Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30044X
(564 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 217 7e-57
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 215 3e-56
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 213 6e-56
SB_56| Best HMM Match : Actin (HMM E-Value=0) 213 6e-56
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 213 8e-56
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 211 3e-55
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 191 3e-49
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 75 4e-14
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 68 5e-12
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 8e-08
SB_54| Best HMM Match : Actin (HMM E-Value=0) 45 4e-05
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 39 0.003
SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054) 33 0.12
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 2.0
SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85) 29 3.5
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 28 4.6
SB_41631| Best HMM Match : Ank (HMM E-Value=0.00018) 28 4.6
SB_8335| Best HMM Match : Dehydrin (HMM E-Value=7.2) 28 4.6
SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_19464| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_20153| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 217 bits (529), Expect = 7e-57
Identities = 100/109 (91%), Positives = 104/109 (95%)
Frame = -1
Query: 564 LGMESCGIHETVXNSIMKCDVDIRKDLYANAVMSGGTTMYPGIADRMQKEITALAPSTIK 385
LGMES GIHET NSIMKCDVDIRKDLYAN VMSGGTTMYPG+ADRMQKEI+ALAPST+K
Sbjct: 241 LGMESSGIHETTYNSIMKCDVDIRKDLYANTVMSGGTTMYPGLADRMQKEISALAPSTMK 300
Query: 384 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 238
IKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 301 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 349
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 215 bits (524), Expect = 3e-56
Identities = 99/109 (90%), Positives = 103/109 (94%)
Frame = -1
Query: 564 LGMESCGIHETVXNSIMKCDVDIRKDLYANAVMSGGTTMYPGIADRMQKEITALAPSTIK 385
LGMES GIHET NSIMKCDVDIRKDLYAN V+SGGTTMYPGIADRMQKEI+ALAP T+K
Sbjct: 230 LGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEISALAPPTMK 289
Query: 384 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 238
IKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 290 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 338
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 213 bits (521), Expect = 6e-56
Identities = 98/109 (89%), Positives = 103/109 (94%)
Frame = -1
Query: 564 LGMESCGIHETVXNSIMKCDVDIRKDLYANAVMSGGTTMYPGIADRMQKEITALAPSTIK 385
LGMES GIHET NSIMKCDVDIRKDLYAN V+SGG+TMYPGIADRMQKEIT+LAP T+K
Sbjct: 268 LGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMK 327
Query: 384 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 238
IKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 328 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 213 bits (521), Expect = 6e-56
Identities = 98/109 (89%), Positives = 103/109 (94%)
Frame = -1
Query: 564 LGMESCGIHETVXNSIMKCDVDIRKDLYANAVMSGGTTMYPGIADRMQKEITALAPSTIK 385
LGMES GIHET NSIMKCDVDIRKDLYAN V+SGG+TMYPGIADRMQKEIT+LAP T+K
Sbjct: 267 LGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMK 326
Query: 384 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 238
IKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 327 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 213 bits (520), Expect = 8e-56
Identities = 98/109 (89%), Positives = 103/109 (94%)
Frame = -1
Query: 564 LGMESCGIHETVXNSIMKCDVDIRKDLYANAVMSGGTTMYPGIADRMQKEITALAPSTIK 385
LGMES GIHET NSIMKCDVDIRKDLYAN V+SGG+TMYPGIADRMQKEI+ALAP T+K
Sbjct: 268 LGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEISALAPPTMK 327
Query: 384 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 238
IKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 328 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 211 bits (516), Expect = 3e-55
Identities = 97/109 (88%), Positives = 103/109 (94%)
Frame = -1
Query: 564 LGMESCGIHETVXNSIMKCDVDIRKDLYANAVMSGGTTMYPGIADRMQKEITALAPSTIK 385
LGMES GIHET NSIMKCDVDIRKDLYAN V+SGG+TM+PGIADRMQKEI+ALAP T+K
Sbjct: 267 LGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEISALAPPTMK 326
Query: 384 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 238
IKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 327 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 191 bits (466), Expect = 3e-49
Identities = 86/109 (78%), Positives = 98/109 (89%)
Frame = -1
Query: 564 LGMESCGIHETVXNSIMKCDVDIRKDLYANAVMSGGTTMYPGIADRMQKEITALAPSTIK 385
LGME+ GIHE + N IMKCDVDIRKDLY+N V+SGG+TM+PGIADRMQKEI LA +++K
Sbjct: 41 LGMEAPGIHEAIYNCIMKCDVDIRKDLYSNCVLSGGSTMFPGIADRMQKEIAMLANASMK 100
Query: 384 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 238
+K+IAPPERKYSVWIGGSILASLSTFQQMWI+KEEY E GP IVHRKCF
Sbjct: 101 VKVIAPPERKYSVWIGGSILASLSTFQQMWIAKEEYHEYGPPIVHRKCF 149
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 74.9 bits (176), Expect = 4e-14
Identities = 40/118 (33%), Positives = 62/118 (52%), Gaps = 16/118 (13%)
Frame = -1
Query: 543 IHETVXNSIMKCDVDIRKDLYANAVMSGGTTMYPGIADRMQKEIT--------------- 409
+ E V N I C +D+R+ LY N V+SGG+TM+ R+Q++I
Sbjct: 223 LSEVVDNVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDIKRTVDARLKMSETLSG 282
Query: 408 -ALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 238
+ P I+ ++I+ ++Y+VW GGS+LAS F + +K +YDE GP I F
Sbjct: 283 GRIKPKPIETQVISHHMQRYAVWFGGSMLASTPEFYSVCHTKADYDEHGPSICRHNPF 340
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 68.1 bits (159), Expect = 5e-12
Identities = 29/85 (34%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Frame = -1
Query: 561 GMESCGIHETVXNSIMKCDVDIRKDLYANAVMSGGTTMYPGIADRMQKEITALAPSTIKI 382
G + G+ + V S+ D+DIR L+ + +++GG T+ G +R+ +E+ + P ++++
Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRL 205
Query: 381 KII---APPERKYSVWIGGSILASL 316
K+I + E++++ WIGGSILASL
Sbjct: 206 KLISNNSSVEKRFNPWIGGSILASL 230
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 60.1 bits (139), Expect = 1e-09
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 29/129 (22%)
Frame = -1
Query: 564 LGMESCGIHETVXNSIMKCDVDIRKDLYANAVMSGGTTMYPGIADRMQKEITAL------ 403
+ +E G+ E + N+I D+D R + Y + V+SGG+TMYPG+ R+++EI L
Sbjct: 271 INVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLEREIKQLYLERVL 330
Query: 402 ---------------APSTI-----KIKI-IAPP-ERKYSVWIGGSILAS-LSTFQQMWI 292
P T K KI I P RK+ V++GG++LA + W+
Sbjct: 331 KGDTSKLSSGMGMEQIPLTADYLLQKFKIRIEDPPRRKHMVFMGGAVLADIMKDKDSFWM 390
Query: 291 SKEEYDESG 265
+++EY+E G
Sbjct: 391 TRKEYEEKG 399
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 54.0 bits (124), Expect = 8e-08
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Frame = -1
Query: 555 ESCGIHETVXNSIMKCDVDIRKDLYANAVMSGGTTMYPGIADRMQKEITALAPST----- 391
E + + +S++ C +D RK L N V+ GGT M PG R+ +EI L S
Sbjct: 54 EEKSLATALLDSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDK 113
Query: 390 --IK-IKIIAPP-ERKYSVWIGGSILASLSTFQQMWISKEEYDE 271
IK +K+ PP + W+GG+I SL ++E Y +
Sbjct: 114 LFIKTVKMHQPPVNANITAWLGGAIFGSLEVLADRSTTRERYQQ 157
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 45.2 bits (102), Expect = 4e-05
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = -1
Query: 564 LGMESCGIHETVXNSIMKCDVDIRKDLYANAVMSG 460
LG + GIHE++ SI KCD+D+R +L+ N V+SG
Sbjct: 2312 LGRDIDGIHESIFKSIKKCDIDLRAELFHNIVLSG 2346
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/35 (45%), Positives = 26/35 (74%)
Frame = -1
Query: 543 IHETVXNSIMKCDVDIRKDLYANAVMSGGTTMYPG 439
I E + +I K D+D+R+ LY+N V+SGG+T++ G
Sbjct: 257 IIEVLAFAIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054)
Length = 1079
Score = 33.5 bits (73), Expect = 0.12
Identities = 22/75 (29%), Positives = 38/75 (50%)
Frame = -3
Query: 547 RHPRDRXQLHHEVRRRHP*GPVRQRRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRS 368
R P+DR + HH RR H + R+H R H R++R+ +G+ L+ +D
Sbjct: 830 RPPQDRHRRHHHRRRHH---NNKHRKHSR-EHSRRRHQRKHHKGNDAQETLEEIFED--D 883
Query: 367 PREEVLRMDRWIHPG 323
R+E +D +++ G
Sbjct: 884 ARDEKENVDEFVNGG 898
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +2
Query: 329 MDPPIHTEYFLSGGAMILILMVEGARAVISFCILSAIPGYMV-VPPDM-TALAYRSLRMS 502
+DPP+ +Y L+GG ++ ++ FCI G++V PP+ +A+ R++
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCIFQ---GFVVPTPPECNSAIVLPDARIT 814
Query: 503 TS 508
S
Sbjct: 815 AS 816
>SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 29.1 bits (62), Expect = 2.6
Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Frame = -3
Query: 547 RHPRDRXQLHHEVRRRHP*GPVRQRRHVRWYHHVPRYR--RQDAEGDHRPR--ALDHQDQ 380
RH R R + R RH RH H R++ R + R R H+
Sbjct: 23 RHERSRHETRQHERSRHKTSRHESSRHKTSRHERSRHKTSRHETSRHERSRHETRQHERS 82
Query: 379 DHRSPREEVLRMDRWIH 329
H++ R E R ++ H
Sbjct: 83 RHKTSRHETSRHEKSRH 99
>SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/73 (24%), Positives = 27/73 (36%)
Frame = -3
Query: 547 RHPRDRXQLHHEVRRRHP*GPVRQRRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRS 368
RH R R + R RH RH H R++ E R+ H+ + H
Sbjct: 63 RHERSRHETRQHERSRHKTSRHESSRHKTSRHGRSRHKTSRHETSRHERS-RHETRQHER 121
Query: 367 PREEVLRMDRWIH 329
R + R ++ H
Sbjct: 122 SRHKTSRHEKSRH 134
Score = 27.9 bits (59), Expect = 6.1
Identities = 19/73 (26%), Positives = 26/73 (35%)
Frame = -3
Query: 547 RHPRDRXQLHHEVRRRHP*GPVRQRRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRS 368
+H R R + RH + RH H R+ R E R+ H+ H
Sbjct: 73 QHERSRHKTSRHESSRHKTSRHGRSRHKTSRHETSRHERSRHETRQHERS-RHKTSRHEK 131
Query: 367 PREEVLRMDRWIH 329
R E R +R H
Sbjct: 132 SRHETSRHERSRH 144
>SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85)
Length = 647
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/65 (23%), Positives = 33/65 (50%)
Frame = -3
Query: 550 VRHPRDRXQLHHEVRRRHP*GPVRQRRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHR 371
++HP ++ H + ++ P +++ ++ HHVP + +A G+ R Q+ D+
Sbjct: 550 IQHPVEKAIQHAQEKKYQP---ELEKKTIK-SHHVPGQDKTEARGEERIAVWSTQNGDYY 605
Query: 370 SPREE 356
R+E
Sbjct: 606 DQRDE 610
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 28.7 bits (61), Expect = 3.5
Identities = 20/57 (35%), Positives = 24/57 (42%)
Frame = -3
Query: 541 PRDRXQLHHEVRRRHP*GPVRQRRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHR 371
PRDR + E RRR P R+ R + Y PR RR+ R R D R
Sbjct: 854 PRDRRRRSPEHRRRREASPPRRDR--KRYDSPPRRRRRSPSPPPRRRRRDSYSPSRR 908
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 477 NAVMSGGTTMYPGIADRMQKEITALAP 397
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 28.3 bits (60), Expect = 4.6
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = -3
Query: 550 VRHPRDRXQLHHEVRRRHP*GPV-RQRRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDH 374
V HPR R +H HP V R+ V + + RQD DH + DH QD
Sbjct: 599 VVHPR-RDVVHPRRDVVHPRQDVVHPRQDVDHHRQDVDHHRQDV--DHHRQDADHHRQDV 655
Query: 373 RSPREEVL 350
PR++V+
Sbjct: 656 VHPRQDVV 663
>SB_41631| Best HMM Match : Ank (HMM E-Value=0.00018)
Length = 353
Score = 28.3 bits (60), Expect = 4.6
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Frame = -3
Query: 478 QRRHVRWY--HHVPRYRRQDAEGDHRPRALDHQDQDH---RSPREEVLRMDRWIHPGFPV 314
+RR R Y HH +R +++ D R R+ D++ Q H R REE + P P+
Sbjct: 162 ERRKSREYDSHHHSDHRDEESHRDGRKRSKDYEKQHHNDRRLSREEGSYREGHRSPSQPL 221
Query: 313 HLP 305
P
Sbjct: 222 FQP 224
>SB_8335| Best HMM Match : Dehydrin (HMM E-Value=7.2)
Length = 531
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/54 (35%), Positives = 21/54 (38%)
Frame = -3
Query: 508 RRRHP*GPVRQRRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVLR 347
RRR P P R H PR R + DHR R + D R EV R
Sbjct: 191 RRRDPDWPREDRPRDPRDHVDPRDRDLERTRDHRDRDFERSRHDRRERDREVER 244
>SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 480 ANAVMSGGTTMYPGIADRMQKEITALAP-STIKIKIIAPPE 361
AN V+ + + +R+ KE+ L +K KIIAPPE
Sbjct: 44 ANPVIHPARKVPVSLGERLDKELNRLTELGIVKEKIIAPPE 84
>SB_19464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1653
Score = 27.9 bits (59), Expect = 6.1
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = -3
Query: 547 RHPRDRXQLHHEVRRRHP*GPVRQRRHVRWYHHVPRYR---RQDAEGDHRPRALDHQDQD 377
RH R+R + R R RR R R R R++ EG+ RPR+ + Q +
Sbjct: 605 RHGRERSRERPRSRERPRSRERSDRRDERPQRRGSRGRSPGRREREGERRPRSAERQSRR 664
Query: 376 HRSPREE 356
P+ E
Sbjct: 665 QDEPKGE 671
>SB_20153| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 480 ANAVMSGGTTMYPGIADRMQKEITALAP-STIKIKIIAPPE 361
AN V+ + + +R+ KE+ L +K KIIAPPE
Sbjct: 44 ANPVIHPARKVPVSLGERLDKELNHLTELGIVKEKIIAPPE 84
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,180,849
Number of Sequences: 59808
Number of extensions: 307096
Number of successful extensions: 1043
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1325051197
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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