Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20091
(714 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49777| Best HMM Match : Peptidase_C1 (HMM E-Value=0) 123 1e-28
SB_29711| Best HMM Match : Peptidase_C1 (HMM E-Value=6.9e-06) 38 0.006
SB_56676| Best HMM Match : Peptidase_C1 (HMM E-Value=0.0027) 36 0.033
SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.033
SB_4471| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0) 33 0.23
SB_56915| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.53
SB_11428| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.70
SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.70
SB_25162| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_11608| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_41087| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_4210| Best HMM Match : JTB (HMM E-Value=5.8) 29 3.7
SB_48964| Best HMM Match : TRAP_240kDa (HMM E-Value=0) 28 6.5
SB_58003| Best HMM Match : Peptidase_C1 (HMM E-Value=7.6e-05) 28 6.5
SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_9149| Best HMM Match : Lipase_GDSL (HMM E-Value=0.51) 28 8.6
>SB_49777| Best HMM Match : Peptidase_C1 (HMM E-Value=0)
Length = 298
Score = 123 bits (297), Expect = 1e-28
Identities = 48/85 (56%), Positives = 61/85 (71%)
Frame = +3
Query: 255 YSNGTKHFHFSAEDLLSCCPICGLGCSGGMPRLAWEYWKHFGLVSGGSYNSSQGCRPYEI 434
+S G H SAEDLLSCC CG+GC+GG P AW++WK GLV+GG Y+S +GC+PY+I
Sbjct: 129 HSEGKVMPHISAEDLLSCCETCGMGCNGGYPESAWDHWKSKGLVTGGQYDSHKGCQPYKI 188
Query: 435 PPCEHHVPGNRMPCSGDTKTPKCTK 509
C+HHV G PC GD+ TPKC +
Sbjct: 189 AACDHHVVGKLKPCKGDSPTPKCER 213
Score = 93.5 bits (222), Expect = 2e-19
Identities = 40/84 (47%), Positives = 57/84 (67%)
Frame = +1
Query: 1 AGRNFPRDTSFAHLKKIMGVIKDEHFATLPIKTHKIDLIASLPENFDPRDKWPDCPTLNE 180
AG+NF + +K++ G K LP++ + + +P++FD R++WP CPT+ E
Sbjct: 47 AGKNFAEVYTIEDVKRLCGAKKGP---PLPLRKKLLISMDDVPDHFDSREQWPHCPTIKE 103
Query: 181 VRDQGSCGSCWAFGAVEAMTDRVC 252
VRDQG+CGSCWAFGAVEAM+DR C
Sbjct: 104 VRDQGACGSCWAFGAVEAMSDRYC 127
Score = 83.4 bits (197), Expect = 2e-16
Identities = 35/72 (48%), Positives = 49/72 (68%)
Frame = +2
Query: 497 KMHKKCESGYDVNYKQDKQYGKHVYTVSGDEDHIRAELFKNGPVEGAFTVYSDLLSYKSG 676
K +KCE+GY+V+Y DK +G+ Y+V D I+ E+ NGPVEGAFTVY+D +YKSG
Sbjct: 210 KCERKCEAGYNVSYSDDKHFGQSAYSVRSDPAEIQKEIMTNGPVEGAFTVYADFPTYKSG 269
Query: 677 VYKHTQGDVSAG 712
+K +G+ G
Sbjct: 270 FFKIKRGNDECG 281
>SB_29711| Best HMM Match : Peptidase_C1 (HMM E-Value=6.9e-06)
Length = 385
Score = 38.3 bits (85), Expect = 0.006
Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = +1
Query: 10 NFPRDTSFAHLKKIMGVIKDEHFATLPIKTHKIDLIASLPENFDPRDKWPDCPTLNEVRD 189
+FP D + K G + DE + ID + D D+ P +N +
Sbjct: 91 HFP-DLTDDEFKSYKGALDDESKDVMNDHDDVIDDDVNDETQEDEEDE-PSDGAVNPAKG 148
Query: 190 QGSCGSCWAF---GAVEA 234
QG+CGSCWAF GAVEA
Sbjct: 149 QGTCGSCWAFATAGAVEA 166
>SB_56676| Best HMM Match : Peptidase_C1 (HMM E-Value=0.0027)
Length = 295
Score = 35.9 bits (79), Expect = 0.033
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +1
Query: 94 KTHKIDLIASLPENFDPRDKWPD--CPTLNEVRDQGSCGSCWAFGAVEAMTDRV 249
+ H+ +A LP +FD RD T CGSCWA G AM DR+
Sbjct: 41 RPHEYLNMAKLPTSFDWRDVNGTNYASTTRNQHIPQYCGSCWAHGTTSAMADRI 94
>SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1512
Score = 35.9 bits (79), Expect = 0.033
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +1
Query: 10 NFPRDTSFAHLKKIMGVIKDEH--FATLPIKTHKIDLIASLPENFDPRDKWPDCPTLNEV 183
N D + A + ++ G++ +E P D LP + D W +N V
Sbjct: 459 NHMADMTDAEVNRMKGLLHEEPPLIGDSPFSIPDKDRGVPLPPHVD----WRKAGAVNSV 514
Query: 184 RDQGSCGSCWAFGAVEAM 237
+ QG CGSC+AF A+
Sbjct: 515 KSQGICGSCYAFAVAGAL 532
>SB_4471| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 331
Score = 33.5 bits (73), Expect = 0.17
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 154 WPDCPTLNEVRDQGSCGSCWAFGAVEAM 237
W + V++QG CGSCWAF A+
Sbjct: 121 WRSKGYVTPVKNQGQCGSCWAFSTTGAL 148
>SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0)
Length = 1220
Score = 33.1 bits (72), Expect = 0.23
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +1
Query: 154 WPDCPTLNEVRDQGSCGSCWAF---GAVEAMTDRVCTILTELN 273
W + V++QG CGSCWAF G+VE R L L+
Sbjct: 49 WSQKGYVTGVKNQGQCGSCWAFSTTGSVEGQHFRKTGSLVSLS 91
>SB_56915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 720
Score = 31.9 bits (69), Expect = 0.53
Identities = 26/121 (21%), Positives = 49/121 (40%), Gaps = 6/121 (4%)
Frame = -1
Query: 696 PCVCLYTPLLYDSKSEYTVKAPSTGPFLNNSARMWS-SSPDTVYTCFPYCLSCL*LTSYP 520
P C L+ S + + A + + ++R++S S + + CF C+ L + Y
Sbjct: 155 PWSCASAGLIAKSDAFRLIGALTGSNVPHRNSRLFSVDSLEVYHECFGGCVGTLEIELYT 214
Query: 519 DSHFLCILESSCHRYRASCCRVRDVHTEGSRKVC-----NLDWNCNYLLILDRSASNIPK 355
D + C+ S C + V HT G C + +W +L D+ ++ +
Sbjct: 215 DPYAECVTCSQCDGVFSPRTFVTHHHTSGEVHTCHWGFDSANWKLYLMLCNDQPTLHVQR 274
Query: 354 L 352
L
Sbjct: 275 L 275
>SB_11428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 521
Score = 31.5 bits (68), Expect = 0.70
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 181 VRDQGSCGSCWAFGAVEAM 237
V++QG CGSCWAF ++
Sbjct: 348 VKNQGQCGSCWAFSTTGSL 366
>SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 31.5 bits (68), Expect = 0.70
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 154 WPDCPTLNEVRDQGSCGSCWAFG 222
W + V+DQ CGSCW+FG
Sbjct: 646 WVIRGAVTPVKDQAVCGSCWSFG 668
>SB_25162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -3
Query: 631 FDRTILEQFGADV--VFVSGHSIYMFSVLFVLFVINVVSRFAFFVHFG 494
FDR +L F D+ V ++ + SVL +L + ++ RF + FG
Sbjct: 197 FDRILLSAFEFDIYAVIKGSSALRILSVLCILSGLRIIERFVYHERFG 244
>SB_11608| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 854
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/83 (26%), Positives = 31/83 (37%)
Frame = +3
Query: 252 YYSNGTKHFHFSAEDLLSCCPICGLGCSGGMPRLAWEYWKHFGLVSGGSYNSSQGCRPYE 431
Y NG H + L C G+GCS EY + +GG+ N C+
Sbjct: 266 YCDNGVCKGH--PYNCLPCETQDGIGCSLKPKYCVIEYNGNRTCFAGGTLNPGNPCQQCN 323
Query: 432 IPPCEHHVPGNRMPCSGDTKTPK 500
H N +PC+ + T K
Sbjct: 324 SNDKFHWTNNNHLPCNDNNSTTK 346
>SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2437
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +2
Query: 551 QYGKHVYTVSGDEDHIRAELFKNGPVEGAFTVYSDLLSYKSGVYKHT 691
+YG H Y V D+ A+L G TVY KS ++KH+
Sbjct: 521 EYGLHFYRVQSDKKAQDADLLFLGICVRGVTVYESRGHIKSPIHKHS 567
>SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 172 LNEVRDQGSCGSCWAFGAVEAM 237
++ VR QG CGSC+A AV A+
Sbjct: 324 VSPVRGQGICGSCYALAAVGAV 345
>SB_41087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 491
Score = 29.5 bits (63), Expect = 2.8
Identities = 28/113 (24%), Positives = 44/113 (38%)
Frame = +3
Query: 366 WKHFGLVSGGSYNSSQGCRPYEIPPCEHHVPGNRMPCSGDTKTPKCTKNANLDTTLITNK 545
W F L SQG P I C +PG++ T T K + + L+T
Sbjct: 222 WGRFFLPRREGPRPSQGHNPAGILRCPTAIPGHKRTI---TITGKFEEKNAVMIILLTCY 278
Query: 546 TNNTENMYILCPETKTTSAPNCSRMVRSKVLSQYIQICCRTRVVYTNTHKGTS 704
++ T +L T+T +R S + + ++IC R R + TS
Sbjct: 279 SSQTREKTML---TETIKVNRTTRTTTSIISKKRLKICVRCRFQEPTQQRDTS 328
>SB_4210| Best HMM Match : JTB (HMM E-Value=5.8)
Length = 427
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +3
Query: 492 TPKCTKNANLDTTLITNK-TNNTENMYILCPETKTTSAPNCSRMVRSKVLSQYIQICCRT 668
TP ++ + + + NK T N N+ ++ P+ +TT A N + V +K + + RT
Sbjct: 53 TPFYIRDMFVKCSDVHNKNTKNAANLNLVLPKARTTLAKNSFKFVAAKRIQRTHGRTQRT 112
Query: 669 RVVYTNTHKGTSRR 710
R T T SR+
Sbjct: 113 RQNTTTTWPQGSRQ 126
>SB_48964| Best HMM Match : TRAP_240kDa (HMM E-Value=0)
Length = 1227
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/78 (25%), Positives = 36/78 (46%)
Frame = +3
Query: 378 GLVSGGSYNSSQGCRPYEIPPCEHHVPGNRMPCSGDTKTPKCTKNANLDTTLITNKTNNT 557
GL + GS+++ R P +H P +G+T T K + T +T ++
Sbjct: 518 GLATAGSHDAGNKGREVGAPYRVNHKP----IYTGETLTSKLYSCPYILDTSLTGIESSE 573
Query: 558 ENMYILCPETKTTSAPNC 611
+++ + P T+TTS C
Sbjct: 574 DSLDSMLPSTRTTSVLYC 591
>SB_58003| Best HMM Match : Peptidase_C1 (HMM E-Value=7.6e-05)
Length = 110
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +2
Query: 575 VSGDEDHIRAELFKNGPVEGAFTVYSDLLSYKSGVY 682
VSG D + AE+F GP+ S L Y GVY
Sbjct: 3 VSG-RDRMMAEIFARGPIACGIEATSRLEQYTGGVY 37
>SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 286
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = +3
Query: 486 TKTPKCTKNANLDTTLITNKTNNTENMYILCPETKTTSAPNCS 614
T TP T N TT T T N P T TT+ PN +
Sbjct: 185 TTTPNTTTNTPNATTTTPTATTTTPNATTTTPNT-TTTTPNAT 226
>SB_9149| Best HMM Match : Lipase_GDSL (HMM E-Value=0.51)
Length = 604
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 543 KTNNTENMYILCPETKTTSAPNCSRMVRSK 632
KT N N ++ P+T+TT A N + V +K
Sbjct: 546 KTKNAANHNLVLPKTRTTLAKNSFKFVAAK 575
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,417,169
Number of Sequences: 59808
Number of extensions: 552619
Number of successful extensions: 1512
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1512
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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