Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30043X
(329 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 113 2e-26
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 111 1e-25
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 111 1e-25
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 111 1e-25
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 5e-25
SB_56| Best HMM Match : Actin (HMM E-Value=0) 109 5e-25
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 97 2e-21
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 45 2e-05
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.003
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 30 0.52
SB_28367| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.2
SB_46388| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.6
SB_21641| Best HMM Match : MPPN (HMM E-Value=3.5) 27 3.7
SB_15694| Best HMM Match : RNA_POL_M_15KD (HMM E-Value=2.9) 27 3.7
SB_17462| Best HMM Match : DUF1168 (HMM E-Value=0.37) 27 3.7
SB_46128| Best HMM Match : VQ (HMM E-Value=4.6) 27 4.9
SB_8349| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.9
SB_28298| Best HMM Match : IncA (HMM E-Value=0.32) 26 6.5
SB_54916| Best HMM Match : TB2_DP1_HVA22 (HMM E-Value=4.76441e-44) 26 8.5
SB_46210| Best HMM Match : CMAS (HMM E-Value=2.6e-10) 26 8.5
SB_59641| Best HMM Match : PAE (HMM E-Value=0) 26 8.5
SB_58889| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.5
SB_33309| Best HMM Match : zf-C2H2 (HMM E-Value=0) 26 8.5
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 113 bits (273), Expect = 2e-26
Identities = 53/58 (91%), Positives = 55/58 (94%)
Frame = -2
Query: 325 SALAPSTIKIKIIAPSERKDSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 152
SALAPST+KIKIIAP ERK SVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 292 SALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 349
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 111 bits (268), Expect = 1e-25
Identities = 52/58 (89%), Positives = 54/58 (93%)
Frame = -2
Query: 325 SALAPSTIKIKIIAPSERKDSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 152
SALAP T+KIKIIAP ERK SVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 281 SALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 338
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 111 bits (268), Expect = 1e-25
Identities = 52/58 (89%), Positives = 54/58 (93%)
Frame = -2
Query: 325 SALAPSTIKIKIIAPSERKDSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 152
SALAP T+KIKIIAP ERK SVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 318 SALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 111 bits (268), Expect = 1e-25
Identities = 52/58 (89%), Positives = 54/58 (93%)
Frame = -2
Query: 325 SALAPSTIKIKIIAPSERKDSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 152
SALAP T+KIKIIAP ERK SVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 319 SALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 109 bits (262), Expect = 5e-25
Identities = 50/58 (86%), Positives = 54/58 (93%)
Frame = -2
Query: 325 SALAPSTIKIKIIAPSERKDSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 152
++LAP T+KIKIIAP ERK SVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 319 TSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 109 bits (262), Expect = 5e-25
Identities = 50/58 (86%), Positives = 54/58 (93%)
Frame = -2
Query: 325 SALAPSTIKIKIIAPSERKDSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 152
++LAP T+KIKIIAP ERK SVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 318 TSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 97.5 bits (232), Expect = 2e-21
Identities = 44/56 (78%), Positives = 50/56 (89%)
Frame = -2
Query: 319 LAPSTIKIKIIAPSERKDSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 152
LA +++K+K+IAP ERK SVWIGGSILASLSTFQQMWI+KEEY E GP IVHRKCF
Sbjct: 94 LANASMKVKVIAPPERKYSVWIGGSILASLSTFQQMWIAKEEYHEYGPPIVHRKCF 149
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 44.8 bits (101), Expect = 2e-05
Identities = 20/56 (35%), Positives = 32/56 (57%)
Frame = -2
Query: 319 LAPSTIKIKIIAPSERKDSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 152
+ P I+ ++I+ ++ +VW GGS+LAS F + +K +YDE GP I F
Sbjct: 285 IKPKPIETQVISHHMQRYAVWFGGSMLASTPEFYSVCHTKADYDEHGPSICRHNPF 340
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 37.1 bits (82), Expect = 0.003
Identities = 16/42 (38%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = -2
Query: 301 KIKIIAPSERKDSVWIGGSILASLSTFQQ-MWISKEEYDESG 179
KI+I P RK V++GG++LA + + W++++EY+E G
Sbjct: 358 KIRIEDPPRRKHMVFMGGAVLADIMKDKDSFWMTRKEYEEKG 399
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 29.9 bits (64), Expect = 0.52
Identities = 14/31 (45%), Positives = 24/31 (77%), Gaps = 3/31 (9%)
Frame = -2
Query: 313 PSTIKIKIIAPS---ERKDSVWIGGSILASL 230
P ++++K+I+ + E++ + WIGGSILASL
Sbjct: 200 PPSMRLKLISNNSSVEKRFNPWIGGSILASL 230
>SB_28367| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 153
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = -2
Query: 319 LAPSTIKIKIIAPSERKDSVWIGGSILASLSTFQQMWISK 200
L TI ++ I P+E + V +G +IL S++ FQ++ K
Sbjct: 102 LIACTIFLEFILPAESGERVGLGITILLSMAVFQELTSEK 141
>SB_46388| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1084
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 153 KHLRWTMPGPDSSYSSFE-IHICWKVDRDARMDP 251
K++RW PD + SSF+ + + V+RD +DP
Sbjct: 176 KYVRWPPLYPDWNQSSFDLVEVLSAVNRDLNIDP 209
>SB_21641| Best HMM Match : MPPN (HMM E-Value=3.5)
Length = 177
Score = 27.1 bits (57), Expect = 3.7
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 317 SALDHQDQDHSSLREKGLRMDRWIHPGIPVHLPADVDLE 201
S +HQ HS KGLR D + G+ VH+ D+E
Sbjct: 2 SGREHQTS-HSPAVGKGLRTDNHVLKGVVVHVIYVTDIE 39
>SB_15694| Best HMM Match : RNA_POL_M_15KD (HMM E-Value=2.9)
Length = 239
Score = 27.1 bits (57), Expect = 3.7
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 290 HSSLREKGLRMDRWIHPGIPVH 225
H+ L E+ +R +W PG P H
Sbjct: 152 HTDLAEEEVRRKKWFRPGSPPH 173
>SB_17462| Best HMM Match : DUF1168 (HMM E-Value=0.37)
Length = 352
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 56 SGITRYNVLTVAFRTRTSTTPHSTGVT 136
+GIT N++T A T TSTT + VT
Sbjct: 294 NGITNTNIITTATTTTTSTTISTITVT 320
>SB_46128| Best HMM Match : VQ (HMM E-Value=4.6)
Length = 333
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 65 TRYNVLTVAFRTRTSTTPHSTGVT 136
+RYN+ T +FR T+TT ST VT
Sbjct: 270 SRYNIETASFRHATTTT-QSTSVT 292
>SB_8349| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1104
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 139 PRDPGAVWCCARPSSERNRQYVVPSDT 59
P DPG++W PS E ++Y P DT
Sbjct: 262 PNDPGSLWNFVSPSME--KRYGNPRDT 286
>SB_28298| Best HMM Match : IncA (HMM E-Value=0.32)
Length = 225
Score = 26.2 bits (55), Expect = 6.5
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +2
Query: 44 DVQFSGITRYNVLTVAFRTRTSTTPHSTG 130
DV GI+ Y L A +TST P STG
Sbjct: 5 DVSSGGISIYPPLPSAHPPQTSTAPASTG 33
>SB_54916| Best HMM Match : TB2_DP1_HVA22 (HMM E-Value=4.76441e-44)
Length = 210
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -1
Query: 329 LLRPSALDHQDQDHSSLREKGLRMDRW 249
+++P L HQ Q S+L + G +MD++
Sbjct: 146 VIKPFVLRHQSQIDSTLEKVGEKMDKY 172
>SB_46210| Best HMM Match : CMAS (HMM E-Value=2.6e-10)
Length = 190
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -2
Query: 283 PSERKDSVWIGGSILASLSTFQQMWI-SKEEYD 188
P KD++ I G+ L +L + ++ WI KE YD
Sbjct: 89 PHHFKDTLRIAGARLFNLQSKKRAWIVGKEHYD 121
>SB_59641| Best HMM Match : PAE (HMM E-Value=0)
Length = 1252
Score = 25.8 bits (54), Expect = 8.5
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = +2
Query: 62 ITRYNVLTVAFRTRTSTTPHSTGVTRPRCLEALAVDDAGAGLVVFLLRDPHLLEGGQGCQ 241
+ +++V T + +S H TR +C + VDDA LVV L+ +LL+ + C
Sbjct: 103 VDKFSVSTKDKYSSSSAMDHVLVETRTKCTKWPIVDDAFKALVV-LIPGSNLLK-VKVCL 160
Query: 242 DG 247
DG
Sbjct: 161 DG 162
>SB_58889| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 20 IRIDGVRLDVQFSGITRYNVLTVAFRTRTSTTPHSTGVT 136
+R DG R ++F+GI + ++ F ++ P +T T
Sbjct: 14 VRNDGTRPPIEFAGIDKLDICDYCFIEVMTSPPQATPPT 52
>SB_33309| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 646
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 86 VAFRTRTSTTPHSTGVTRPRCLEALAVDDAGAGLVVF 196
+A TS+T + T P CLE AGL VF
Sbjct: 138 IADNATTSSTQTTARATLPHCLEIKTSSIPNAGLGVF 174
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,717,451
Number of Sequences: 59808
Number of extensions: 189020
Number of successful extensions: 658
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 658
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 463065397
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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