Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0081
(766 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15549| Best HMM Match : ADH_zinc_N (HMM E-Value=9.4e-13) 36 0.027
SB_59580| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.062
SB_29610| Best HMM Match : Extensin_2 (HMM E-Value=2.3) 34 0.11
SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 32 0.44
SB_14316| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_20363| Best HMM Match : Involucrin (HMM E-Value=0.31) 31 1.3
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 31 1.3
SB_540| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_51335| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_40080| Best HMM Match : DUF1267 (HMM E-Value=2.6) 29 3.1
SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13) 29 4.1
SB_36081| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_43863| Best HMM Match : FLO_LFY (HMM E-Value=1.5) 29 5.4
SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_7844| Best HMM Match : RasGEF (HMM E-Value=0.00058) 29 5.4
SB_20679| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_20476| Best HMM Match : AT_hook (HMM E-Value=0.014) 29 5.4
SB_53103| Best HMM Match : DUF1388 (HMM E-Value=0.29) 28 7.2
SB_39593| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_43314| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05) 28 7.2
SB_12387| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_43444| Best HMM Match : WSC (HMM E-Value=0.084) 28 9.5
SB_25279| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_9343| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_52196| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_39898| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_39230| Best HMM Match : SNF2_N (HMM E-Value=1.40004e-41) 28 9.5
SB_28214| Best HMM Match : Drf_FH1 (HMM E-Value=3.8) 28 9.5
SB_20283| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
>SB_15549| Best HMM Match : ADH_zinc_N (HMM E-Value=9.4e-13)
Length = 562
Score = 36.3 bits (80), Expect = 0.027
Identities = 18/69 (26%), Positives = 28/69 (40%)
Frame = +3
Query: 105 TVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVANEVEADQKVP 284
TV ++KG + G P+S E KK+ K D++ P + E + K
Sbjct: 473 TVAKEKGASERRRRGRSPKSDEQKKKDEDSKPEEAKPEEPKEDEKSKPEETKAEEEAKPE 532
Query: 285 RKKRESRAR 311
K E A+
Sbjct: 533 APKAEEEAK 541
>SB_59580| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 999
Score = 35.1 bits (77), Expect = 0.062
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = +3
Query: 117 KKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVANEVEADQKVPRKKR 296
K+ + R KA + E KEL+KR + A + +S KS DE+ A+ + + +K++
Sbjct: 812 KEKQERLKAKKKEEEEKELEKRSKTKDAKKYFESWKSKKDEELKEAHRAKMQELKKQKQK 871
Query: 297 ESRAR 311
E +
Sbjct: 872 EEEEK 876
>SB_29610| Best HMM Match : Extensin_2 (HMM E-Value=2.3)
Length = 1353
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +3
Query: 114 EKKGRGRPKANGTQPESKELKKRGRPPAATR-TKDSAKSSDDEQAPVANEVEADQKVPRK 290
++ R R A +P K + RP A+R TK S D+Q P + P+
Sbjct: 466 KQAARPRQSARQARPRQSSRKSKARPRQASRKTKTSKPQDQDKQDPRPRQKSRKTNKPQH 525
Query: 291 KRESRAR 311
K+ SR R
Sbjct: 526 KQASRPR 532
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Frame = +3
Query: 117 KKGRGRP---KANGTQPESKELKKRGRPP--AATRTKDSAKSSDDEQAPVANEVEADQKV 281
+K + RP +SK+ K+G P A+++TK S D+QA + +
Sbjct: 421 RKSKARPTQASRKSKASKSKDQGKQGARPRQASSKTKTSKPEDQDKQAARPRQSARQARP 480
Query: 282 PRKKRESRAR 311
+ R+S+AR
Sbjct: 481 RQSSRKSKAR 490
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 150 TQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVANEVEADQKVPRKK-RESRARVK 317
++P+ ++ K+ RP A+R ++K D ++ A Q PR+ R+S+AR +
Sbjct: 571 SKPQDQD-KQAARPRQASRKTKTSKPQDQDKQAARPRQAARQARPRQSSRKSKARAR 626
>SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 903
Score = 32.7 bits (71), Expect = 0.33
Identities = 21/69 (30%), Positives = 31/69 (44%)
Frame = +3
Query: 117 KKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVANEVEADQKVPRKKR 296
KK R K + T E KE KK + T+ KDS + + A E E ++ ++R
Sbjct: 400 KKKRSHSKTSSTTDEEKERKK-----SETKNKDSEDEEKERKKREAEEEEERRREEEERR 454
Query: 297 ESRARVKVE 323
E R + E
Sbjct: 455 EEEERKREE 463
Score = 31.9 bits (69), Expect = 0.58
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = +3
Query: 90 SDDGSTVVEKKGRGRP--KANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVANEV 263
S ST E+K R + K ++ E KE KKR R ++ + ++E+ E
Sbjct: 406 SKTSSTTDEEKERKKSETKNKDSEDEEKERKKREAEEEEERRREEEERREEEERKREEEE 465
Query: 264 EADQKVPRKKRESRARVKVE 323
++ KKRE R + E
Sbjct: 466 RKQREEEEKKREEEERKQRE 485
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 32.7 bits (71), Expect = 0.33
Identities = 22/75 (29%), Positives = 32/75 (42%)
Frame = +3
Query: 99 GSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVANEVEADQK 278
G+++VEK P+A T P E K PA A +++D N E Q+
Sbjct: 420 GASLVEKVKEAEPEAMETAPVEGEKKDAPDAPAPDAPAPDANATND---ATTNNTEDQQQ 476
Query: 279 VPRKKRESRARVKVE 323
P E++A K E
Sbjct: 477 QPMDTEENKAENKEE 491
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 32.3 bits (70), Expect = 0.44
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +3
Query: 90 SDDGSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPV-ANEVE 266
SDDG +VE+K R + G P + + + +T+ K SA + ++AP +
Sbjct: 452 SDDGYYIVEEKYRNKYDL-GDPPVFSDSPSKNKESKSTKRKKSATGGEGKEAPAKKKQKH 510
Query: 267 ADQKVPRKKRE 299
D P+K ++
Sbjct: 511 NDGDAPKKSKK 521
>SB_14316| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1472
Score = 31.5 bits (68), Expect = 0.77
Identities = 19/80 (23%), Positives = 45/80 (56%)
Frame = +1
Query: 4 INSHGNSGIACCKQVLAKYLHYKLFSELCLTTVQQLLKRKDAVDQKPMEHNLSRKNLKNE 183
I + GN+G+ C+ V+ YL++ +EL + +V L + +++K ++ LK+
Sbjct: 490 IKAIGNAGLRACQHVILAYLNFDKCTELRVESVWAL---RRLINEK--NTKVTMTVLKHF 544
Query: 184 VGLQLPPEQKILLSLLMMNK 243
+ + PE ++ ++L+++K
Sbjct: 545 INVTNHPEVRMACAVLLLDK 564
>SB_20363| Best HMM Match : Involucrin (HMM E-Value=0.31)
Length = 353
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/66 (24%), Positives = 31/66 (46%)
Frame = +3
Query: 96 DGSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVANEVEADQ 275
+G E+ + RP+ NG+Q E + ++ ++ S SS DE+ E A+
Sbjct: 106 EGQEEKEQSDKKRPQTNGSQEEKGQPSEKNEEKPNIASEHSTPSSGDEKLSKQKESTAEN 165
Query: 276 KVPRKK 293
+ +K+
Sbjct: 166 EHQQKE 171
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/66 (24%), Positives = 31/66 (46%)
Frame = +3
Query: 96 DGSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVANEVEADQ 275
+G E+ + RP+ NG+Q E + ++ ++ S SS DE+ E A+
Sbjct: 384 EGQEEKEQSDKKRPQTNGSQEEKGQPSEKNEEKPNIASEHSTPSSGDEKLSKQKESTAEN 443
Query: 276 KVPRKK 293
+ +K+
Sbjct: 444 EHQQKE 449
>SB_540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 114 EKKGRGRPKANGTQPES-KELKKRGRPPAATRTKDSAKSSDDEQAPVANEVEADQKVPRK 290
+K + R ++ P+S K KKR P+A+ + DS K ++ + ++DQ+ R
Sbjct: 47 KKTKKHRKRSRSPTPDSGKSKKKRHHSPSASES-DSEKRPKGKEKSRKDADDSDQERDRS 105
Query: 291 KRESRAR 311
KR+ + R
Sbjct: 106 KRDKKDR 112
>SB_51335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 576
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +3
Query: 84 TMSDDGSTVVEKKGRGRPKANGTQPE---SKELKKRGRPPAATRTKDSAKSSDDEQAPVA 254
T+ D ++ E+ + KA+ + + +K++ +G+ + + + SSDDE+ VA
Sbjct: 168 TVKADFNSSEEEVSSQKTKASSRKDQKKMNKQMANKGKGAKSKKKTIESNSSDDEEGQVA 227
Query: 255 N-EVEADQKVPRKKRES 302
A ++ P+K ES
Sbjct: 228 ELRKGASEQFPKKSEES 244
>SB_40080| Best HMM Match : DUF1267 (HMM E-Value=2.6)
Length = 109
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +1
Query: 46 VLAKYLHYKLFSELCLTTVQQLLKRKDAVDQKPMEHNLSRKNLKNEVGLQ 195
VL + HY + L + ++L +R +D+ E+ L R+NL+ + L+
Sbjct: 14 VLCNHPHYLVNELLDIQLNEELSERNSVIDETLEENQLERENLEERMSLK 63
>SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13)
Length = 1072
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 168 ELKKRGRPPAATRTKDSAKSSDDEQAPVANEVEADQ-KVPRKKRESRARVK 317
E K + + S +D++ P A EVE+ + PR+KRE +V+
Sbjct: 718 ETKDQEEEAGLNKENKSNNLDEDQEQPTAKEVESPEVTTPRRKRERVVKVE 768
>SB_36081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 424
Score = 29.1 bits (62), Expect = 4.1
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Frame = +3
Query: 87 MSDDGSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKS-----SDDEQAPV 251
M +DG + + G G+ +A + E+ K P A + SAK SD+E+
Sbjct: 308 MIEDGQ-MRKISGSGKKQAKVDKYENTSQVKAYNPDADSTIGKSAKKRKHEKSDEEETAA 366
Query: 252 ANEVEADQKVPRKKRES-RARVKVEVVD 332
EVE+ K +K+++S + + K E D
Sbjct: 367 TPEVESPPKKHKKEKKSKKEKTKTEESD 394
>SB_43863| Best HMM Match : FLO_LFY (HMM E-Value=1.5)
Length = 592
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/64 (26%), Positives = 27/64 (42%)
Frame = +3
Query: 108 VVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVANEVEADQKVPR 287
VV+ G P A S+ KRG T++KD K S ++ E + D+
Sbjct: 364 VVKTTGSTTPIAKADTTGSESEGKRGESVGKTKSKDKDKESREKDKEKKEERDLDKNSSE 423
Query: 288 KKRE 299
+K +
Sbjct: 424 RKEK 427
>SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +3
Query: 105 TVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVANEVEADQKVP 284
T EKK R +G++ E K+ KK+ R + R S+ +E+ P N+ + +K P
Sbjct: 483 TEQEKKARDSSHDSGSEYERKKKKKKNRSESQERA-----SASEEETPNKNKKRSYKKKP 537
>SB_7844| Best HMM Match : RasGEF (HMM E-Value=0.00058)
Length = 1299
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Frame = +3
Query: 96 DGSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDD--EQAPVANEVE 266
DG+T V G +GT P E + G T ++ + S + + APV NE E
Sbjct: 256 DGTTPVPNDQEGSGNTDGTAPVQNEQEGSGDTDGTTPVQNDQEVSGNTYDTAPVQNEQE 314
>SB_20679| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/59 (30%), Positives = 23/59 (38%)
Frame = +3
Query: 141 ANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVANEVEADQKVPRKKRESRARVK 317
A G +P S PP+ + S D QAP A + P KRES +K
Sbjct: 6 AMGKEPPSPTAAMGKGPPSPIAAMEGP--SRDSQAPYAKSCRVSESRPAGKRESAPHIK 62
>SB_20476| Best HMM Match : AT_hook (HMM E-Value=0.014)
Length = 475
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/64 (23%), Positives = 27/64 (42%)
Frame = +3
Query: 120 KGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVANEVEADQKVPRKKRE 299
+GRGR + G + RGR + + + + SDD+ + E + PR
Sbjct: 355 RGRGRGRGRGRGSSRGRGRGRGRGRGRAKRRKTKEYSDDDSEEEFEDEEDESYSPRANLR 414
Query: 300 SRAR 311
++R
Sbjct: 415 KKSR 418
>SB_53103| Best HMM Match : DUF1388 (HMM E-Value=0.29)
Length = 462
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 4/72 (5%)
Frame = +3
Query: 114 EKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVANEVEADQKVP--- 284
EKK R + PE + +K + T+ + E+ N + +QK P
Sbjct: 205 EKKKNSRRRQEQKTPEEGKNRKHQKKARTKNTRRGQEQKTPEEGKNKNHQKQEQKTPEEG 264
Query: 285 -RKKRESRARVK 317
K + RAR++
Sbjct: 265 KNKNHQKRARIE 276
>SB_39593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +3
Query: 90 SDDGSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQ 242
+DD E+ G P + +P+ K LKK + ++D AK + ++
Sbjct: 58 ADDSDEESEEDGEWDPSKDNPKPQKKALKKGTKRKRKAHSQDGAKEVNGKE 108
>SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1769
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/35 (37%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Frame = -2
Query: 534 FNFETINENKSLFSQ--YTY*IITENNYTKIF-RP 439
FN+E+IN N+S S+ Y Y +++ ++ K++ RP
Sbjct: 90 FNYESINNNRSRLSKKAYDYKVVSAIDFAKLYLRP 124
>SB_43314| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 326
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +2
Query: 542 VNSHVSSNLLNYRDSTTFSIEIISPKYSCKKGLF*EMI 655
+NS + + LN++ ST E++ K S G F + I
Sbjct: 191 INSEIRTTFLNFKPSTIADFELLREKLSLLNGTFHQYI 228
>SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05)
Length = 2293
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +3
Query: 84 TMSDDGSTVVEK-KGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVANE 260
T S +T++ K K G+ + P + + A K KSS D+Q+P N
Sbjct: 823 TTSQTQTTILRKPKTDGKKDEDKQSPRQESRTDNSQQAAKGHLKVEIKSSKDQQSP-GNL 881
Query: 261 VEADQKVPRKKRESRARVKVEVVD 332
E + ++ S+ + E+VD
Sbjct: 882 KEGYKSEKKQNDNSKNSMHPEIVD 905
>SB_12387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1096
Score = 28.3 bits (60), Expect = 7.2
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
Frame = +3
Query: 102 STVVEKKGRGRPKANGTQPESKELKKR----GRPPAATRTKDSAK-SSDDEQA--PVANE 260
S + K RGR + G PE K+ +K R R K+ K SD E A V E
Sbjct: 384 SPATQSKSRGRGRGRGGNPEMKKSRKSAADFARDRELARKKEQEKHGSDFEDADEEVIVE 443
Query: 261 VEADQKVPRKKRES 302
E +++ R K E+
Sbjct: 444 EENEKESERIKEEN 457
>SB_43444| Best HMM Match : WSC (HMM E-Value=0.084)
Length = 155
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -3
Query: 278 LLVCLYLVSYWCLFIIRRLSRIFCSGGSWRPTSFFK 171
LL+CL+ V+ C ++ ++ CSGG T+ FK
Sbjct: 3 LLLCLFGVALMCFDTVKGITLGVCSGGGPCETADFK 38
>SB_25279| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 150 TQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVANEVEADQKVPRKK-RESRARVK 317
++P+ ++ K+ RP A+R ++K D ++ A Q PR+ R+S+AR +
Sbjct: 35 SKPQDQD-KQAARPRQASRKTKTSKPQDQDKQAARPRQAARQARPRQSSRKSKARAR 90
>SB_9343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +3
Query: 156 PESKELKKRGRPPAATRTKDSAKSSDDEQAPVANEVEADQ 275
PE + PPA + + S DE+ V+N+ EA++
Sbjct: 423 PEETIIAPPSPPPAQPEVEPEQQESSDEETSVSNDSEAER 462
>SB_52196| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 180 RGRPPAATRTKDSAKSSDDEQAPVANEVEADQKVP 284
+GR P R ++ AK S ++ P + E Q+VP
Sbjct: 210 KGRGPRCNRHQEKAKESTEQPQPGTSAEEQGQEVP 244
>SB_39898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 27.9 bits (59), Expect = 9.5
Identities = 21/66 (31%), Positives = 28/66 (42%)
Frame = -1
Query: 313 TLALDSRFFLGTFWSASTSLATGACSSSEDLAESFVLVAAGGRPRFLSSFDSGCVPLAFG 134
++ LD +FLG F TS +G SSS + S GG + G + L
Sbjct: 61 SVTLDDNYFLGFFAIGITSTTSGISSSSTSSSSSPTSSLEGGTGTLTFTQVVGSL-LPLP 119
Query: 133 LPRPFF 116
LP FF
Sbjct: 120 LPLTFF 125
>SB_39230| Best HMM Match : SNF2_N (HMM E-Value=1.40004e-41)
Length = 1682
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +3
Query: 153 QPESKELKKRGRPPAATRTKDSAKSSDDEQAPVANEVEADQKVPRKKRESRAR 311
+ ES+E + +R K+ SS++EQ+ D+ +P K+ AR
Sbjct: 1044 ESESEEDTDANKGRGKSRRKEFDTSSEEEQSDEDESSSGDEVIPEKRASGTAR 1096
>SB_28214| Best HMM Match : Drf_FH1 (HMM E-Value=3.8)
Length = 361
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +3
Query: 132 RPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQA 245
RP + T+P + K P A RT+++A+ +++ A
Sbjct: 33 RPTSTSTKPTTASTKPTSPPSQAARTRNTAEKPEEKPA 70
>SB_20283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = -1
Query: 301 DSRFFLGTFWSASTSLATGACSSSEDLAESFVLVAAGGRPRFLSSFDSGCVPLAFGLPRP 122
DS G +AS +L A + + A S GG+P +FD+ AFG P P
Sbjct: 651 DSTSAFGVSQTASNNLFGAASAQNTFGASSLKQNTFGGQPTSQGAFDTSTNLGAFGAPTP 710
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,889,145
Number of Sequences: 59808
Number of extensions: 370867
Number of successful extensions: 1403
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1394
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2072022557
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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