Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0100
(672 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 155 3e-38
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 154 7e-38
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 153 2e-37
SB_56| Best HMM Match : Actin (HMM E-Value=0) 153 2e-37
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 152 2e-37
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 151 7e-37
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 137 9e-33
SB_54| Best HMM Match : Actin (HMM E-Value=0) 68 8e-12
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 48 5e-06
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 48 9e-06
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_10793| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 29 4.5
SB_57640| Best HMM Match : DUF632 (HMM E-Value=2.8) 28 6.0
SB_45941| Best HMM Match : DUF632 (HMM E-Value=2.8) 28 6.0
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 28 6.0
SB_25622| Best HMM Match : Phage_Treg (HMM E-Value=2.1) 28 6.0
SB_665| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 155 bits (376), Expect = 3e-38
Identities = 70/75 (93%), Positives = 74/75 (98%)
Frame = -1
Query: 507 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 328
GGTTMYPG+ADRMQKEI+ALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+
Sbjct: 275 GGTTMYPGLADRMQKEISALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 334
Query: 327 EYDESGPGIVHRKCF 283
EYDESGP IVHRKCF
Sbjct: 335 EYDESGPAIVHRKCF 349
Score = 106 bits (254), Expect = 2e-23
Identities = 48/51 (94%), Positives = 48/51 (94%)
Frame = -2
Query: 671 QVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYAN 519
QVITIGNERFRCPEAL QPSFLGMES GIHET YNSIMKCDVDIRKDLYAN
Sbjct: 220 QVITIGNERFRCPEALLQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYAN 270
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 154 bits (373), Expect = 7e-38
Identities = 70/75 (93%), Positives = 73/75 (97%)
Frame = -1
Query: 507 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 328
GGTTMYPGIADRMQKEI+ALAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+
Sbjct: 264 GGTTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 323
Query: 327 EYDESGPGIVHRKCF 283
EYDESGP IVHRKCF
Sbjct: 324 EYDESGPAIVHRKCF 338
Score = 108 bits (259), Expect = 5e-24
Identities = 48/51 (94%), Positives = 49/51 (96%)
Frame = -2
Query: 671 QVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYAN 519
QVITIGNERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDIRKDLYAN
Sbjct: 209 QVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYAN 259
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 153 bits (370), Expect = 2e-37
Identities = 69/75 (92%), Positives = 73/75 (97%)
Frame = -1
Query: 507 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 328
GG+TMYPGIADRMQKEIT+LAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+
Sbjct: 302 GGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 327 EYDESGPGIVHRKCF 283
EYDESGP IVHRKCF
Sbjct: 362 EYDESGPSIVHRKCF 376
Score = 108 bits (259), Expect = 5e-24
Identities = 48/51 (94%), Positives = 49/51 (96%)
Frame = -2
Query: 671 QVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYAN 519
QVITIGNERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDIRKDLYAN
Sbjct: 247 QVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYAN 297
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 153 bits (370), Expect = 2e-37
Identities = 69/75 (92%), Positives = 73/75 (97%)
Frame = -1
Query: 507 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 328
GG+TMYPGIADRMQKEIT+LAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+
Sbjct: 301 GGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360
Query: 327 EYDESGPGIVHRKCF 283
EYDESGP IVHRKCF
Sbjct: 361 EYDESGPSIVHRKCF 375
Score = 108 bits (259), Expect = 5e-24
Identities = 48/51 (94%), Positives = 49/51 (96%)
Frame = -2
Query: 671 QVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYAN 519
QVITIGNERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDIRKDLYAN
Sbjct: 246 QVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYAN 296
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 152 bits (369), Expect = 2e-37
Identities = 69/75 (92%), Positives = 73/75 (97%)
Frame = -1
Query: 507 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 328
GG+TMYPGIADRMQKEI+ALAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+
Sbjct: 302 GGSTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 327 EYDESGPGIVHRKCF 283
EYDESGP IVHRKCF
Sbjct: 362 EYDESGPSIVHRKCF 376
Score = 108 bits (259), Expect = 5e-24
Identities = 48/51 (94%), Positives = 49/51 (96%)
Frame = -2
Query: 671 QVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYAN 519
QVITIGNERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDIRKDLYAN
Sbjct: 247 QVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYAN 297
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 151 bits (365), Expect = 7e-37
Identities = 68/75 (90%), Positives = 73/75 (97%)
Frame = -1
Query: 507 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 328
GG+TM+PGIADRMQKEI+ALAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+
Sbjct: 301 GGSTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360
Query: 327 EYDESGPGIVHRKCF 283
EYDESGP IVHRKCF
Sbjct: 361 EYDESGPSIVHRKCF 375
Score = 108 bits (259), Expect = 5e-24
Identities = 48/51 (94%), Positives = 49/51 (96%)
Frame = -2
Query: 671 QVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYAN 519
QVITIGNERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDIRKDLYAN
Sbjct: 246 QVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYAN 296
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 137 bits (331), Expect = 9e-33
Identities = 61/75 (81%), Positives = 69/75 (92%)
Frame = -1
Query: 507 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 328
GG+TM+PGIADRMQKEI LA +++K+K+IAPPERKYSVWIGGSILASLSTFQQMWI+KE
Sbjct: 75 GGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSILASLSTFQQMWIAKE 134
Query: 327 EYDESGPGIVHRKCF 283
EY E GP IVHRKCF
Sbjct: 135 EYHEYGPPIVHRKCF 149
Score = 99.1 bits (236), Expect = 3e-21
Identities = 42/51 (82%), Positives = 48/51 (94%)
Frame = -2
Query: 671 QVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYAN 519
QVI+IGNERFRCPEA+FQP+FLGME+ GIHE +YN IMKCDVDIRKDLY+N
Sbjct: 20 QVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIRKDLYSN 70
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 67.7 bits (158), Expect = 8e-12
Identities = 29/51 (56%), Positives = 38/51 (74%)
Frame = -2
Query: 671 QVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYAN 519
Q I IG+ERFR E LFQPS LG + GIHE+++ SI KCD+D+R +L+ N
Sbjct: 2291 QSIRIGSERFRAAEPLFQPSLLGRDIDGIHESIFKSIKKCDIDLRAELFHN 2341
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 53.2 bits (122), Expect = 2e-07
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = -2
Query: 671 QVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLY 525
+V+ + ERF PEALFQP + +E G+ E ++N+I D+D R + Y
Sbjct: 250 RVVKLSGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFY 298
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/42 (40%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Frame = -1
Query: 432 KIKIIAPPERKYSVWIGGSILAS-LSTFQQMWISKEEYDESG 310
KI+I PP RK+ V++GG++LA + W++++EY+E G
Sbjct: 358 KIRIEDPPRRKHMVFMGGAVLADIMKDKDSFWMTRKEYEEKG 399
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 48.4 bits (110), Expect = 5e-06
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = -1
Query: 450 LAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 283
+ P I+ ++I+ ++Y+VW GGS+LAS F + +K +YDE GP I F
Sbjct: 285 IKPKPIETQVISHHMQRYAVWFGGSMLASTPEFYSVCHTKADYDEHGPSICRHNPF 340
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -2
Query: 665 ITIGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYAN 519
+ + ERF PE F P F + + + E V N I C +D+R+ LY N
Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLYKN 245
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 47.6 bits (108), Expect = 9e-06
Identities = 20/52 (38%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Frame = -1
Query: 507 GGTTMYPGIADRMQKEITALAPSTIKIKIIA---PPERKYSVWIGGSILASL 361
GG T+ G +R+ +E+ + P ++++K+I+ E++++ WIGGSILASL
Sbjct: 179 GGNTLLQGFVERLNRELVSKTPPSMRLKLISNNSSVEKRFNPWIGGSILASL 230
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 37.9 bits (84), Expect = 0.007
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Frame = -1
Query: 510 VGGTTMYPGIADRMQKEITALAPST-------IK-IKIIAPP-ERKYSVWIGGSILASLS 358
+GGT M PG R+ +EI L S IK +K+ PP + W+GG+I SL
Sbjct: 84 IGGTAMTPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQPPVNANITAWLGGAIFGSLE 143
Query: 357 TFQQMWISKEEYDE 316
++E Y +
Sbjct: 144 VLADRSTTRERYQQ 157
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 32.7 bits (71), Expect = 0.28
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -2
Query: 635 PEALFQPSFLGMESCGIHETV 573
PE +FQPS LG+E GI ET+
Sbjct: 3 PEIIFQPSMLGLEQAGITETM 23
>SB_10793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/53 (32%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Frame = -3
Query: 523 PTPSCRWY--HHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVLRMDRWIHP 371
PTP R + HH PRY + P H PR MD+ HP
Sbjct: 345 PTPWTRVHIQHHGPRYTSHTMDQGTHPTIRTKVHIQHHGPRYTSNTMDQGTHP 397
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3
Query: 484 YRRQDAEGDHRPRALDHQDQDHRSPREE 401
+RRQDA DHR + DH QD PR++
Sbjct: 664 HRRQDA--DHRRQDADHHRQDVVHPRQD 689
>SB_57640| Best HMM Match : DUF632 (HMM E-Value=2.8)
Length = 560
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = -1
Query: 582 RDRVQLHHEVRRRHP*GPVRQHRHVGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPER 403
++ VQL HEV R+H P+ V G T+ +D + + P +++ PP+
Sbjct: 93 KENVQLLHEVLRQHTEKPIFMQEQVHGVTL---SSDAVDSKSDLAVPESVE-----PPQS 144
Query: 402 KYSVW 388
W
Sbjct: 145 PVRTW 149
>SB_45941| Best HMM Match : DUF632 (HMM E-Value=2.8)
Length = 688
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = -1
Query: 582 RDRVQLHHEVRRRHP*GPVRQHRHVGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPER 403
++ VQL HEV R+H P+ V G T+ +D + + P +++ PP+
Sbjct: 137 KENVQLLHEVLRQHTEKPIFMQEQVHGVTL---SSDAVDSKSDLAVPESVE-----PPQS 188
Query: 402 KYSVW 388
W
Sbjct: 189 PVRTW 193
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 374 MDPPIHTEYFLSGGAMILILMVEGARAVISFCILSAIPGYMVVPP 508
+DPP+ +Y L+GG ++ ++ FCI G++V P
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCIFQ---GFVVPTP 799
>SB_25622| Best HMM Match : Phage_Treg (HMM E-Value=2.1)
Length = 329
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 498 WYHRHDGVGVQVLTDVDVALHDGVVHGLVDAARFHTQEGRLEES 629
+Y DGV ++V V +A+H GV +G V A QE ES
Sbjct: 38 YYLNFDGVSIRVCKKVFLAIH-GVPYGRVSRAVIKLQEKGTPES 80
>SB_665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +2
Query: 464 FCILSAIPGYMVVPPT*RCWRTGP 535
FC PG + +P CW+ GP
Sbjct: 32 FCCTVERPGLLTIPDDYTCWKVGP 55
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,645,015
Number of Sequences: 59808
Number of extensions: 378514
Number of successful extensions: 1266
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1259
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1721264831
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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