Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0057
         (640 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_9412| Best HMM Match : Peptidase_M1 (HMM E-Value=3.1e-07)           33   0.26 
SB_33597| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.2  
SB_1934| Best HMM Match : CHB_HEX_C (HMM E-Value=8.5)                  29   4.2  
SB_5196| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   5.6  
SB_44983| Best HMM Match : Death (HMM E-Value=4.8e-09)                 28   7.4  
SB_41635| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.7  

>SB_9412| Best HMM Match : Peptidase_M1 (HMM E-Value=3.1e-07)
          Length = 1844

 Score = 32.7 bits (71), Expect = 0.26
 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
 Frame = +1

Query: 157  IPFHSVSNPL*HVFLQTRPTKSTQR*KAAXSAP--ALLTSINDSRLPVRAIKVKKDLWDK 330
            +P  +   P  + F++ RP +S QR ++  +     +       R P    KV       
Sbjct: 923  LPLGARKTPFSNQFVKHRPEESKQRIRSPNNLDDSGIQVESPGKRTPFEGTKVSTKASTS 982

Query: 331  KSIVGGIVLAMQTTSLLPIQG 393
            K+I GGIV   + +++LP +G
Sbjct: 983  KTISGGIVKVSEPSNVLPPKG 1003


>SB_33597| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 609

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 243 VXCPGIAHIHKRFSFACKGNKSKKRFMG*KIYC 341
           V CP I H HK F F C  +  KK+  G +++C
Sbjct: 540 VQCPSIMH-HK-FCFPCSRDSIKKQGAGTEVFC 570


>SB_1934| Best HMM Match : CHB_HEX_C (HMM E-Value=8.5)
          Length = 280

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -1

Query: 202 EERHVIADWKHCGRECIPKLDGTWQKRSH 116
           E+ H +AD        +  +DGTWQKR H
Sbjct: 122 EKMHTLADGTRVADVAV-SVDGTWQKRGH 149


>SB_5196| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 412

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +3

Query: 63  NRAPPYYLEPLRYPQCFQ*DLFCHVPSSF-GMHSLPQCFQS 182
           N +P Y+   L+ PQCF+  L   +P  F G+  LPQ F++
Sbjct: 366 NSSPQYFEACLQLPQCFEACL--QLPIVFRGLPQLPQYFEA 404


>SB_44983| Best HMM Match : Death (HMM E-Value=4.8e-09)
          Length = 868

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +1

Query: 196 FLQTRPTKSTQR*KAAXSAPALLTSINDSRLPVRAI 303
           FL     +S Q   A    P + T  ND R+PV A+
Sbjct: 377 FLHEEHARSAQETNAGKDLPCMTTLRNDKRIPVSAL 412


>SB_41635| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 128

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 21/75 (28%), Positives = 35/75 (46%)
 Frame = +1

Query: 112 FSEIFSAMYRPVLECIPFHSVSNPL*HVFLQTRPTKSTQR*KAAXSAPALLTSINDSRLP 291
           F +I    Y+P+  CIPF S   P   + L T P   T   K   +   + T +  S++ 
Sbjct: 57  FLDIIDPYYQPLKPCIPFTSSCYP---IHLSTHP--QTHLSKRPLNV-FIFTPLKKSQVD 110

Query: 292 VRAIKVKKDLWDKKS 336
           +  I+    L++K+S
Sbjct: 111 LTWIRTPAVLFEKRS 125


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,005,924
Number of Sequences: 59808
Number of extensions: 330419
Number of successful extensions: 792
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)