Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30045
(660 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 239 1e-63
SB_29364| Best HMM Match : No HMM Matches (HMM E-Value=.) 131 4e-31
SB_30334| Best HMM Match : Myosin_head (HMM E-Value=8.8e-12) 125 3e-29
SB_45041| Best HMM Match : No HMM Matches (HMM E-Value=.) 119 2e-27
SB_25986| Best HMM Match : Myosin_head (HMM E-Value=1.4e-17) 117 7e-27
SB_50655| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 4e-22
SB_34413| Best HMM Match : Myosin_head (HMM E-Value=0) 87 9e-18
SB_41091| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 2e-15
SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 6e-15
SB_32548| Best HMM Match : Myosin_head (HMM E-Value=2.9e-17) 75 7e-14
SB_5693| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 3e-12
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 7e-10
SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 8e-09
SB_43126| Best HMM Match : Myosin_head (HMM E-Value=4.1e-32) 57 1e-08
SB_25537| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_53826| Best HMM Match : HipA_C (HMM E-Value=2.7) 43 3e-04
SB_42005| Best HMM Match : Myosin_head (HMM E-Value=0) 39 0.003
SB_40059| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.022
SB_32012| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.039
SB_4921| Best HMM Match : Myosin_head (HMM E-Value=7.39998e-41) 34 0.12
SB_11541| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_54716| Best HMM Match : S-antigen (HMM E-Value=1.8) 29 3.4
SB_31410| Best HMM Match : PDZ (HMM E-Value=1.1e-15) 29 4.4
SB_34998| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_11425| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_31944| Best HMM Match : ET (HMM E-Value=0.86) 28 7.7
>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 1997
Score = 239 bits (586), Expect = 1e-63
Identities = 122/220 (55%), Positives = 153/220 (69%), Gaps = 1/220 (0%)
Frame = +2
Query: 2 DNSPRFGKFIRIHFGPSGKLAGADIETYLLEKARVISQQALERSYHIFYQMMSGSVNGLK 181
+NS RFGKFIR HFGP GKLAGADIE+YLLEK+RVI QQ +ER+YHIFYQ++ G+ L
Sbjct: 235 NNSSRFGKFIRCHFGPQGKLAGADIESYLLEKSRVIYQQEIERNYHIFYQILYGAPKDLH 294
Query: 182 AICLL-SNDVMDYNIVSQGKTVIPGVDDGEEMRITDQAFDILGFTQEEKDNVYKITAAVM 358
LL SN DY ++G G+DD EE T+ A D LGF+ EEK ++YKI AA +
Sbjct: 295 DQLLLESNKTADYAYTAKGCERADGIDDVEEWANTELAADTLGFSAEEKLSMYKICAACL 354
Query: 359 HMGCMKFKQRGREEQAEADGTEDGDKVAKLLGVDCADLYKNLLKPRIKVGNEFVTQGRNK 538
H G KFKQR REEQAE +D DK + L+ + AD KN++KPRIKVG E+V QGRN
Sbjct: 355 HWGNSKFKQRPREEQAEVADPKDLDKTSFLMKLPGADFVKNIVKPRIKVGREYVNQGRNL 414
Query: 539 DQVINSVGALCKGIFDRLFKWLVKKCNETLDTKQKRQHFI 658
QV S+GAL K +++R+F WLV + N+TL TK +R FI
Sbjct: 415 QQVNYSIGALTKSLYERMFLWLVDRANQTLMTKDRRAFFI 454
>SB_29364| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 884
Score = 131 bits (317), Expect = 4e-31
Identities = 79/224 (35%), Positives = 120/224 (53%), Gaps = 15/224 (6%)
Frame = +2
Query: 2 DNSPRFGKFIRIHFGPSGKLAGADIETYLLEKARVISQQALERSYHIFYQMMSGSVNGLK 181
DNS RFGK+I +HF G + GA IE YLLEK+R++ Q ER+YHIFY+M++G K
Sbjct: 154 DNSSRFGKYIDVHFNKHGSIQGAKIEQYLLEKSRIVHQMLDERNYHIFYRMLAGMTPKEK 213
Query: 182 AICLLSNDVMDYNIVSQGKTV-IPGVDDGEEMRITDQAF------------DILGFTQEE 322
A+ L+ DV DY ++QG + G++D EE I A +L F + E
Sbjct: 214 ALLGLT-DVADYYYLTQGNCITCEGMNDAEEFAIIRGAMKVCNIEGKVISQQVLMFNEVE 272
Query: 323 KDNVYKITAAVMHMGCMKFKQRGREEQAEAD-GTED-GDKVAKLLGVDCADLYKNLLKPR 496
+++K+ AA++HMG ++F+ R+ D ED GD ++KLL +
Sbjct: 273 MMDIFKLVAAILHMGNLEFEGTERKTVDACDIADEDLGDIISKLLETPLEQMKVAFTSKS 332
Query: 497 IKVGNEFVTQGRNKDQVINSVGALCKGIFDRLFKWLVKKCNETL 628
E + +KD+ + A CKGI+ R+F W+V K N+ +
Sbjct: 333 TFARGEMIFTPVSKDKAKDIRDAFCKGIYGRVFVWIVNKINKAI 376
>SB_30334| Best HMM Match : Myosin_head (HMM E-Value=8.8e-12)
Length = 280
Score = 125 bits (302), Expect = 3e-29
Identities = 67/209 (32%), Positives = 115/209 (55%), Gaps = 3/209 (1%)
Frame = +2
Query: 5 NSPRFGKFIRIHFGPSGKLAGADIETYLLEKARVISQQALERSYHIFYQMMSGSVNGLKA 184
NS RFGK++ +HF + G I YLLE++R+ Q ER+YH+FY++ +G+ +K
Sbjct: 18 NSSRFGKYVEVHFNEKVIVVGGFISHYLLEQSRICMQSKGERNYHVFYRLCAGAPKQIKD 77
Query: 185 ICLLSNDVMDYNIVSQGKTVIPGVDDGEEMRITDQAFDILGFTQEEKDNVYKITAAVMHM 364
+ L+ D+N ++QG P +DD + + D + D +GF++EEK N+Y++ AAV+H+
Sbjct: 78 MLRLTR-AQDFNYLNQGSLSDPNLDDTSDFKRMDASMDNVGFSKEEKSNIYRVVAAVLHL 136
Query: 365 GCMKFKQRGREE---QAEADGTEDGDKVAKLLGVDCADLYKNLLKPRIKVGNEFVTQGRN 535
G + F+ Q + +++ + AKLLGV +L + L + G V
Sbjct: 137 GNIIFEDIDDTHGGCQVSSKCSDEVNITAKLLGVSPEELQQALTTRLMSAGGADVRVPLK 196
Query: 536 KDQVINSVGALCKGIFDRLFKWLVKKCNE 622
+Q + AL K I+ +LF +V + N+
Sbjct: 197 LEQAYAARDALAKSIYTKLFDHIVAQVNQ 225
>SB_45041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1278
Score = 119 bits (287), Expect = 2e-27
Identities = 71/221 (32%), Positives = 119/221 (53%), Gaps = 2/221 (0%)
Frame = +2
Query: 2 DNSPRFGKFIRIHFGPSGKLAGADIETYLLEKARVISQQALERSYHIFYQMMSG-SVNGL 178
DNS RFGK++ I F + + GA + TYLLEK+RV+ Q A ER+YH+FYQM + + +
Sbjct: 589 DNSSRFGKYLEISFDRNHHIIGAHMRTYLLEKSRVVFQAAEERNYHVFYQMCAACELPEM 648
Query: 179 KAICLLSNDVMDYNIVSQGKT-VIPGVDDGEEMRITDQAFDILGFTQEEKDNVYKITAAV 355
K L D +++ ++QG V+ +DD + +A ++G +E+ +++I +A+
Sbjct: 649 KDFRLAHPD--NFSYLNQGDAPVVDSIDDADCFEELREALSMVGINDDEQLMLFRILSAI 706
Query: 356 MHMGCMKFKQRGREEQAEADGTEDGDKVAKLLGVDCADLYKNLLKPRIKVGNEFVTQGRN 535
+H+G ++ Q G +E + + A LLG+D L K L +I E + + +
Sbjct: 707 LHLGNVEILQAGDDECTVEENDFHLEMTAVLLGIDKNQLRKWLCNRKIVTVGEVLIKPLS 766
Query: 536 KDQVINSVGALCKGIFDRLFKWLVKKCNETLDTKQKRQHFI 658
+ A+ K I+ +LFKW+V N TL + K FI
Sbjct: 767 ITEANYGREAISKRIYSQLFKWVVNTINCTLTSTSKPHSFI 807
>SB_25986| Best HMM Match : Myosin_head (HMM E-Value=1.4e-17)
Length = 1189
Score = 117 bits (282), Expect = 7e-27
Identities = 68/212 (32%), Positives = 111/212 (52%), Gaps = 3/212 (1%)
Frame = +2
Query: 2 DNSPRFGKFIRIHFGPSGKLAGADIETYLLEKARVISQQALERSYHIFYQMMSGSVNGLK 181
DNS RFGK+I +HF S + GA I+ YLLE++R+++Q ER+YHIFY+M++G K
Sbjct: 975 DNSSRFGKYIDVHFNDSWVIEGAKIDHYLLEQSRIVAQMPNERNYHIFYRMLAGMSPQEK 1034
Query: 182 AICLLSNDVMDYNIVSQGKTV-IPGVDDGEEMRITDQAFDILGFTQEEKDNVYKITAAVM 358
L++ DY +SQG + G+DD E + +A L FT+EE +++ AAV+
Sbjct: 1035 KSLHLTH-AQDYYYLSQGNCLTCEGMDDAYEYDVIRKAMTALWFTEEETQFIFRSIAAVL 1093
Query: 359 HMGCMKF--KQRGREEQAEADGTEDGDKVAKLLGVDCADLYKNLLKPRIKVGNEFVTQGR 532
H+G + F K E + E A LL V + + + E +
Sbjct: 1094 HLGNISFEAKMEDNIEACDVMNPETVAAAADLLQVPKEHMEEAFTRKSTFAEGEMIYSPV 1153
Query: 533 NKDQVINSVGALCKGIFDRLFKWLVKKCNETL 628
+ ++ + A KG++ ++F W+V K N ++
Sbjct: 1154 SVERATDIRDAFVKGLYSKVFIWIVNKINSSI 1185
>SB_50655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2033
Score = 101 bits (243), Expect = 4e-22
Identities = 66/209 (31%), Positives = 102/209 (48%)
Frame = +2
Query: 2 DNSPRFGKFIRIHFGPSGKLAGADIETYLLEKARVISQQALERSYHIFYQMMSGSVNGLK 181
DNS RFGK+I++ F +G + GA I YLLEK+RV Q + E ++HIFY + +G K
Sbjct: 153 DNSSRFGKYIQLKFH-AGTVVGAKISEYLLEKSRVAMQSSGEENFHIFYYLFAGLSQEEK 211
Query: 182 AICLLSNDVMDYNIVSQGKTVIPGVDDGEEMRITDQAFDILGFTQEEKDNVYKITAAVMH 361
L Y+ +S G + + A D++GF EE+++++ I +AV+
Sbjct: 212 KKYHLQTP-EKYSYLSNGWDRRKQKANQDHFGQLQNAMDLVGFLDEEQEDMFTILSAVLT 270
Query: 362 MGCMKFKQRGREEQAEADGTEDGDKVAKLLGVDCADLYKNLLKPRIKVGNEFVTQGRNKD 541
+G MKF++ E A+ AKLLGV L + L + + +
Sbjct: 271 LGNMKFEEGDHEGAVIANAHASLKTAAKLLGVKSDKLEEVLTSTTTVMRGSCIKRRLKPH 330
Query: 542 QVINSVGALCKGIFDRLFKWLVKKCNETL 628
Q + A K ++ RLF W+V K N L
Sbjct: 331 QAQDVRDATSKALYGRLFSWIVNKINHLL 359
>SB_34413| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 650
Score = 87.4 bits (207), Expect = 9e-18
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 7/224 (3%)
Frame = +2
Query: 2 DNSPRFGKFIRIHFGPSGKLAGADIETYLLEKARVISQQALERSYHIFYQMMSGSVNGLK 181
DNS RFGK++ I F G G I YLLEK ++ G+ + +
Sbjct: 157 DNSSRFGKYMDIDFDFKGDPIGGHIFNYLLEK------------------LLHGASDSMI 198
Query: 182 AICLLSNDVMDYNIVSQGKTV-IPGVDDGEEMRITDQAFDILGFTQEEKDNVYKITAAVM 358
L D M Y QGK I ++D ++ A +GF+ EE+ V+K+ AA++
Sbjct: 199 GEYGLERDAMLYYYTKQGKVPKISTINDSSLYKLNCDAMKSVGFSAEEQKTVWKLVAAIL 258
Query: 359 HM------GCMKFKQRGREEQAEADGTEDGDKVAKLLGVDCADLYKNLLKPRIKVGNEFV 520
H+ G + RG + + +AKLLG+ L + L + E +
Sbjct: 259 HLDFILSVGQCRIYTRGSRTGSSREQRR-ASNLAKLLGLSHEMLERALCYRVVAARGEVM 317
Query: 521 TQGRNKDQVINSVGALCKGIFDRLFKWLVKKCNETLDTKQKRQH 652
+G N+ + + AL K +DRLF W+V + N++++ + K++H
Sbjct: 318 EKGHNEKEAYHGRDALAKAAYDRLFSWIVSRINDSIEVRDKKEH 361
>SB_41091| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 862
Score = 79.8 bits (188), Expect = 2e-15
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 3/220 (1%)
Frame = +2
Query: 2 DNSPRFGKFIRIHFGPSGKLAGADIETYLLEKARVISQQALERSYHIFYQMMSGSVNGLK 181
+NS RFGK+I++ F ++ GA ++TYLLEK RV+ Q ER++HIFYQM +G
Sbjct: 242 ENSSRFGKYIQLQFNRQFQIVGAKLKTYLLEKTRVVHQAEGERNFHIFYQMSAG------ 295
Query: 182 AICLLSNDVMDYNIVSQGKTVIPGVDDGEEMRITDQAFDILGFTQEEKDNVYKITAAVMH 361
+ S + ++ ++ G D + T +A +G E++D ++K+ + +
Sbjct: 296 -MAYASRSTSKASAKARRRSSRWGGVDHQAFVETREAMRNIGIHDEQQDEIFKVLSGIKQ 354
Query: 362 MGCMKFKQRGREEQAEADGTEDGDKVAKLLGVDCADLYKNLLKPR---IKVGNEFVTQGR 532
+ + F + E+ E + + LL V CA+ L R K E +
Sbjct: 355 ICAVDFAK--EEDACIFTRPEKAREASALLSV-CAERLAQCLSTRRITSKGTGEVFMKPC 411
Query: 533 NKDQVINSVGALCKGIFDRLFKWLVKKCNETLDTKQKRQH 652
+ + + K I+ RLF W+V N ++ + +H
Sbjct: 412 SVHESEARRDCVAKVIYARLFDWIVDFINTSIKAPRHSKH 451
>SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1805
Score = 78.2 bits (184), Expect = 6e-15
Identities = 43/91 (47%), Positives = 55/91 (60%)
Frame = +2
Query: 2 DNSPRFGKFIRIHFGPSGKLAGADIETYLLEKARVISQQALERSYHIFYQMMSGSVNGLK 181
DNS RFGKFIRI+F SG +A LLEK+R I Q + ER++HIFYQMM+G +
Sbjct: 293 DNSSRFGKFIRINFDASGFIAD------LLEKSRAIRQNSNERTFHIFYQMMAGLEAKER 346
Query: 182 AICLLSNDVMDYNIVSQGKTVIPGVDDGEEM 274
LL DY +S G +PG+DD E+
Sbjct: 347 GEILLGKPT-DYRFLSNGNMPVPGIDDAAEL 376
Score = 69.7 bits (163), Expect = 2e-12
Identities = 31/76 (40%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Frame = +2
Query: 434 KVAKLLGVDCADLYKNLLKPRIKVGNEFVTQGRNKDQVINSVGALCKGIFDRLFKWLVKK 613
K+ LL + + + +LKPR+KVG ++V + KDQ +SV A+ K +++RLFKW+V+K
Sbjct: 391 KICHLLSMPVTEFTRAILKPRVKVGRDYVQRAVTKDQADSSVEAIAKALYERLFKWVVQK 450
Query: 614 CNETLD-TKQKRQHFI 658
N+++D TK++ FI
Sbjct: 451 INKSMDRTKREGASFI 466
>SB_32548| Best HMM Match : Myosin_head (HMM E-Value=2.9e-17)
Length = 546
Score = 74.5 bits (175), Expect = 7e-14
Identities = 36/129 (27%), Positives = 70/129 (54%), Gaps = 1/129 (0%)
Frame = +2
Query: 65 GADIETYLLEKARVISQQALERSYHIFYQMMSGSVNGLKAICLLSNDVMDYNIVSQGKTV 244
G I YLLEK+RV+ Q ER++HIFYQ++ G+ + L L D Y ++QG V
Sbjct: 147 GGHILNYLLEKSRVVHQAKGERNFHIFYQLLQGAEHELLEALELERDPNHYFYLNQGNCV 206
Query: 245 -IPGVDDGEEMRITDQAFDILGFTQEEKDNVYKITAAVMHMGCMKFKQRGREEQAEADGT 421
+ ++D E ++ +A ++ T + + ++ I A+++H+G + F ++ E +
Sbjct: 207 TVSTINDNVEFKVVKEALSVIDMTTDVQLALFSIVASILHLGSVNFLEKEGEHDITLENA 266
Query: 422 EDGDKVAKL 448
+ ++K+
Sbjct: 267 RPVNIISKV 275
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/69 (34%), Positives = 37/69 (53%)
Frame = +2
Query: 431 DKVAKLLGVDCADLYKNLLKPRIKVGNEFVTQGRNKDQVINSVGALCKGIFDRLFKWLVK 610
+ ++KLLG L K L ++ E V +KDQ I + AL K +DR+F W+V+
Sbjct: 478 NNISKLLGCPEFILEKALTARTVEAKGEKVRTPLSKDQAIYARDALAKATYDRMFTWVVR 537
Query: 611 KCNETLDTK 637
N +L +K
Sbjct: 538 SINTSLASK 546
>SB_5693| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1429
Score = 69.3 bits (162), Expect = 3e-12
Identities = 28/54 (51%), Positives = 39/54 (72%)
Frame = +2
Query: 2 DNSPRFGKFIRIHFGPSGKLAGADIETYLLEKARVISQQALERSYHIFYQMMSG 163
DNS RFGK++ I F G + GA I YLLE++R++ Q ER+YHIFY+M++G
Sbjct: 121 DNSSRFGKYLEIFFDSEGSICGARISEYLLERSRIVGQSLEERNYHIFYEMLAG 174
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 61.3 bits (142), Expect = 7e-10
Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 8/155 (5%)
Frame = +2
Query: 176 LKAICLLSNDV---MDYNIVSQ-GKTVIPGVDDGEEMRITDQAFDILGFTQEEKDNVYKI 343
++ IC L D+ Y ++Q G I G DD + T A +++G ++ V K+
Sbjct: 152 IRKICELEIDLGPAESYKYLNQTGVYTIEGTDDVSDYAATINAMEVIGIASSTRNTVLKL 211
Query: 344 TAAVMHMGCMKFKQRGREEQAEADGTEDGDKVAKLLGVDCADLYKNLLKPRIKV---GNE 514
A V+H+G ++F + + QA D ++LL VD L L ++ G
Sbjct: 212 VATVLHLGNIQFTE--EDNQAVPVDVSMLDAPSRLLSVDKDILLDKLTSYSMETRWGGKV 269
Query: 515 FVTQGR-NKDQVINSVGALCKGIFDRLFKWLVKKC 616
VT+ NKDQ + + AL K IF +LF++LV+ C
Sbjct: 270 EVTKKTLNKDQAVIARDALAKAIFFQLFEYLVELC 304
>SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2463
Score = 57.6 bits (133), Expect = 8e-09
Identities = 34/123 (27%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
Frame = +2
Query: 5 NSPRFGKFIRIHFGPSGKLAGADIETYLLEKARVISQQALERSYHIFYQMMSGSVNGLKA 184
N+ RF + + F +G L ++T+LLEK+RV+ Q+ E +++IFY ++SGS L+
Sbjct: 499 NATRFTLLVSLDFDSAGGLTCGSLQTFLLEKSRVVRQKEGEGTFNIFYYLLSGSDPKLRK 558
Query: 185 ICLLSNDVMDYN--IVSQGKTVIPGVDDGEEMRITDQAFDILGFTQEEKDNVYKITAAVM 358
LL + + N I+ + + A ++LG + +E ++ AA+
Sbjct: 559 ELLLDAALKEPNDFILGFDPASADSAKCSGKWTELEFALNMLGISADEAKAIWSTLAAIY 618
Query: 359 HMG 367
H+G
Sbjct: 619 HLG 621
>SB_43126| Best HMM Match : Myosin_head (HMM E-Value=4.1e-32)
Length = 898
Score = 57.2 bits (132), Expect = 1e-08
Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 5/143 (3%)
Frame = +2
Query: 215 YNIVSQGKTVIPGVDDGEEMRITDQAFDILGFTQEEKDNVYKITAAVMHMGCMKFKQRGR 394
Y + G + G DD +E T +A D++G + E + +V + A V+H+G + F++ G
Sbjct: 598 YYLNQSGTYTVDGTDDVKEYEETRKAMDVIGISDEIQADVLALVAGVLHLGNISFREDG- 656
Query: 395 EEQAEADGTEDGDKVAKLLGVDCADLYKNLLKPRI---KVG--NEFVTQGRNKDQVINSV 559
A E A L VD A+L K L R+ K G E + N +Q +
Sbjct: 657 -NYAVPLDEEFLSYPAYLFAVD-AELLKEKLTSRVMDSKWGGKTETINMRLNVEQACYTR 714
Query: 560 GALCKGIFDRLFKWLVKKCNETL 628
AL K ++ R+F +LV+ N+ +
Sbjct: 715 DALAKALYTRMFDYLVQAVNKAM 737
>SB_25537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 494
Score = 44.4 bits (100), Expect = 8e-05
Identities = 30/106 (28%), Positives = 58/106 (54%), Gaps = 4/106 (3%)
Frame = +2
Query: 119 ALERSYHIFYQMMSGSVNGLKAICLLSNDVMDYNIVSQGKT-VIPGVDDGEEMRITDQAF 295
A+ +YH+FY +++G+ LKA L ND +++ ++Q K I G+D+ E Q+
Sbjct: 29 AVTGNYHVFYYLLAGASAELKAELHL-NDPREFSYLNQSKCYTIEGIDESYEFLRLKQSM 87
Query: 296 DILGFTQE-EKDNVYKITAAVMH--MGCMKFKQRGREEQAEADGTE 424
+++GFT + +K Y + ++ +GC++ K +E DG +
Sbjct: 88 EMVGFTADVQKRCCYWLFGILIGPVIGCLQ-KPSREDEVVVKDGQD 132
>SB_53826| Best HMM Match : HipA_C (HMM E-Value=2.7)
Length = 160
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = +2
Query: 215 YNIVSQGKTVIPGVDDGEEMRITDQAFDILGFTQEEKDNVYKITAAVMHMGCMKFKQRG 391
Y + G + G DD +E T +A D++G + E + +V + A V+H+G + F++ G
Sbjct: 12 YYLNQSGTYTVDGTDDVKEYEETRKAMDVIGISDEIQADVLALVAGVLHLGNISFREDG 70
>SB_42005| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 621
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +2
Query: 2 DNSPRFGKFIRIHFGPSGKLAGADIETYLLEKARVISQQALERSYHIFYQMMSGS 166
+NS RFGK+I + F G++ RV+ Q ER+YHIFY +++G+
Sbjct: 104 NNSSRFGKYIHLQFNAKGRMN------------RVVRQNPGERNYHIFYSLLAGA 146
>SB_40059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 202
Score = 36.3 bits (80), Expect = 0.022
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +2
Query: 125 ERSYHIFYQMMSGSVNGLKAICLLSNDVMDYNIVSQGKTV-IPGVDDGEEMRITDQAFDI 301
ER+YHIFY+M++G K L++ DY +SQG + G+DD E + +A +
Sbjct: 17 ERNYHIFYRMLAGMSPQEKKSLHLTH-AQDYYYLSQGNCLTCEGMDDAYEYDVIRKAMTV 75
>SB_32012| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 69
Score = 35.5 bits (78), Expect = 0.039
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +2
Query: 86 LLEKARVISQQALERSYHIFYQMMSGSVNGL 178
LLEK+R++ Q ER++HIFY ++ G+ + L
Sbjct: 37 LLEKSRLVYQNKGERNFHIFYHLLRGASDNL 67
>SB_4921| Best HMM Match : Myosin_head (HMM E-Value=7.39998e-41)
Length = 1017
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = +2
Query: 443 KLLGVDCADLYKNLLKPRIKVGNEFVTQGRNKDQVINSVGALCKGIFDRLFKWLVKKCNE 622
++L D L +L + ++ E V N Q + AL K ++ RLF W+V + N+
Sbjct: 155 EMLQCDVELLLNSLRERTVETKTERVHTPLNVAQASYARDALAKAVYQRLFAWIVDRVND 214
Query: 623 TLDTKQKRQHFI 658
++ Q I
Sbjct: 215 SIQDNSFEQFII 226
>SB_11541| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 78
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = +2
Query: 125 ERSYHIFYQMMSGSVNGLKAICLLSNDVMDYNIVSQG----KTVIPGVDDGEEMRITDQA 292
ER++HIFY M++G + K +N + G + V+ + + + +
Sbjct: 3 ERNFHIFYYMIAGLAHQKKLEKYSFKLYSQHNYLQTGGRNLQDVVCTLGNRKRFEEVQRC 62
Query: 293 FDILGFTQE 319
FD++GFT +
Sbjct: 63 FDVIGFTHD 71
>SB_54716| Best HMM Match : S-antigen (HMM E-Value=1.8)
Length = 255
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/61 (26%), Positives = 26/61 (42%)
Frame = +2
Query: 254 VDDGEEMRITDQAFDILGFTQEEKDNVYKITAAVMHMGCMKFKQRGREEQAEADGTEDGD 433
+D+ EEM + A ++ D V A + M RG++E D +DGD
Sbjct: 112 LDEPEEMETDEPAIKVIVKNDRSTDKVKSDVPARLRMRMYADDIRGKDEGDHDDDEDDGD 171
Query: 434 K 436
+
Sbjct: 172 R 172
>SB_31410| Best HMM Match : PDZ (HMM E-Value=1.1e-15)
Length = 556
Score = 28.7 bits (61), Expect = 4.4
Identities = 28/128 (21%), Positives = 54/128 (42%), Gaps = 3/128 (2%)
Frame = +2
Query: 284 DQAFDILGFTQEEKDNV--YKITAAVMHMGC-MKFKQRGREEQAEADGTEDGDKVAKLLG 454
+ F ++ + + D V + I H GC + Q + QAE G GD++ ++ G
Sbjct: 124 ESMFKVVTLVKTDPDQVLGFSIRGGREH-GCGVYISQVDSDSQAEKQGLHLGDQIIEVNG 182
Query: 455 VDCADLYKNLLKPRIKVGNEFVTQGRNKDQVINSVGALCKGIFDRLFKWLVKKCNETLDT 634
+D + +N + ++ R +Q VG + D+ F+ + K E +D
Sbjct: 183 IDFEQIAQNSAINLLSSLSKMKLVIRTGEQAGFRVGDQILNVNDKSFENI--KHKEAVDF 240
Query: 635 KQKRQHFI 658
+ +H I
Sbjct: 241 IKSNKHII 248
>SB_34998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +2
Query: 365 GCMKFKQRGREEQAEADGTEDGDKVAKLLGVDCADLYKNLLKPRIKVGNEFVTQGRNKDQ 544
G +K ++G+ E+ +G L V +Y+N K R+KV N FV + K +
Sbjct: 20 GAVKSSRQGKVEK-HCEGPMCHTAPGGQLWVTSGTVYRNTYKKRVKVHNSFVKPPQKKRR 78
Query: 545 VI 550
I
Sbjct: 79 SI 80
>SB_11425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 314 QEEKDNVYKITAAVMHMGCMKFKQRGREEQAEAD 415
++E+ N +KITA + K+K+R + QA+ D
Sbjct: 90 EDEETNSFKITAEEIAKNLEKYKKRPAKRQADPD 123
>SB_31944| Best HMM Match : ET (HMM E-Value=0.86)
Length = 152
Score = 27.9 bits (59), Expect = 7.7
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +2
Query: 563 ALCKGIFDRLFKWLVKKCNETLDTKQKRQHF 655
A KG++ ++F W+V K N ++ + H+
Sbjct: 32 AFVKGLYSKVFIWIVNKINSSIYKPRGTSHY 62
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,759,023
Number of Sequences: 59808
Number of extensions: 402693
Number of successful extensions: 1227
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1209
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1693527500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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