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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0047
         (284 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_41893| Best HMM Match : No HMM Matches (HMM E-Value=.)              38   0.002
SB_27417| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)               32   0.085
SB_12021| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.085
SB_57695| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   0.26 
SB_57686| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   0.45 
SB_4196| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   0.79 
SB_58033| Best HMM Match : HSA (HMM E-Value=3.2)                       27   1.8  
SB_52265| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   2.4  
SB_50916| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   2.4  
SB_20905| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   2.4  
SB_13724| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   2.4  
SB_8277| Best HMM Match : DUF827 (HMM E-Value=1.7)                     27   2.4  
SB_55215| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.0003)        27   2.4  
SB_51968| Best HMM Match : PT (HMM E-Value=0.54)                       27   2.4  
SB_105| Best HMM Match : No HMM Matches (HMM E-Value=.)                27   3.2  
SB_31780| Best HMM Match : Pkinase (HMM E-Value=0)                     27   3.2  
SB_24257| Best HMM Match : DUF583 (HMM E-Value=0.16)                   27   3.2  
SB_37312| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   4.2  
SB_55223| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   4.2  
SB_51727| Best HMM Match : RasGEF_N (HMM E-Value=7.8)                  26   4.2  
SB_18| Best HMM Match : OAR (HMM E-Value=0.92)                         26   4.2  
SB_18006| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   5.6  
SB_6888| Best HMM Match : No HMM Matches (HMM E-Value=.)               26   5.6  
SB_42222| Best HMM Match : ig (HMM E-Value=2.1e-17)                    26   5.6  
SB_40594| Best HMM Match : Extensin_2 (HMM E-Value=0.083)              26   5.6  
SB_25347| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   5.6  
SB_44329| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   7.4  
SB_21299| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   7.4  
SB_17711| Best HMM Match : HECT (HMM E-Value=4.9)                      25   7.4  
SB_7296| Best HMM Match : PHD (HMM E-Value=0.0013)                     25   7.4  
SB_51278| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   9.8  
SB_49646| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   9.8  
SB_48437| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   9.8  
SB_37245| Best HMM Match : Disintegrin (HMM E-Value=7.9)               25   9.8  
SB_19890| Best HMM Match : Drf_FH1 (HMM E-Value=2.4)                   25   9.8  
SB_57248| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   9.8  
SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   9.8  
SB_13520| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   9.8  
SB_8707| Best HMM Match : zf-AD (HMM E-Value=0.15)                     25   9.8  

>SB_41893| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 131

 Score = 37.5 bits (83), Expect = 0.002
 Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
 Frame = -3

Query: 255 FQGPQRVSGHRRKCGALRVPNHISLL*DSMELERSG--RKENSSRTSRRRLQATLGYPV- 85
           F+G +  +GH +KCGAL  P+    L  S     S   RKENSS+  R+RL+  L Y + 
Sbjct: 15  FKGRRERTGHHKKCGAL--PSIKPYLQASRFQGESSLKRKENSSQGPRQRLRVRLRYRIC 72

Query: 84  -EHSFLKTRERLLKRF 40
            E  + +    +L RF
Sbjct: 73  RERQYPRPGSGILTRF 88



 Score = 25.8 bits (54), Expect = 5.6
 Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
 Frame = -2

Query: 232 RTPPQMRCSSRS--EPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFGLPRRTLVFKDEG 59
           RT    +C +    +PYL +  F G  +L++K         +S G    PR+ L  +   
Sbjct: 21  RTGHHKKCGALPSIKPYLQASRFQGESSLKRKEN-------SSQG----PRQRLRVRLRY 69

Query: 58  TIIET--VPLPGSGIGTGFPF 2
            I      P PGSGI T FPF
Sbjct: 70  RICRERQYPRPGSGILTRFPF 90


>SB_27417| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)
          Length = 538

 Score = 31.9 bits (69), Expect = 0.085
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -3

Query: 264 SPEFQGPQRVSGHRRKCGAL 205
           SP FQG +  +GH +KCGAL
Sbjct: 128 SPNFQGRRERTGHHKKCGAL 147


>SB_12021| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 51

 Score = 31.9 bits (69), Expect = 0.085
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -3

Query: 264 SPEFQGPQRVSGHRRKCGAL 205
           SP FQG +  +GH +KCGAL
Sbjct: 22  SPNFQGRRERTGHHKKCGAL 41


>SB_57695| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 51

 Score = 30.3 bits (65), Expect = 0.26
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -3

Query: 264 SPEFQGPQRVSGHRRKCGAL 205
           SP F+G +  +GH +KCGAL
Sbjct: 22  SPNFKGRRERTGHHKKCGAL 41


>SB_57686| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 51

 Score = 29.5 bits (63), Expect = 0.45
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -3

Query: 264 SPEFQGPQRVSGHRRKCGAL 205
           SP+FQGP R     +KCGAL
Sbjct: 22  SPKFQGPSRAHRTPQKCGAL 41


>SB_4196| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 474

 Score = 28.7 bits (61), Expect = 0.79
 Identities = 15/71 (21%), Positives = 30/71 (42%)
 Frame = +3

Query: 6   GNPVPIPEPGSGTVSIIVPSSLKTSVRRGNPKWPEDAAERSGKSFLFCLSVRVPWNPIEG 185
           G P P+ +     +   +P  L+ S  RG P W +++   +         V +PW  +  
Sbjct: 169 GIPTPVDKMTQAQLRAFIPMMLRYSTGRGKPGWGKESTRPN------WWPVDLPWQNVRS 222

Query: 186 RYGSEREEHRI 218
              SE ++ ++
Sbjct: 223 DCRSEEQKAKV 233


>SB_58033| Best HMM Match : HSA (HMM E-Value=3.2)
          Length = 249

 Score = 27.5 bits (58), Expect = 1.8
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -3

Query: 111 LQATLGYPVEHSFLKTRERLLKRFRCRVP 25
           L  TLGYP  H+FL+ R R+L  +R   P
Sbjct: 41  LSGTLGYPALHTFLE-RFRVLDLYRSYSP 68


>SB_52265| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 187

 Score = 27.1 bits (57), Expect = 2.4
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = -3

Query: 147 RKENSSRTSRRRLQATLGYPV--EHSFLKTRERLLKRF 40
           RKENSS+  R+RL+  L Y +  E  + +    +L RF
Sbjct: 44  RKENSSQGPRQRLRVRLRYRICRERQYPRPGSGILTRF 81


>SB_50916| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1681

 Score = 27.1 bits (57), Expect = 2.4
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +1

Query: 25  RNPAAEPFQ*SFPRL*KRVFDGVTQSGLKTPPRGPGR 135
           R P AEP + + P+L +R+ DG  Q  ++  PRG  R
Sbjct: 200 RTPRAEPRE-ARPKLSERLDDGRDQKTMRLLPRGTPR 235


>SB_20905| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 106

 Score = 27.1 bits (57), Expect = 2.4
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = -3

Query: 147 RKENSSRTSRRRLQATLGYPV--EHSFLKTRERLLKRF 40
           RKENSS+  R+RL+  L Y +  E  + +    +L RF
Sbjct: 26  RKENSSQGPRQRLRVRLRYRICRERQYPRPGSGILTRF 63


>SB_13724| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 51

 Score = 27.1 bits (57), Expect = 2.4
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -3

Query: 255 FQGPQRVSGHRRKCGAL 205
           F+G +  +GH RKCGAL
Sbjct: 25  FKGRRERTGHHRKCGAL 41


>SB_8277| Best HMM Match : DUF827 (HMM E-Value=1.7)
          Length = 208

 Score = 27.1 bits (57), Expect = 2.4
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +1

Query: 25  RNPAAEPFQ*SFPRL*KRVFDGVTQSGLKTPPRGPGR 135
           R P AEP + + P+L +R+ DG  Q  ++  PRG  R
Sbjct: 162 RTPRAEPRE-ARPKLSERLDDGRDQKKMRLLPRGTPR 197


>SB_55215| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.0003)
          Length = 458

 Score = 27.1 bits (57), Expect = 2.4
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +1

Query: 25  RNPAAEPFQ*SFPRL*KRVFDGVTQSGLKTPPRGPGR 135
           R P AEP + + P+L +R+ DG  Q  ++  PRG  R
Sbjct: 412 RTPRAEPRE-ARPKLSERLDDGRDQKKMRLLPRGTPR 447


>SB_51968| Best HMM Match : PT (HMM E-Value=0.54)
          Length = 514

 Score = 27.1 bits (57), Expect = 2.4
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +2

Query: 38  RNRFNNRSLVFKNECSTG 91
           R+  NNRS+VF  EC TG
Sbjct: 53  RSYHNNRSVVFLGECMTG 70


>SB_105| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2982

 Score = 26.6 bits (56), Expect = 3.2
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -2

Query: 205  SRSEPYLPSIGFHGTRTLRQKRKLFPDL 122
            S   P+ P  G HG RT R +   FP L
Sbjct: 1175 SLGHPHPPLAGLHGARTSRPEDHRFPTL 1202


>SB_31780| Best HMM Match : Pkinase (HMM E-Value=0)
          Length = 964

 Score = 26.6 bits (56), Expect = 3.2
 Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = +3

Query: 9   NPVPIPEPGSGTVSIIVPSSLKTSVRRGNPKWPEDAAERSGKSFLFCLSVRVPWNP--IE 182
           NP+P+P+  SG V +    +L T V         + ++ SG       + +  W P  +E
Sbjct: 351 NPLPLPQHDSGVVQVSCGRTLMTGVTANGRMILWEGSKSSGLMSSGGKNEKTVWVPRFLE 410

Query: 183 GRYG 194
           G+ G
Sbjct: 411 GQSG 414


>SB_24257| Best HMM Match : DUF583 (HMM E-Value=0.16)
          Length = 3999

 Score = 26.6 bits (56), Expect = 3.2
 Identities = 17/57 (29%), Positives = 23/57 (40%)
 Frame = -1

Query: 176 RIPWNSNAQAEKKTLPGPLGGVFRPLWVTPSNTRF*RRGNDY*NGSAAGFRNRNRIP 6
           R PW      E  T+  P+ GV        + T F ++GND  +       NR R P
Sbjct: 112 RFPWGEGRMVETVTIIQPV-GVVEGQEFGAAGTVFVQKGNDTSHERTLSVDNRKRSP 167


>SB_37312| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 52

 Score = 26.2 bits (55), Expect = 4.2
 Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = -3

Query: 261 PEF-QGPQRVSGHRRKCGAL 205
           PEF +G +  +GH +KCGAL
Sbjct: 23  PEFSKGRRERTGHHKKCGAL 42


>SB_55223| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 101

 Score = 26.2 bits (55), Expect = 4.2
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 264 SPEFQGPQRVSGHRRKC 214
           SP FQG +  +GH +KC
Sbjct: 84  SPNFQGRRERTGHHKKC 100


>SB_51727| Best HMM Match : RasGEF_N (HMM E-Value=7.8)
          Length = 243

 Score = 26.2 bits (55), Expect = 4.2
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -3

Query: 258 EFQGPQRVSGHRRKCGALRVPNHISLL*DS-MELERSGRKENSSRTSRRRL 109
           E  GP ++ G+R K   LR   ++S+  D  M L R    E  +   R+RL
Sbjct: 83  ELDGPAKLVGYRSKAQILRQKYNLSVSRDKVMSLLRELDPEGCASRRRKRL 133


>SB_18| Best HMM Match : OAR (HMM E-Value=0.92)
          Length = 213

 Score = 26.2 bits (55), Expect = 4.2
 Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -3

Query: 144 KENSSRTSRRRLQAT-LGYPVEHSFLKT 64
           K + + +SRRR Q    GYP++ SF +T
Sbjct: 4   KASDTCSSRRRSQLVYFGYPIQRSFFET 31


>SB_18006| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 52

 Score = 25.8 bits (54), Expect = 5.6
 Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = -3

Query: 264 SPEF-QGPQRVSGHRRKCGAL 205
           SP F +G +  +GH +KCGAL
Sbjct: 22  SPNFSRGRRERTGHHKKCGAL 42


>SB_6888| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1257

 Score = 25.8 bits (54), Expect = 5.6
 Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
 Frame = -2

Query: 124 LSAASSGHF----GLPRRTLVFKDEGTIIETVPLPGSGIG 17
           ++ +S+GH      +  R  VFK++G++I+ V   GSG G
Sbjct: 766 ITISSNGHVVVTDRINSRVQVFKEDGSLIKVVGSHGSGDG 805


>SB_42222| Best HMM Match : ig (HMM E-Value=2.1e-17)
          Length = 364

 Score = 25.8 bits (54), Expect = 5.6
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 174 DSMELERSGRKENSSRTSRRRLQATLGYPVEHSFLKT 64
           DS+E+E   RK N  + +RR+ +   G PV  S L +
Sbjct: 253 DSIEIEGKERKSNVRKENRRQGKKIEGIPVITSKLSS 289


>SB_40594| Best HMM Match : Extensin_2 (HMM E-Value=0.083)
          Length = 440

 Score = 25.8 bits (54), Expect = 5.6
 Identities = 11/38 (28%), Positives = 16/38 (42%)
 Frame = -1

Query: 185 PFYRIPWNSNAQAEKKTLPGPLGGVFRPLWVTPSNTRF 72
           P +    N N      T  GP+G  F+P+ V    + F
Sbjct: 212 PLFPAAQNVNGTVASSTSSGPVGADFKPITVEAGGSTF 249


>SB_25347| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 113

 Score = 25.8 bits (54), Expect = 5.6
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -3

Query: 255 FQGPQRVSGHRRKCGAL 205
           F+G +  +GH +KCGAL
Sbjct: 87  FKGRRERTGHHKKCGAL 103


>SB_44329| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 423

 Score = 25.4 bits (53), Expect = 7.4
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3

Query: 177 IEGRYGSEREEHRICGGVRI 236
           +EGRYG   E + I GG RI
Sbjct: 30  LEGRYGKADEPYAIRGGSRI 49


>SB_21299| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2630

 Score = 25.4 bits (53), Expect = 7.4
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -1

Query: 134  LPGPLGGVFRPLWVTPSNT 78
            LP  + G+F   WV+PSNT
Sbjct: 2598 LPNKIIGLFSWCWVSPSNT 2616


>SB_17711| Best HMM Match : HECT (HMM E-Value=4.9)
          Length = 310

 Score = 25.4 bits (53), Expect = 7.4
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = +3

Query: 63  SSLKTSV---RRGNPKWPEDAAERSGKSFLFCLSVRVPWNPIE 182
           ++L+TSV   R  +P W +   + + +SFL     RV +N  E
Sbjct: 2   TTLRTSVGTQRMSSPPWSKSIVKTTPRSFLASRQQRVVYNGFE 44


>SB_7296| Best HMM Match : PHD (HMM E-Value=0.0013)
          Length = 873

 Score = 25.4 bits (53), Expect = 7.4
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -2

Query: 244 AESIRTPPQMRCSSRSEPYLP 182
           AE I TPPQM+    S P  P
Sbjct: 475 AEGINTPPQMQSMLYSPPIFP 495


>SB_51278| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 562

 Score = 25.0 bits (52), Expect = 9.8
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 267 PSPEFQGPQRVSGHRRKCGALRV 199
           PSP F  PQR + H ++ G  RV
Sbjct: 9   PSPFFVCPQRFARHTQRLGYTRV 31


>SB_49646| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 624

 Score = 25.0 bits (52), Expect = 9.8
 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
 Frame = -2

Query: 235 IRTPPQMRCSSRSEPYLPSIGF----HGTRTLRQKRKLFPDLSAASSGHFGLPRRTLVFK 68
           +RTPP+   S ++ P  PSI       G   L    K  P LS   SG   L R + V +
Sbjct: 79  VRTPPKDGSSFKTPPTSPSILITSEKGGQNALLASIKSTPTLSRRESGKGSLKRGSDVSR 138

Query: 67  DE 62
            +
Sbjct: 139 SQ 140


>SB_48437| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 4247

 Score = 25.0 bits (52), Expect = 9.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 156  VRVPWNPIEGRYGSEREEHRICGG 227
            V V WN   G+  ++R+E  I GG
Sbjct: 2679 VEVQWNDGSGQKSTDRQEKPIAGG 2702


>SB_37245| Best HMM Match : Disintegrin (HMM E-Value=7.9)
          Length = 227

 Score = 25.0 bits (52), Expect = 9.8
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -3

Query: 147 RKENSSRTSRRRLQATLGYPV 85
           RKENSS+  R+RL+  L Y +
Sbjct: 106 RKENSSQGPRQRLRVRLRYRI 126


>SB_19890| Best HMM Match : Drf_FH1 (HMM E-Value=2.4)
          Length = 169

 Score = 25.0 bits (52), Expect = 9.8
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +3

Query: 18  PIPEPGSGTVSIIVPSSLKTSVRRGNPKWPEDAAE 122
           P+  P S T+S   P   K +VRR  P  P+ A E
Sbjct: 33  PLILPKSSTISTKPPIKPKPAVRRVPPPAPKKAPE 67


>SB_57248| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 281

 Score = 25.0 bits (52), Expect = 9.8
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -1

Query: 179 YRIPWNSNAQAEKKTLPGPLGGV 111
           ++IP N   +A+K T+P P  G+
Sbjct: 152 HKIPKNKKTKAKKTTIPVPCRGI 174


>SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1516

 Score = 25.0 bits (52), Expect = 9.8
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 138 NSSRTSRRRLQATLGYPVEHSFL 70
           +S  +SRRR+    G P+E  FL
Sbjct: 824 SSCTSSRRRINTCTGLPIERCFL 846


>SB_13520| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 155

 Score = 25.0 bits (52), Expect = 9.8
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -3

Query: 147 RKENSSRTSRRRLQATLGYPV 85
           RKENSS+  R+RL+  L Y +
Sbjct: 7   RKENSSQGPRQRLRVRLRYRI 27


>SB_8707| Best HMM Match : zf-AD (HMM E-Value=0.15)
          Length = 605

 Score = 25.0 bits (52), Expect = 9.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 162 VPWNPIEGRYGSEREEHRI 218
           +PW P+   Y   REE+R+
Sbjct: 568 MPWQPLRPLYSEMREENRL 586


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,672,425
Number of Sequences: 59808
Number of extensions: 191332
Number of successful extensions: 619
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 618
length of database: 16,821,457
effective HSP length: 70
effective length of database: 12,634,897
effective search space used: 303237528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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