  NFDTIPTGSKISLKNNGHAFQVNMLSAGTFT---------VSGGGLGATYSTVQFHLHWG 525

Query: 436  DKNNRGSEHTLNDMRLPLEMHIIHRNKKYRNTAEAMQHPDGLCVLAFFYQVVEFDAKLLS 615
             KN +GSEH ++       +HI+  N KY N + A+   DGL V+    + V  ++  L 
Sbjct: 526  SKNEQGSEHLIDGKAFAGAIHIVSYNTKYPNISAAVDKSDGLAVVGILLK-VGTESAALK 584

Query: 616  PIVKNLTAIENFNSTLQLPHTFSLSSILSGLDTERFYTYKGSLTTPPCAEXVTWVI 783
              ++N+ ++   N++ +      L  +L     + FY Y+GSLTTP C E VTW +
Sbjct: 585  KFMENIGSVTKVNTSDEFAQPAKLGDLLP--SNKNFYRYQGSLTTPGCQESVTWSV 638


>SB_59634| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 361

 Score = 68.9 bits (161), Expect = 4e-12
 Identities = 32/73 (43%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
 Frame = +1

Query: 376 IFGGPLDNEYEIDGLHFHWGDKNNRGSEHTLNDMRLPLEMHIIHRNKK-YRNTAEAM--Q 546
           I  GPL ++Y+    HFHWG     GSEH ++    P EMHI+H N   Y++ A AM   
Sbjct: 2   ITSGPLSHKYKFAQFHFHWGKDEKEGSEHRVDGKMYPSEMHIVHYNSDLYKDAASAMSSD 61

Query: 547 HPDGLCVLAFFYQ 585
           + DGLCVL  F +
Sbjct: 62  NKDGLCVLGVFLE 74


>SB_28654| Best HMM Match : Carb_anhydrase (HMM E-Value=7.3e-09)
          Length = 252

 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 44/153 (28%), Positives = 66/153 (43%), Gaps = 5/153 (3%)
 Frame = +1

Query: 127 WGYRASDQ---RRWAVLHPACGGRQQSPIAISARQAI-PISIPAIELIGYQN-PLPGPLT 291
           W Y  S       WA  +PAC G  QSPI I     +   S+  ++   +   P    + 
Sbjct: 104 WNYNFSGPIGPDHWANRYPACNGSSQSPINIVTSSVMYDSSLGKLQFNNFDRIPSGAKIM 163

Query: 292 ITNTGHSVALTIPKYTSEEEKKGFRLPYIFGGPLDNEYEIDGLHFHWGDKNNRGSEHTLN 471
           + N GH  A  +   T         L Y+ GG L   +     H H G+ + RG+EH ++
Sbjct: 164 VRNNGH--AFQVNFMTPN-------LFYVHGGGLGANFTTAQFHMHLGEDDTRGAEHLID 214

Query: 472 DMRLPLEMHIIHRNKKYRNTAEAMQHPDGLCVL 570
             R    +HI++ N KY + + A    DGL V+
Sbjct: 215 GQRNAACIHIVNYNTKYPDISTAANKSDGLAVI 247


>SB_3617| Best HMM Match : Carb_anhydrase (HMM E-Value=3.4e-15)
          Length = 338

 Score = 60.5 bits (140), Expect = 2e-09
 Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 4/145 (2%)
 Frame = +1

Query: 157 WAVLHPACGGRQQSPIAISARQAIPISIPAIEL-IGYQNPLPG-PLTITNTGHSVALTIP 330
           WA  +P C G  QSPI I   +   +S P   + I + N   G    ++N G ++   + 
Sbjct: 24  WASAYPECKGLAQSPINIVTSKVTRVSRPFRYMKINFNNYNGGLACFLSNDGKTLDFKV- 82

Query: 331 KYTSEEEKKGFRLPYIFGGPLD--NEYEIDGLHFHWGDKNNRGSEHTLNDMRLPLEMHII 504
                  ++G    +I     D  + Y+++ + FH+G  +  GSEH ++  R P E+ +I
Sbjct: 83  -------RQGLGQAFIDNPVEDPHDRYQLETVRFHFGCNDWLGSEHAVDGRRHPGEIQMI 135

Query: 505 HRNKKYRNTAEAMQHPDGLCVLAFF 579
             N KY N ++A    DGL V+A F
Sbjct: 136 FHNTKYSNVSDAADKSDGLLVVAAF 160



 Score = 34.3 bits (75), Expect = 0.11
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +1

Query: 721 FYTYKGSLTTPPCAEXVTWVI 783
           +Y+YKGS T P C E V W+I
Sbjct: 176 YYSYKGSQTAPACHESVRWII 196


>SB_54473| Best HMM Match : DLIC (HMM E-Value=0)
          Length = 1401

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 22/39 (56%), Positives = 27/39 (69%)
 Frame = +1

Query: 667 LPHTFSLSSILSGLDTERFYTYKGSLTTPPCAEXVTWVI 783
           L   FSL S+L   +T+ F+ YKGSLTTPPC E VTW +
Sbjct: 725 LAQEFSLGSLLPS-NTD-FFRYKGSLTTPPCYESVTWTV 761


>SB_16664| Best HMM Match : Carb_anhydrase (HMM E-Value=1.7e-05)
          Length = 134

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 1/119 (0%)
 Frame = +1

Query: 154 RWAVLHPACGGRQQSPIAISARQAIPISIPAIELIGYQNPLPGPLTITNTGHSVALTIPK 333
           RW   +       QSPI I  +     S     L     P+    T+TN G ++ LT   
Sbjct: 20  RWHKCYIGAEPGHQSPIDIVTKDVTQDSSLG-SLWNTYEPVANS-TLTNDGRTLQLTFAN 77

Query: 334 YTSEEEKKGFRLPYIFGGPLDNEYEIDGLHFHW-GDKNNRGSEHTLNDMRLPLEMHIIH 507
             +           + GGPL +EY++  + FHW   + + GSEH ++     +E++ +H
Sbjct: 78  NNN----------VLSGGPLTDEYQLAMIKFHWAATEESAGSEHMIDSQGHAIEVNALH 126


>SB_34778| Best HMM Match : Ank (HMM E-Value=0)
          Length = 592

 Score = 31.9 bits (69), Expect = 0.61
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = +1

Query: 100 VINVSVAAGWGYRASDQRRWAVLHPACGGRQQSPIAISARQAIPISI 240
           V+   +  G  ++A D R W+ LH AC G   + I +   + + I++
Sbjct: 99  VLEFLLNEGGNFQAEDSRGWSALHHACKGGHSNIIEVLFHKGLDINV 145


>SB_24276| Best HMM Match : Extensin_2 (HMM E-Value=2.1e-05)
          Length = 449

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +1

Query: 625 KNLTAIENFNSTLQLPHTFSLSSILSGLDTERFYTYKGSL 744
           + ++ I+N    L+ P   SL   + G D  RFY YKGS+
Sbjct: 248 RTISDIQNIAYLLEAPGMLSLKRDM-GFDQMRFYCYKGSV 286


>SB_44424| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1350

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = -1

Query: 159  PTSLVGGPISPSCCHRYINNHQGEYSYNTKVLHCYICSLN*IYLID 22
            PT     P    CC   ++   G + YN  + +CY C LN + ++D
Sbjct: 1185 PTQENVSPRGEPCC---VSGSDGSFCYNIPI-YCYDCLLNGLLVVD 1226


>SB_34539| Best HMM Match : SIR2 (HMM E-Value=1.7)
          Length = 1384

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = -1

Query: 159 PTSLVGGPISPSCCHRYINNHQGEYSYNTKVLHCYICSLN*IYLID 22
           PT     P    CC   ++   G + YN  + +CY C LN + ++D
Sbjct: 534 PTQENVSPRGEPCC---VSGSDGSFCYNIPI-YCYDCLLNGLLVVD 575


>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
          Length = 1866

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -1

Query: 216 C*NRYGRLLTAATSRVQYRPTSLVGGPISP 127
           C +   R L  ++ R + RP S+ GGP+SP
Sbjct: 745 CEDDTSRTLLESSKRKEERPHSICGGPLSP 774


>SB_40626| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 979

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 21/75 (28%), Positives = 35/75 (46%)
 Frame = -1

Query: 699 QD*RQGESMRQLQSGVEVLDGR*VLHDRT*ELGIEFHNLIEEREHT*AIRVLHSFRGVSV 520
           +D R G + R + + +E+     +L   T   GI+ HN  E R +   + VL SF  ++ 
Sbjct: 258 RDTRAGCAQRHISANLEIRQTLLLLPVETRCSGIQSHNKTEHRSN---MAVLRSFLLLTA 314

Query: 519 FLIPMDDVHFQRKTH 475
            L   D  + + K H
Sbjct: 315 ILFAADFAYAKNKYH 329


>SB_57555| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 323

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3

Query: 291 DH*YGTFSGIDNPQVHFGRGEERLPS 368
           DH     +G DN QVH  RG+  LPS
Sbjct: 199 DHVSNLDNGRDNDQVHSRRGDNSLPS 224


>SB_39796| Best HMM Match : VWA (HMM E-Value=0)
          Length = 2119

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 20/75 (26%), Positives = 33/75 (44%)
 Frame = +2

Query: 374  TSLEVP*TTSMRSMVCISTGVTRTTEDRSTH*TICVFLWKCTSSIGIRNTETPRKLCSTL 553
            T+ EV   T + +   +ST V   T   STH T        T ++    TET   +  T 
Sbjct: 1785 TATEVTTATQVTTETAVSTAVQTLT---STHVTTATNTRNATLTLTHHKTETSTAVAMTT 1841

Query: 554  MAYVCSRSSIRLWNS 598
            + +  + +++ L NS
Sbjct: 1842 VPHTVTTTAVALVNS 1856


>SB_25792| Best HMM Match : Extensin_2 (HMM E-Value=1)
          Length = 440

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +1

Query: 259 GYQNPLPGPLTITNTGHSVALTIPKYTSEEE 351
           G Q+PL G   I     SVA+ IPK T   E
Sbjct: 193 GRQSPLHGDHAIQKATQSVAIPIPKITRSSE 223


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,895,786
Number of Sequences: 59808
Number of extensions: 583009
Number of successful extensions: 1417
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1408
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2155861620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)