Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30071
(685 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 287 8e-78
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 287 8e-78
SB_56| Best HMM Match : Actin (HMM E-Value=0) 287 8e-78
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 286 1e-77
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 285 2e-77
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 285 3e-77
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 253 9e-68
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 3e-21
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 85 4e-17
SB_54| Best HMM Match : Actin (HMM E-Value=0) 85 7e-17
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 69 4e-12
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 38 0.006
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 34 0.093
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.50
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 30 2.0
SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0) 29 2.7
SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19) 29 4.6
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_8479| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 287 bits (703), Expect = 8e-78
Identities = 132/138 (95%), Positives = 136/138 (98%)
Frame = -1
Query: 685 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 506
KSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANT
Sbjct: 201 KSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANT 260
Query: 505 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 326
VLSGGTTMYPGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 261 VLSGGTTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 320
Query: 325 SKQEYDESGPSIVHRKCF 272
SKQEYDESGP+IVHRKCF
Sbjct: 321 SKQEYDESGPAIVHRKCF 338
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 287 bits (703), Expect = 8e-78
Identities = 132/138 (95%), Positives = 136/138 (98%)
Frame = -1
Query: 685 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 506
KSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANT
Sbjct: 239 KSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANT 298
Query: 505 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 326
VLSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 299 VLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 358
Query: 325 SKQEYDESGPSIVHRKCF 272
SKQEYDESGPSIVHRKCF
Sbjct: 359 SKQEYDESGPSIVHRKCF 376
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 287 bits (703), Expect = 8e-78
Identities = 132/138 (95%), Positives = 136/138 (98%)
Frame = -1
Query: 685 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 506
KSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANT
Sbjct: 238 KSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANT 297
Query: 505 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 326
VLSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 298 VLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 357
Query: 325 SKQEYDESGPSIVHRKCF 272
SKQEYDESGPSIVHRKCF
Sbjct: 358 SKQEYDESGPSIVHRKCF 375
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 286 bits (702), Expect = 1e-77
Identities = 132/138 (95%), Positives = 136/138 (98%)
Frame = -1
Query: 685 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 506
KSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANT
Sbjct: 239 KSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANT 298
Query: 505 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 326
VLSGG+TMYPGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 299 VLSGGSTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 358
Query: 325 SKQEYDESGPSIVHRKCF 272
SKQEYDESGPSIVHRKCF
Sbjct: 359 SKQEYDESGPSIVHRKCF 376
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 285 bits (699), Expect = 2e-77
Identities = 131/138 (94%), Positives = 136/138 (98%)
Frame = -1
Query: 685 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 506
KSYELPDGQVITIGNERFRCPEAL QPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANT
Sbjct: 212 KSYELPDGQVITIGNERFRCPEALLQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANT 271
Query: 505 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 326
V+SGGTTMYPG+ADRMQKEI+ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 272 VMSGGTTMYPGLADRMQKEISALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 331
Query: 325 SKQEYDESGPSIVHRKCF 272
SKQEYDESGP+IVHRKCF
Sbjct: 332 SKQEYDESGPAIVHRKCF 349
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 285 bits (698), Expect = 3e-77
Identities = 131/138 (94%), Positives = 136/138 (98%)
Frame = -1
Query: 685 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 506
KSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANT
Sbjct: 238 KSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANT 297
Query: 505 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 326
VLSGG+TM+PGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 298 VLSGGSTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 357
Query: 325 SKQEYDESGPSIVHRKCF 272
SKQEYDESGPSIVHRKCF
Sbjct: 358 SKQEYDESGPSIVHRKCF 375
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 253 bits (620), Expect = 9e-68
Identities = 114/138 (82%), Positives = 127/138 (92%)
Frame = -1
Query: 685 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 506
K+YELPDGQVI+IGNERFRCPEA+FQP+FLGMEA GIHE YN IMKCDVDIRKDLY+N
Sbjct: 12 KTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIRKDLYSNC 71
Query: 505 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 326
VLSGG+TM+PGIADRMQKEI LA ++MK+K+IAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 72 VLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSILASLSTFQQMWI 131
Query: 325 SKQEYDESGPSIVHRKCF 272
+K+EY E GP IVHRKCF
Sbjct: 132 AKEEYHEYGPPIVHRKCF 149
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 99.1 bits (236), Expect = 3e-21
Identities = 58/158 (36%), Positives = 86/158 (54%), Gaps = 29/158 (18%)
Frame = -1
Query: 685 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 506
+ Y LPDG+V+ + ERF PEALFQP + +E G+ E +N+I D+D R + Y +
Sbjct: 242 EQYTLPDGRVVKLSGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHI 301
Query: 505 VLSGGTTMYPGIADRMQKEITAL---------------------APST-----MKIKI-I 407
VLSGG+TMYPG+ R+++EI L P T K KI I
Sbjct: 302 VLSGGSTMYPGLPSRLEREIKQLYLERVLKGDTSKLSSGMGMEQIPLTADYLLQKFKIRI 361
Query: 406 APP-ERKYSVWIGGSILAS-LSTFQQMWISKQEYDESG 299
P RK+ V++GG++LA + W++++EY+E G
Sbjct: 362 EDPPRRKHMVFMGGAVLADIMKDKDSFWMTRKEYEEKG 399
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 85.4 bits (202), Expect = 4e-17
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 17/149 (11%)
Frame = -1
Query: 655 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 479
+ + ERF PE F P F + + E N I C +D+R+ LY N VLSGG+TM+
Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLYKNIVLSGGSTMF 255
Query: 478 PGIADRMQKEIT----------------ALAPSTMKIKIIAPPERKYSVWIGGSILASLS 347
R+Q++I + P ++ ++I+ ++Y+VW GGS+LAS
Sbjct: 256 RDFGRRLQRDIKRTVDARLKMSETLSGGRIKPKPIETQVISHHMQRYAVWFGGSMLASTP 315
Query: 346 TFQQMWISKQEYDESGPSIVHRKCF*THR 260
F + +K +YDE GPSI F HR
Sbjct: 316 EFYSVCHTKADYDEHGPSICRHNPF-LHR 343
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 84.6 bits (200), Expect = 7e-17
Identities = 38/62 (61%), Positives = 46/62 (74%)
Frame = -1
Query: 679 YELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 500
Y LPDGQ I IG+ERFR E LFQPS LG + GIHE+ + SI KCD+D+R +L+ N VL
Sbjct: 2285 YMLPDGQSIRIGSERFRAAEPLFQPSLLGRDIDGIHESIFKSIKKCDIDLRAELFHNIVL 2344
Query: 499 SG 494
SG
Sbjct: 2345 SG 2346
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 68.9 bits (161), Expect = 4e-12
Identities = 30/85 (35%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Frame = -1
Query: 595 GMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 416
G A G+ + S+ D+DIR L+ + +++GG T+ G +R+ +E+ + P +M++
Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRL 205
Query: 415 KII---APPERKYSVWIGGSILASL 350
K+I + E++++ WIGGSILASL
Sbjct: 206 KLISNNSSVEKRFNPWIGGSILASL 230
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 52.4 bits (120), Expect = 3e-07
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Frame = -1
Query: 559 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS--------TMKIKIIA 404
+S++ C +D RK L N VL GGT M PG R+ +EI L S +K+
Sbjct: 64 DSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQ 123
Query: 403 PP-ERKYSVWIGGSILASLSTFQQMWISKQEYDE 305
PP + W+GG+I SL +++ Y +
Sbjct: 124 PPVNANITAWLGGAIFGSLEVLADRSTTRERYQQ 157
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = -1
Query: 556 SIMKCDVDIRKDLYANTVLSGGTTMYPG 473
+I K D+D+R+ LY+N VLSGG+T++ G
Sbjct: 264 AIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 34.3 bits (75), Expect = 0.093
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = -1
Query: 685 KSYELPDGQVITIGNERFRCPEALFQPSFL 596
K Y LPDGQ+I+IG E E LF+P L
Sbjct: 869 KFYTLPDGQMISIGYECISSMEPLFRPDLL 898
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 31.9 bits (69), Expect = 0.50
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 625 PEALFQPSFLGMEACGIHET 566
PE +FQPS LG+E GI ET
Sbjct: 3 PEIIFQPSMLGLEQAGITET 22
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +3
Query: 363 IDPPIHTEYFLSGGAMILIFIVDGARAVISFCIRSAIPGYMV-VPPD-NTVLAYKSLRMS 536
+DPP+ +Y L+GG ++ + FCI G++V PP+ N+ + R++
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCI---FQGFVVPTPPECNSAIVLPDARIT 814
Query: 537 TS 542
S
Sbjct: 815 AS 816
>SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0)
Length = 1066
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 345 PSNRCGSRNRSTTSLAPPLYTGSASK--RTARRCLQQPAAGC 226
P N+ G++ R +L P++TGS + RT + P+A C
Sbjct: 879 PGNQAGNKTRPLRALRSPIHTGSTLEVDRTRQGTRPDPSARC 920
>SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19)
Length = 158
Score = 28.7 bits (61), Expect = 4.6
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2
Query: 657 SSLSETKDSVAQRLSSNPRSWVWK 586
S+ SETK SV +R + + W+W+
Sbjct: 96 STKSETKASVVERFNRTSKEWMWR 119
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 511 NTVLSGGTTMYPGIADRMQKEITALAP 431
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_8479| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = -2
Query: 378 GSVDRSSPPSLPSNRCGSRNRS----TTSLAPPLYTGSASKRTARRC 250
GS+ SP S P +R GSR R+ T+S A + +T ++C
Sbjct: 338 GSIAPPSPTSTPRSRTGSRTRTPPTPTSSRASSRGSARGGAKTTKKC 384
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,566,667
Number of Sequences: 59808
Number of extensions: 485581
Number of successful extensions: 1359
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1355
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1769412099
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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