Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_B24
(563 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18298| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.023
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 36 0.030
SB_26831| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.092
SB_34347| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.28
SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06) 31 0.86
SB_3044| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.86
SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_19137| Best HMM Match : Pox_A_type_inc (HMM E-Value=3e-05) 30 1.1
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_30512| Best HMM Match : GLTT (HMM E-Value=0.00058) 29 2.6
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 29 2.6
SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_24885| Best HMM Match : HOOK (HMM E-Value=0.00023) 29 3.5
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_26376| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_8764| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_42045| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_35042| Best HMM Match : S-antigen (HMM E-Value=3) 27 8.0
SB_25470| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
SB_11461| Best HMM Match : NHL (HMM E-Value=0) 27 8.0
>SB_18298| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 35.9 bits (79), Expect = 0.023
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Frame = +1
Query: 265 EVAKARQHIKNSLECMDSVATLAGVPNTELSTKVISL--ENENKDLKKAIDDLRNLVISL 438
++AK R+ + +L D+ L + T+L + SL E EN+ LKK DL+ + L
Sbjct: 120 DIAKPRRKLTRTLSLPDN--ELHQIDATDLHERFTSLQLEQENRSLKKLTSDLQEALEKL 177
Query: 439 QVRVETLESSSSITSDCIQ-VQSEKPAAAST 528
+ +V ++ I D + Q P A T
Sbjct: 178 EEKVNDMQRGERIERDSLDGFQISAPPAKPT 208
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 35.5 bits (78), Expect = 0.030
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +1
Query: 265 EVAKARQHIKN-SLECMDSVATLAGV-PN-TELSTKVISLENENKDLKKAIDDLRNLVIS 435
++A R + N + E D ++ LA P +L K+ +N LK IDDLRN + S
Sbjct: 2283 DLAALRNEMDNMNAEKRDHMSELARAQPQIADLENKLQDAREQNSRLKIEIDDLRNKLSS 2342
Query: 436 LQVRVETLESSSSITSD 486
+ R E +E+ ++I D
Sbjct: 2343 AKSRYERVETETTIVRD 2359
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +1
Query: 346 TELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLES 465
+E +N+N +K IDDL+N + L+ ++ L++
Sbjct: 529 SEAQRNAEKFKNDNVRKQKTIDDLKNTIAQLEDKINALDN 568
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +1
Query: 289 IKNSLECMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLE 462
+KN L + A + E T + SL+ E DL ID+LR+ +++ + +++ E
Sbjct: 692 LKNKLSEAERQAAATQRESVEKDTTIDSLKKEIDDLNNEIDELRSDLMNTKSLLQSSE 749
>SB_26831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 932
Score = 33.9 bits (74), Expect = 0.092
Identities = 20/76 (26%), Positives = 39/76 (51%)
Frame = +1
Query: 283 QHIKNSLECMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLE 462
Q +K +LE V E+S+ + EN+ ++K + + + + +L+++VE LE
Sbjct: 748 QQLKENLENGQEVLKRKDTTIQEISSALKEAENKLSGVEKQMAEKSSSINALELKVEDLE 807
Query: 463 SSSSITSDCIQVQSEK 510
+S CI+ + EK
Sbjct: 808 ASIQEQLVCIKAKKEK 823
>SB_34347| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 508
Score = 32.3 bits (70), Expect = 0.28
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +1
Query: 376 ENENKDLKKAIDDLRNLVISLQVRVETLESSSSITSDCIQVQSEKPA 516
E E KDLKK I L + + +L+ +V T+++S + ++E+PA
Sbjct: 134 EEEVKDLKKTISKLHSEISALKKQVGTIKTSLEFLETSVINEAEEPA 180
>SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06)
Length = 1292
Score = 30.7 bits (66), Expect = 0.86
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = +1
Query: 280 RQHIKNSLECMDSVATL--AGVPNTELSTKVISLENENKDLK-KAIDDLRNLVISLQVRV 450
R+ + +S++ D VA L A T+ +V++ + ++ KAI L N V SLQ ++
Sbjct: 549 REKLSSSVQIHDKVAELEQALKAKTDELDQVLACQKGKDEVHDKAIAHLTNEVTSLQKQI 608
Query: 451 ETLESSSSITSDCIQ 495
+ LE +S S ++
Sbjct: 609 DILEDNSQSESSMVE 623
>SB_3044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 30.7 bits (66), Expect = 0.86
Identities = 19/78 (24%), Positives = 33/78 (42%)
Frame = +1
Query: 274 KARQHIKNSLECMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVE 453
K R+ +KN + T E+ ++ LE ENK L I+D + + L+
Sbjct: 477 KDREDLKNECLALSETVTKIANEKREMEKEIEKLEEENKKLVSEINDFKVNIQKLESLKG 536
Query: 454 TLESSSSITSDCIQVQSE 507
E + S I++ S+
Sbjct: 537 EKEELDNAHSKIIEMYSD 554
>SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3212
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/57 (24%), Positives = 30/57 (52%)
Frame = +1
Query: 343 NTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLESSSSITSDCIQVQSEKP 513
N +L ++ + EN++L+ ++ + + ++ +ET SSSITS + + P
Sbjct: 1985 NAKLKVELKDINVENEELQSQLELTKEELTRVEALLETYRKSSSITSSTPSILQKSP 2041
>SB_19137| Best HMM Match : Pox_A_type_inc (HMM E-Value=3e-05)
Length = 462
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 349 ELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETL 459
+L ++ +SLE ENK LK I+DL +L+ R L
Sbjct: 139 KLESEKLSLERENKKLKHQIEDLESLLSHKTARATKL 175
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 373 LENENKDLKKAIDDLRNLVISLQVRVETLESSSSITSDCIQVQSEK 510
L E KDL K I+DL+ + L++ + TL+ + S K
Sbjct: 257 LNQEKKDLVKKINDLKKRITELELIINTLKDEKEALEQDVNSMSYK 302
>SB_30512| Best HMM Match : GLTT (HMM E-Value=0.00058)
Length = 1083
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 355 STKVISLENENKDLKKAIDDLRNLVISLQVRVETLESSSSITSDCIQ 495
S K LE EN DL++++ + + + SLQ R LE + IQ
Sbjct: 283 SEKYKLLEKENADLRQSVSETQEVANSLQNRNSLLEREKQSLEENIQ 329
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 349 ELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLESSSS 474
+L KV +EN+ L +DDLR + Q +++LE +S+
Sbjct: 3043 DLHGKVSQKNSENELLHAQLDDLRKQITGYQGNIKSLEENSN 3084
>SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1805
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +1
Query: 370 SLENENKDLKKAIDDLRNLVISL-QVRVETLESSSSITSDCIQVQSEKPAAAS 525
SLE +NKDLK+ + DL + S ++ + +LES + + + +++++ A S
Sbjct: 1627 SLEKQNKDLKQKLADLESSTRSRHKMAIASLESKLTNMQEQLDLETKERALQS 1679
>SB_24885| Best HMM Match : HOOK (HMM E-Value=0.00023)
Length = 873
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 304 ECMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLR 420
E M+ A L + E S V+ L +N+ LKK+++DLR
Sbjct: 352 EVMEENAQLV-IDKQESSMDVLRLSQQNQHLKKSLEDLR 389
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +1
Query: 352 LSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLESSSSITSDCIQVQSEK 510
L K+ +LENEN+DL K +L ++ + E ++ T +++ EK
Sbjct: 2830 LLEKIEALENENRDLVKQCKELSRNLLERRRETEAVKKEMVATEKKVKLFLEK 2882
>SB_26376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1018
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +1
Query: 373 LENENKDLKKAIDDLRNLVISLQVRVETLESSSSITSDCIQVQSEK 510
L N+ + AID LRN+V+ LQ E L+++ T++ I+ ++ K
Sbjct: 472 LNNQIEKGGGAIDSLRNMVLDLQAENEKLKNT---TNELIEEENRK 514
>SB_8764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 373 LENENKDLKKAIDDLRNLVISLQVRVETLES 465
LE +N+DL K + D+R V LQ + E +++
Sbjct: 6 LEGQNEDLVKKMSDMRTRVRELQEQQENMQN 36
>SB_42045| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 356
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = +2
Query: 215 CRRSK-HHYR*LDHHWPVKSQ 274
CRRS HH+R WP+KSQ
Sbjct: 239 CRRSALHHWRARKRCWPIKSQ 259
>SB_35042| Best HMM Match : S-antigen (HMM E-Value=3)
Length = 165
Score = 27.5 bits (58), Expect = 8.0
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Frame = +1
Query: 382 ENKDLKKA------IDDLRNLVISLQVRVETLESSSSITSDCIQVQSEKPAAA 522
EN DL KA + D ++VIS QV + +S SD ++S+KP+++
Sbjct: 51 ENNDLSKAPSSDSDVKDKLDIVISSQVENPIIADKNSGLSDESSLESKKPSSS 103
>SB_25470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/56 (21%), Positives = 32/56 (57%)
Frame = +1
Query: 352 LSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLESSSSITSDCIQVQSEKPAA 519
+ ++ +L+ EN++LKK+++ + +I+++ + ++ S + + EK AA
Sbjct: 62 MKKQIYTLKQENQELKKSLEFSQEEIITIKEEFKMADTKLEEMSSQVSLLEEKLAA 117
>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2672
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 361 KVISLENENKDLKKAIDDLRNLVISLQVRVE-TLESS 468
K+ LEN KD+++ I++ +N+++S R E L SS
Sbjct: 825 KINELENAKKDIERGIEEEKNILMSEARRKEHALHSS 861
>SB_11461| Best HMM Match : NHL (HMM E-Value=0)
Length = 819
Score = 27.5 bits (58), Expect = 8.0
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +1
Query: 397 KKAIDDLRNLVISLQVRVETLESSSSITSDCI 492
+KA+DD+R++ + ++ R E + DCI
Sbjct: 237 QKALDDIRSIHVEIRHRTEEMIKLEDFVHDCI 268
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,939,797
Number of Sequences: 59808
Number of extensions: 262318
Number of successful extensions: 625
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1325051197
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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