Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0127
(700 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11507| Best HMM Match : SIR2 (HMM E-Value=3.4e-11) 91 1e-18
SB_17507| Best HMM Match : SIR2 (HMM E-Value=0.00019) 45 5e-05
SB_43176| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_42699| Best HMM Match : SIR2 (HMM E-Value=1.6e-12) 42 5e-04
SB_52117| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_39846| Best HMM Match : SIR2 (HMM E-Value=1.4013e-45) 36 0.024
SB_8770| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_29318| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_37377| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_24409| Best HMM Match : 7tm_1 (HMM E-Value=6.2e-14) 28 6.3
SB_7689| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_6203| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_11507| Best HMM Match : SIR2 (HMM E-Value=3.4e-11)
Length = 813
Score = 90.6 bits (215), Expect = 1e-18
Identities = 40/68 (58%), Positives = 52/68 (76%)
Frame = +2
Query: 305 FDSNDKLNQKCVLLAQLVKDSKHIVVHTGAGISTSAGIPDFRGPNGVWTLEKEGKKPTIN 484
FDS +L K LA++++ +K +VVHTGAG+ST+AGIPDFRGP GVWTLE++G P I+
Sbjct: 164 FDSESELASKVSHLAEMIRAAKRVVVHTGAGVSTAAGIPDFRGPKGVWTLEEKGITPKID 223
Query: 485 VSFADAQP 508
VSF A P
Sbjct: 224 VSFDSAAP 231
>SB_17507| Best HMM Match : SIR2 (HMM E-Value=0.00019)
Length = 202
Score = 45.2 bits (102), Expect = 5e-05
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +2
Query: 368 KHIVVHTGAGISTSAGIPDFRGP 436
KHI+V TGAGIST+AGIPDFR P
Sbjct: 121 KHIIVMTGAGISTAAGIPDFRSP 143
>SB_43176| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 45.2 bits (102), Expect = 5e-05
Identities = 18/35 (51%), Positives = 27/35 (77%)
Frame = +2
Query: 344 LAQLVKDSKHIVVHTGAGISTSAGIPDFRGPNGVW 448
+ +L+K K+I+V TGAG+S S GIPDFR +G++
Sbjct: 111 VVRLIKKCKNIIVLTGAGVSVSCGIPDFRSRDGIY 145
>SB_42699| Best HMM Match : SIR2 (HMM E-Value=1.6e-12)
Length = 501
Score = 41.9 bits (94), Expect = 5e-04
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Frame = +2
Query: 299 EKFDSNDKLNQKCVLLAQLVKDSKHIVVHTGAGISTSA-----GIPDFRGPNGVWTLEKE 463
E D + L K L ++++K + ++TGAGIST + F GPNG+WT +
Sbjct: 74 EVLDPEEILEDKVCQLVGAIREAKTLAIYTGAGISTVKFRLIYCLRFFSGPNGIWTRLAK 133
Query: 464 GKKPTINVSFADAQP 508
G++ + + DA+P
Sbjct: 134 GER-LGSYNLCDAEP 147
>SB_52117| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 545
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +2
Query: 368 KHIVVHTGAGISTSAGIPDFRGP 436
K+I+V GAGIST +GIPDFR P
Sbjct: 111 KNIIVMAGAGISTPSGIPDFRTP 133
>SB_39846| Best HMM Match : SIR2 (HMM E-Value=1.4013e-45)
Length = 427
Score = 36.3 bits (80), Expect = 0.024
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +2
Query: 293 VPEKFDSNDKLNQKCVLLAQLVKDSKHIVVHTGAGISTSAGIPDFR 430
VPE S +L+ L + + ++ I V TGAGIST +GI D+R
Sbjct: 140 VPEFHTSKQELSYITSRLDEFIAENPKIFVITGAGISTESGIRDYR 185
>SB_8770| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1303
Score = 31.9 bits (69), Expect = 0.51
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +2
Query: 263 SPYENKGILGVPEKFDSNDKLNQKCVLLAQLVK-DSKHIVVHTGAGISTSAGIPDFRGPN 439
+P GI VP + + KL +K + K + K ++ AG+ + PDF
Sbjct: 143 NPDRPAGIPVVPVYDEDDAKLKRKVQRITSPEKWELKQLIA---AGVLDKSDYPDFDEDT 199
Query: 440 GVWTLEKEGKKPTINVSFADAQPQ 511
G+ E +G + + AD +P+
Sbjct: 200 GILPKEDDGSDEDVEIEMADEEPE 223
>SB_29318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 148
Score = 31.9 bits (69), Expect = 0.51
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = -2
Query: 432 PLKSGIPAEVLMPAPV 385
PLKSGIPA VL PAPV
Sbjct: 2 PLKSGIPAAVLTPAPV 17
>SB_37377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/79 (20%), Positives = 34/79 (43%)
Frame = +2
Query: 281 GILGVPEKFDSNDKLNQKCVLLAQLVKDSKHIVVHTGAGISTSAGIPDFRGPNGVWTLEK 460
G +G + ++D + + + ++ + K ++ H G G G+P G + WT K
Sbjct: 90 GYIGFLTEMINSDMSHSQALQPSRTEQPRKVMICHRGFGSQNEYGLPPLTGHSLSWTDSK 149
Query: 461 EGKKPTINVSFADAQPQKP 517
+ K ++ P+ P
Sbjct: 150 KSKTVAATMTAKIWTPEDP 168
>SB_24409| Best HMM Match : 7tm_1 (HMM E-Value=6.2e-14)
Length = 439
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -3
Query: 332 SGSVCHLNQISLGLLVY-LCFHKVIVLCIIARHFWETIYLMVLTQIFIE 189
+G C + + LLVY CF K + C+ W I + IF++
Sbjct: 103 TGDFCFTTRTTCVLLVYRTCFRKASIACLTVLGLWAIIGNTISLVIFLK 151
>SB_7689| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 612
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = +2
Query: 101 YKKLNTSIIRSSLLCPYYKKISLXXXXXMVQ*KSV*VPLDKLSPKNVLQLCKGLSPY 271
+ L T++ SLL PYY SL +++ + P L+ LQ C LSPY
Sbjct: 84 FSPLTTALQACSLLSPYYDPSSLLPFLPLLRPFKL-APFSPLT--TALQACSLLSPY 137
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = +2
Query: 101 YKKLNTSIIRSSLLCPYYKKISLXXXXXMVQ*KSV*VPLDKLSPKNVLQLCKGLSPY 271
+ L T++ SLL PYY SL +++ + P L+ LQ C LSPY
Sbjct: 47 FSPLTTALQACSLLFPYYDPSSLLPFLPLLRPFKL-APFSPLT--TALQACSLLSPY 100
Score = 27.9 bits (59), Expect = 8.4
Identities = 20/66 (30%), Positives = 29/66 (43%)
Frame = +2
Query: 74 ITVAHFFLKYKKLNTSIIRSSLLCPYYKKISLXXXXXMVQ*KSV*VPLDKLSPKNVLQLC 253
+T A + L T++ SLL PYY SL +++ + P L+ LQ C
Sbjct: 370 LTTAIKLAPFSSLTTTLQACSLLLPYYDPSSLLPSLPLLRPFKL-APFSSLT--RALQTC 426
Query: 254 KGLSPY 271
L PY
Sbjct: 427 SILFPY 432
>SB_6203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 741
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 451 SPHSIWPSKVWNTRRSTYASSSVDNNMFTIFHK 353
S S S WNT + Y+S+S D+N T++ K
Sbjct: 155 SQESSVDSSHWNTSHAGYSSTSSDHNYSTLYVK 187
>SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2916
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = -3
Query: 398 CQLQCGQQYVYYLSQVEPRVHISG-SVCHLNQISLGLLVYLCFHKVIVLCIIARHFWETI 222
C + G+ Y+ V + S S N IS+ L++ C+++++ L ++ +
Sbjct: 2004 CCVHDGEMLTYFFHHVLTLLTYSNVSPSASNVISVSLVMAFCYYRILTLHVVCLAGRREL 2063
Query: 221 YLMVLT 204
Y +LT
Sbjct: 2064 YYRILT 2069
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,985,270
Number of Sequences: 59808
Number of extensions: 464322
Number of successful extensions: 1101
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1100
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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