Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30061
(739 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24471| Best HMM Match : Lectin_C (HMM E-Value=2.7e-12) 37 0.020
SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098) 34 0.14
SB_42042| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_17008| Best HMM Match : Galactosyl_T (HMM E-Value=3.6e-30) 33 0.32
SB_16888| Best HMM Match : ResIII (HMM E-Value=2.6) 31 0.74
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_10933| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_1473| Best HMM Match : DUF551 (HMM E-Value=1.6) 30 1.7
SB_3322| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_7400| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_39895| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_24760| Best HMM Match : PT (HMM E-Value=0.17) 29 3.0
SB_7281| Best HMM Match : TSP_1 (HMM E-Value=0.027) 29 3.0
SB_42721| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_56937| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_50551| Best HMM Match : Extensin_2 (HMM E-Value=0.41) 29 3.9
SB_31160| Best HMM Match : FeThRed_B (HMM E-Value=4.1) 29 3.9
SB_58622| Best HMM Match : GCV_T (HMM E-Value=6e-17) 28 6.9
SB_3546| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-29) 28 6.9
SB_11112| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
>SB_24471| Best HMM Match : Lectin_C (HMM E-Value=2.7e-12)
Length = 695
Score = 36.7 bits (81), Expect = 0.020
Identities = 22/58 (37%), Positives = 24/58 (41%)
Frame = +3
Query: 462 SELAYLTPWTAPTPYPSPDLTQ*PLRSTSPYQSTGPYRYPYLMQYPYPWSNKLEYQSP 635
SE P A P+P T S PYQS PY YPY YP P+ Y P
Sbjct: 492 SEKTVEKPGKAQPSLPNPQSTI----SYQPYQSQYPYPYPYPYPYPSPYPYPAHYYPP 545
>SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098)
Length = 620
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +3
Query: 399 TSEYPFQLRTLLPSTDLCHTQSELAYLTPWTAPTPYPS--PDLTQ*PLRSTSPYQSTGPY 572
TS P + L S+ + S L +P T+P+P S P + PL S+SP S+ P
Sbjct: 198 TSSSPLTSSSPLTSSSPLTSSSPLTSSSPLTSPSPLTSSSPLTSSSPLTSSSPLTSSSPL 257
Query: 573 RYPYLMQYPYP 605
P + P P
Sbjct: 258 TSPSPLTSPSP 268
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +3
Query: 399 TSEYPFQLRTLLPSTDLCHTQSELAYLTPWTAPTPY--PSPDLTQ*PLRSTSPYQSTGPY 572
TS P + L S+ + S L +P T+ +P PSP + PL S+SP S+ P
Sbjct: 192 TSPSPLTSSSPLTSSSPLTSSSPLTSSSPLTSSSPLTSPSPLTSSSPLTSSSPLTSSSPL 251
Query: 573 RYPYLMQYPYP 605
+ P P
Sbjct: 252 TSSSPLTSPSP 262
>SB_42042| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 863
Score = 33.1 bits (72), Expect = 0.24
Identities = 21/70 (30%), Positives = 30/70 (42%)
Frame = +3
Query: 444 DLCHTQSELAYLTPWTAPTPYPSPDLTQ*PLRSTSPYQSTGPYRYPYLMQYPYPWSNKLE 623
D C +++ TP TP P+P P + S Y + P+ P +Y PWS
Sbjct: 494 DACVPNTKVTESTPSRYNTPLPTPSRYNTPWSTPSRYNT--PWSTP--SRYNTPWSTPSR 549
Query: 624 YQSPLRTQWR 653
Y +P T R
Sbjct: 550 YNTPWSTPSR 559
>SB_17008| Best HMM Match : Galactosyl_T (HMM E-Value=3.6e-30)
Length = 508
Score = 32.7 bits (71), Expect = 0.32
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +3
Query: 507 PSPDLTQ*PLRSTSPYQSTGPYR--YPYLMQYPYPWSNKLEYQSPLRTQWR 653
P D T P+ +T+ Y+ PYR YPY YPY + Y P+ T R
Sbjct: 433 PPIDTTT-PIDTTTRYRYYYPYRYYYPYRYYYPYRYYYPYRYYPPIDTTTR 482
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +3
Query: 504 YPSPDLTQ*PLRSTSPYQSTGPYRYPYLMQYPYPW 608
YP D T R PY+ PYRY Y +Y YP+
Sbjct: 474 YPPIDTTT-RYRYYYPYRYYPPYRYYYPYRYYYPY 507
>SB_16888| Best HMM Match : ResIII (HMM E-Value=2.6)
Length = 811
Score = 31.5 bits (68), Expect = 0.74
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 649 GGTQACCRTSTRSSGCTLCEIRHRRPRTLG 738
GG + C ++ RS G LCE RPR +G
Sbjct: 438 GGAKHCAESAVRSGGRNLCEDVSSRPRRIG 467
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 31.1 bits (67), Expect = 0.97
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = +3
Query: 483 PWTAPTPYPSPDLTQ*PLRSTSPYQSTGPYRYPYLMQYPYPWSNKLEYQSP 635
P+ P PYP P P +PY YP PYP S Y P
Sbjct: 101 PYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPP 151
>SB_10933| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 472
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +3
Query: 480 TPWTAPTPY--PSPDLTQ*PLRSTSPYQSTGPYRYPYLMQYPYPWSNKLEYQ 629
TP+ TPY +P P R ++PY+ + PYR + P P+ Y+
Sbjct: 387 TPYHGSTPYRGSTPYRGSIPYRGSTPYRGSTPYRGSTPYRGPTPYHGATPYR 438
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 4/58 (6%)
Frame = +3
Query: 480 TPWTAPTPY--PSPDLTQ*PLRSTSPYQSTGPYR--YPYLMQYPYPWSNKLEYQSPLR 641
TP+ TPY +P P R SP+ PYR PY PY S P R
Sbjct: 351 TPYRGATPYRGATPYRGATPYRGASPHHGATPYRRSTPYHGSTPYRGSTPYRGSIPYR 408
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +3
Query: 480 TPWTAPTPYPSPDLTQ*PLRSTSPYQSTGPYR--YPYLMQYPYPWSNKLEYQSP 635
TP+ TPY P R ++PY+ + PYR PY PY S +P
Sbjct: 381 TPYRRSTPYHGST----PYRGSTPYRGSIPYRGSTPYRGSTPYRGSTPYRGPTP 430
>SB_1473| Best HMM Match : DUF551 (HMM E-Value=1.6)
Length = 917
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 652 GTQACCRTSTRSSGCTLCEIRHRRPRTLG 738
G + C ++ RSSG +LC+ RPR++G
Sbjct: 536 GAKHCAESAVRSSGRSLCKDVSSRPRSIG 564
>SB_3322| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 777
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 435 PSTDLCHTQSELAYLTPWTAPTPYPSP 515
P + L S+L YL+P P PYPSP
Sbjct: 49 PESYLFGENSDLNYLSPKPVPFPYPSP 75
>SB_7400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1499
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 483 PWTAPTPYPSPDLTQ*PLRSTSPYQSTGPYRYPYLMQYPYP 605
P +P YP P + P + P +S Y YP++ YP P
Sbjct: 1066 PLKSPNHYPYPRVKYYP-NPSRPLKSPNHYPYPWVKYYPNP 1105
>SB_39895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 327
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 652 GTQACCRTSTRSSGCTLCEIRHRRPRTLG 738
G + C ++ RSSG +LC+ RPR +G
Sbjct: 222 GAKHCAESAVRSSGRSLCKDVSSRPRRIG 250
>SB_24760| Best HMM Match : PT (HMM E-Value=0.17)
Length = 422
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +3
Query: 483 PWT-APTPYPSPDLTQ*PLRSTSPYQSTGPYRYPYLMQYPYPWS 611
PWT P PYP+ P P+ S GP +P P+P S
Sbjct: 63 PWTDGPGPYPTDGPGPHPSHGPGPHPSHGPGPHPSHGPGPHPSS 106
>SB_7281| Best HMM Match : TSP_1 (HMM E-Value=0.027)
Length = 406
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 3/82 (3%)
Frame = +3
Query: 399 TSEYPFQLRTLLPSTDLCHTQSELAYLTPWTAPTPYP-SPDLTQ*PLRSTSPYQSTGPYR 575
T+ P+ LP TQ+ Y + + AP PY S L P + Y ++ P
Sbjct: 25 TAAKPYNYHIPLPPVTK-QTQARSMY-SSYAAPPPYQYSAYLASYPSSYPASYPASYPAS 82
Query: 576 YP--YLMQYPYPWSNKLEYQSP 635
YP Y YP + Y SP
Sbjct: 83 YPASYPASYPASYPTSYPYPSP 104
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +3
Query: 471 AYLT--PWTAPTPYPSPDLTQ*PLRSTSPYQSTGPYRYPYLMQYPYPW 608
AYL P + P YP+ P + Y ++ P YPY YP P+
Sbjct: 62 AYLASYPSSYPASYPASYPASYPASYPASYPASYPTSYPYPSPYPAPY 109
>SB_42721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 652 GTQACCRTSTRSSGCTLCEIRHRRPRTLG 738
G + C ++ RSSG LC+ RPR +G
Sbjct: 515 GAKHCAESAVRSSGRNLCKDVSSRPRRIG 543
>SB_56937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 761
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +3
Query: 483 PWTAPTPYPSPDLTQ*PLRSTSPYQSTGPY--RYPYLMQYPY 602
P+ PY D+T P T PY T PY YPY + YPY
Sbjct: 514 PYYITCPY---DITY-PYDITCPYDITCPYDITYPYDITYPY 551
>SB_50551| Best HMM Match : Extensin_2 (HMM E-Value=0.41)
Length = 376
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/21 (61%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = +3
Query: 459 QSE-LAYLTPWTAPTPYPSPD 518
QSE L + PWTAP PYP D
Sbjct: 141 QSENLRTIPPWTAPEPYPPVD 161
>SB_31160| Best HMM Match : FeThRed_B (HMM E-Value=4.1)
Length = 828
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 652 GTQACCRTSTRSSGCTLCEIRHRRPRTLG 738
G + C ++ RSSG LC+ RPR +G
Sbjct: 393 GAKHCAESAVRSSGRNLCKDVSSRPRRIG 421
>SB_58622| Best HMM Match : GCV_T (HMM E-Value=6e-17)
Length = 515
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 547 DVLLNGYWVRSGDGYGVGAVHGVRYANSDWV 455
D+ L WV G GYG+ G+ SDW+
Sbjct: 136 DIELPNMWVAIGTGYGIIHSGGIGKYLSDWI 166
>SB_3546| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-29)
Length = 447
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Frame = +3
Query: 468 LAYLTPWTAPTPYPSPDLTQ*PLRSTSPYQSTGPYRYPYLMQYPY----PWSNKLEYQSP 635
L + P+ PY +P PL T P+ PY P P P++ + Y +P
Sbjct: 340 LYHTPPFNGQPPYNTPPFNGQPLYHTPPFNGQPPYNTPPFNGQPSYNTPPFNGQPPYNTP 399
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/54 (27%), Positives = 19/54 (35%)
Frame = +3
Query: 483 PWTAPTPYPSPDLTQ*PLRSTSPYQSTGPYRYPYLMQYPYPWSNKLEYQSPLRT 644
P+ PY +P PL T P+ PY P P + Q P T
Sbjct: 323 PFNGQPPYYTPPFNGQPLYHTPPFNGQPPYNTPPFNGQPLYHTPPFNGQPPYNT 376
>SB_11112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 464
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Frame = +3
Query: 456 TQSELA-YLTPWTAPTPYPSPDLTQ*PLRST----SPYQSTGPYRYPY 584
T S++A Y + + PY S Q P +ST +PYQST R PY
Sbjct: 269 TPSQIAPYQSTPSQQAPYQSTPSQQAPYQSTPSQQAPYQSTPSQRAPY 316
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,218,670
Number of Sequences: 59808
Number of extensions: 299236
Number of successful extensions: 1213
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1162
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1986074805
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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