Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_B13
(754 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 2e-07
SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_46661| Best HMM Match : Ferritin (HMM E-Value=0.18) 41 0.001
SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10) 36 0.035
SB_19839| Best HMM Match : Ery_res_leader2 (HMM E-Value=9.9) 34 0.14
SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29) 33 0.25
SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012) 33 0.33
SB_6832| Best HMM Match : HLH (HMM E-Value=2.4e-14) 30 1.8
SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05) 29 3.1
SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032) 29 3.1
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 29 5.4
SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8) 28 7.1
SB_12078| Best HMM Match : Ubie_methyltran (HMM E-Value=0.17) 28 7.1
SB_4417| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_35963| Best HMM Match : Cadherin (HMM E-Value=0) 28 9.4
SB_34907| Best HMM Match : Cadherin (HMM E-Value=0) 28 9.4
SB_18191| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_10903| Best HMM Match : Aldolase_II (HMM E-Value=9.1e-17) 28 9.4
SB_39606| Best HMM Match : DUF164 (HMM E-Value=0.47) 28 9.4
>SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 64.1 bits (149), Expect = 1e-10
Identities = 44/144 (30%), Positives = 72/144 (50%)
Frame = +2
Query: 269 SLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSS 448
+L L SY YL A +F+ GF K F K S + E L+K +RGG++
Sbjct: 208 NLELYASYAYLSMAFHFDRDDVALPGFHKYFLKASHEEREHAEKLMKFQNERGGRIVLQD 267
Query: 449 HTTLKGDKGSNYTVEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYI 628
+ D E G + ++ ALD +K + + + +H+ K+ D A++T +I
Sbjct: 268 IKKPEKD-------EWGCGMDSIQVALDLEKHVNQALLDLHKIAEKHGD----AQMTDFI 316
Query: 629 EEEFVSXQADTIRXLAGHTSDLKR 700
E F++ Q + I+ LAGH ++LKR
Sbjct: 317 EGNFLTEQVEAIKELAGHLTNLKR 340
Score = 49.6 bits (113), Expect = 3e-06
Identities = 31/131 (23%), Positives = 64/131 (48%)
Frame = +2
Query: 308 ASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKGDKGSNYT 487
A++F + GFA F+K +++ + ++ + KRGG++ H +K +
Sbjct: 1 AAHFGRDDIHLPGFAAFFKKAAEEEYTHAHMFMEFLNKRGGRVKL--HHIMKPCRD---- 54
Query: 488 VEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSXQADTIR 667
G+ + A+ AL +K++ + +H+ N D ++ ++E F+ Q D+I+
Sbjct: 55 -HWGNGLMAMRDALYLEKEINHALLDLHQVADTN----RDPQVQDFLESNFLGEQVDSIK 109
Query: 668 XLAGHTSDLKR 700
LA + S L+R
Sbjct: 110 TLANYVSTLQR 120
>SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 56.4 bits (130), Expect = 2e-08
Identities = 39/144 (27%), Positives = 71/144 (49%)
Frame = +2
Query: 269 SLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSS 448
+L L SY Y+ A +F+ GF K F K S + E L K +RGG++
Sbjct: 140 NLELYASYVYMSMAYHFDRDDVALPGFHKYFMKASHEEREHAEKLAKFQLQRGGRIVLQD 199
Query: 449 HTTLKGDKGSNYTVEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYI 628
+K + ++ G A+ ALD +K + + + +H+ K+ D +++ ++
Sbjct: 200 ---IKRPERDDW----GCGQDAIQAALDLEKHVNQALLDLHKVAEKHGD----SQMQDWL 248
Query: 629 EEEFVSXQADTIRXLAGHTSDLKR 700
E +++ Q + I+ LAGH ++LKR
Sbjct: 249 ESHYLTEQVEAIKELAGHLTNLKR 272
>SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 53.6 bits (123), Expect = 2e-07
Identities = 37/144 (25%), Positives = 72/144 (50%)
Frame = +2
Query: 269 SLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSS 448
+L L SY Y+ A +F+ GF K F + S + E L K +RGG++
Sbjct: 155 NLELYASYVYMSMAFHFDRDDVALPGFHKYFMEASHEEREHAEKLAKFQLQRGGRIVLQD 214
Query: 449 HTTLKGDKGSNYTVEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYI 628
+K + ++ G ++ + ALD +K + + + +H+ K+ D +++ ++
Sbjct: 215 ---IKRPERDDWGC--GQDV--IQAALDLEKHVNQALHDLHKVAEKHGD----SQMQDWL 263
Query: 629 EEEFVSXQADTIRXLAGHTSDLKR 700
E +++ Q + I+ LAGH ++LKR
Sbjct: 264 ESHYLTEQVEAIKELAGHMTNLKR 287
>SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 43.2 bits (97), Expect = 2e-04
Identities = 37/144 (25%), Positives = 66/144 (45%)
Frame = +2
Query: 269 SLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSS 448
+L L SY Y A YF+ + GF K F+K + + E
Sbjct: 21 NLELYASYVYTSMACYFDREDVHLPGFHKFFKKQAHEERE-------------------- 60
Query: 449 HTTLKGDKGSNYTVEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYI 628
H K ++ E G + A+ ALD +K + + + + + KN D A+++ +I
Sbjct: 61 HAEKKPERD-----EWGSGLEAMQTALDLEKHVNQALIELEKTAEKNGD----AQMSDFI 111
Query: 629 EEEFVSXQADTIRXLAGHTSDLKR 700
E+ F++ Q ++IR L+G+ + LK+
Sbjct: 112 EDHFLTEQVESIRELSGYIAVLKK 135
>SB_46661| Best HMM Match : Ferritin (HMM E-Value=0.18)
Length = 88
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/68 (29%), Positives = 41/68 (60%)
Frame = +2
Query: 497 GHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSXQADTIRXLA 676
G+ + A+ AL +K++ + +HR+ + +D A++ +IEE F++ Q D+I+ L+
Sbjct: 8 GNGLMAMEDALALEKEILSSLQALHRKAQEEND----AQMQDFIEETFLNEQMDSIKQLS 63
Query: 677 GHTSDLKR 700
+ S L+R
Sbjct: 64 NYVSTLRR 71
>SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10)
Length = 155
Score = 35.9 bits (79), Expect = 0.035
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +2
Query: 77 IASNMKVYALIVACLALGVLAEEDSCYQNVDQGCRRTLSLPHCSAYYGQFKDNH 238
++S+MK L++AC ++ E+D C + D GC + L CS YY Q D H
Sbjct: 46 MSSDMKSLVLLIACFSVARATEDDFCKER-DAGC--YVDLKDCSKYY-QCDDFH 95
>SB_19839| Best HMM Match : Ery_res_leader2 (HMM E-Value=9.9)
Length = 117
Score = 33.9 bits (74), Expect = 0.14
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +1
Query: 97 VCSHRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVLR 219
V SH LSG GC G+GR + E++ R +A LQ +LR
Sbjct: 56 VWSHLHLSGGGC-GKGRHLPKEKQSRGSPPISAALLQHILR 95
>SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29)
Length = 339
Score = 33.1 bits (72), Expect = 0.25
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +2
Query: 89 MKVYALIVACLALGVLAEEDSCYQNVDQGCRRTLSLPHCSAYYGQFKDNH 238
MK L++AC ++ E+D C + D GC + L CS YY Q D H
Sbjct: 1 MKSLVLLIACFSVARATEDDYCKER-DAGC--YVDLKDCSKYY-QCDDFH 46
>SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012)
Length = 126
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 290 YHYLLSASYFNNYQTNREGFAKLFRKLSDDSWE 388
Y YL A +F+ N GF K F+K S + WE
Sbjct: 50 YTYLSMAFHFDRDDINLPGFNKFFKKASKEEWE 82
>SB_6832| Best HMM Match : HLH (HMM E-Value=2.4e-14)
Length = 189
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = -1
Query: 619 SDLSIVEEVAVFSDFPVDEENPLGKLLLRVQ 527
SDL +E FSDF ++E LGKL LR++
Sbjct: 137 SDLDDLETDFTFSDFSLEEFPELGKLALRIK 167
>SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05)
Length = 3397
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 8/58 (13%)
Frame = +2
Query: 572 REVTKNSDLLHDAEITQYIE--------EEFVSXQADTIRXLAGHTSDLKRFITXNNG 721
+EVT N+ L D +TQ E EE+V IR + T +KR+IT +NG
Sbjct: 182 QEVT-NAVTLQDQPVTQSFEPTSEEEKVEEYVDEYGHVIRCITRRTLVIKRYITDDNG 238
>SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032)
Length = 521
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 537 RSSLPRGFSSSTGKSLKTATSSTMLRSLNTSRRNS 641
++SL +S SLKT+ ++M SL TSRR S
Sbjct: 154 KTSLKTSLKASLKTSLKTSLKTSMKTSLKTSRRTS 188
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +3
Query: 522 KPWTRRSSLPRGFSSSTGKSLKTATSSTMLRSLNTSRRNS 641
KP R+SS SSS+G S +++SST S +SR +S
Sbjct: 1005 KPARRQSSSSSSSSSSSGSSSYSSSSSTGSSSSGSSRSSS 1044
>SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8)
Length = 360
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 531 TRRSSLPRGFSSSTGKSLKTATSSTMLRSLNTSRRNS 641
+R++SL R +S SLKT+ + +S NTS + S
Sbjct: 117 SRKTSLKRSLKTSPKTSLKTSRKTDRKKSRNTSPKRS 153
>SB_12078| Best HMM Match : Ubie_methyltran (HMM E-Value=0.17)
Length = 237
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 374 DDSWEKTIGLIKHVTKRGGKMDFSSHTTLKGD 469
+DS ++ +G +K V K GG+ F H K D
Sbjct: 160 EDSLDQLLGEVKRVLKPGGRFYFIEHIADKSD 191
>SB_4417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +2
Query: 491 EVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEIT 619
E+G ++ L+KAL +++LA +I + E T NS ++ E T
Sbjct: 458 ELGRQVQELSKALSLKQELANKI--MQNEGTMNSKMIKQYEDT 498
>SB_35963| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 864
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +2
Query: 500 HEIGALAKALDTQKQLAERIFFIHRE---VTKNSDLLHDAEITQYI 628
+EI + +ALDT Q A R+F I + VTKN + D E Y+
Sbjct: 58 NEIYSFFRALDTASQSALRLFDISEDGVVVTKNPLVYTDGEENLYV 103
>SB_34907| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 697
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +2
Query: 500 HEIGALAKALDTQKQLAERIFFIHRE---VTKNSDLLHDAEITQYI 628
+EI + +ALDT Q A R+F I + VTKN + D E Y+
Sbjct: 54 NEIYSFFRALDTASQSALRLFDISEDGVVVTKNPLVYTDGEENLYV 99
>SB_18191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1008
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 266 ASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDD 379
+++ L HYL S + F NYQ +G LF++ D+
Sbjct: 326 STILLNAGLHYLESTN-FTNYQRLIDGIVLLFKRAKDE 362
>SB_10903| Best HMM Match : Aldolase_II (HMM E-Value=9.1e-17)
Length = 280
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 88 YEGVCSHRCLSGSGCAGRGRLML 156
+EGVC+H + G G GR+ML
Sbjct: 63 HEGVCNHLSMMAPGKHGTGRVML 85
>SB_39606| Best HMM Match : DUF164 (HMM E-Value=0.47)
Length = 626
Score = 27.9 bits (59), Expect = 9.4
Identities = 21/82 (25%), Positives = 34/82 (41%)
Frame = +1
Query: 190 KSAALQRVLRPIQGQPRCSERTEGISLTVFETFLPLSPVGLLLQQLPDEQGRIREALQEI 369
+S + R PI G+ R G + + PLSP ++ D R R LQ +
Sbjct: 119 RSKSPVRSTSPILGRSSSPSRRGGSPSRILNSS-PLSPSKQVVDGDNDTVQRQRRELQLL 177
Query: 370 IGRFVGENHWSHKARH*EGWED 435
IG + +SH + W++
Sbjct: 178 IGELKDRDRFSHWKKDVRDWKE 199
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,086,949
Number of Sequences: 59808
Number of extensions: 441623
Number of successful extensions: 1162
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1158
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2046258890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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