Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0095
(491 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 283 5e-77
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 283 5e-77
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 282 1e-76
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 281 2e-76
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 278 2e-75
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 273 6e-74
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 269 1e-72
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 229 7e-61
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 195 1e-50
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 162 1e-40
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 143 6e-35
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 128 2e-30
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 126 7e-30
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 125 2e-29
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 120 7e-28
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 117 5e-27
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 1e-26
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 111 4e-25
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 4e-20
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 91 3e-19
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 85 3e-17
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 9e-16
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 74 7e-14
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 44 5e-05
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 44 9e-05
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 32 0.30
SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26) 29 1.6
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_45701| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_34277| Best HMM Match : DUF321 (HMM E-Value=0.028) 29 2.8
SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 28 3.6
SB_13469| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06) 27 8.4
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 283 bits (694), Expect = 5e-77
Identities = 128/141 (90%), Positives = 134/141 (95%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNLVLD 428
HVPRAVFVDLEPTVVDEVRTGTYRQLFHP QL+TGKEDAANNYARGHYT+GKEI++LVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLD 120
Query: 429 IIHKLTYQCTILQRFLIFHSF 491
I KL QCT LQ FLIFHSF
Sbjct: 121 RIRKLADQCTGLQGFLIFHSF 141
Score = 281 bits (690), Expect = 2e-76
Identities = 128/140 (91%), Positives = 133/140 (95%)
Frame = +3
Query: 72 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 251
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 252 VPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNLVLDI 431
VPRAVFVDLEPTVVDEVRTGTYRQLFHP QLITGKEDAANNYARGHYT+GKEI++LVLD
Sbjct: 495 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDR 554
Query: 432 IHKLTYQCTILQRFLIFHSF 491
I KL QCT LQ FLIFHSF
Sbjct: 555 IRKLADQCTGLQGFLIFHSF 574
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 283 bits (694), Expect = 5e-77
Identities = 131/143 (91%), Positives = 134/143 (93%)
Frame = +3
Query: 63 IKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGA 242
I RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 63 ILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 122
Query: 243 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNLV 422
GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHP QLITGKEDAANNYARGHYTIGKEI++LV
Sbjct: 123 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 182
Query: 423 LDIIHKLTYQCTILQRFLIFHSF 491
LD I KL QCT LQ FLIFHSF
Sbjct: 183 LDRIRKLADQCTGLQGFLIFHSF 205
Score = 281 bits (690), Expect = 2e-76
Identities = 127/141 (90%), Positives = 134/141 (95%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
+RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNLVLD 428
HVPRAVFVDLEPTVVDEVRTGTYRQLFHP QLITGKEDAANNYARGHYT+GKE+++LVLD
Sbjct: 646 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLD 705
Query: 429 IIHKLTYQCTILQRFLIFHSF 491
I KL QCT LQ FLIFHSF
Sbjct: 706 RIRKLADQCTGLQGFLIFHSF 726
Score = 163 bits (397), Expect = 5e-41
Identities = 71/73 (97%), Positives = 73/73 (100%)
Frame = +3
Query: 72 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 251
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 252 VPRAVFVDLEPTV 290
VPRAVFVDLEPTV
Sbjct: 574 VPRAVFVDLEPTV 586
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 282 bits (691), Expect = 1e-76
Identities = 128/140 (91%), Positives = 133/140 (95%)
Frame = +3
Query: 72 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 251
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 252 VPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNLVLDI 431
VPRAVFVDLEPTVVDEVRTGTYRQLFHP QLITGKEDAANNYARGHYT+GKEI++LVLD
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDR 120
Query: 432 IHKLTYQCTILQRFLIFHSF 491
I KL QCT LQ FLIFHSF
Sbjct: 121 IRKLADQCTGLQGFLIFHSF 140
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 281 bits (689), Expect = 2e-76
Identities = 128/141 (90%), Positives = 133/141 (94%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNLVLD 428
HVPRAVFVDLEPTVVDEVRTGTYRQLFHP QLITGKEDAANNYARGHYTIGKEI++LVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 429 IIHKLTYQCTILQRFLIFHSF 491
KL QCT LQ FLIFHSF
Sbjct: 121 RCRKLADQCTGLQGFLIFHSF 141
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 278 bits (682), Expect = 2e-75
Identities = 126/140 (90%), Positives = 132/140 (94%)
Frame = +3
Query: 72 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 251
RECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 252 VPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNLVLDI 431
VPRAVF DLEPTVVDEVRTGTYRQLFHP QLITGKEDAANNYARGHYT+GKE+++LVLD
Sbjct: 866 VPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDR 925
Query: 432 IHKLTYQCTILQRFLIFHSF 491
I KL QCT LQ FLIFHSF
Sbjct: 926 IRKLADQCTGLQGFLIFHSF 945
Score = 272 bits (666), Expect = 1e-73
Identities = 121/140 (86%), Positives = 131/140 (93%)
Frame = +3
Query: 72 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 251
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDD+FNTFF+ETGAGKH
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 252 VPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNLVLDI 431
VPRAVFVDLEPTV+DEVRTGTYRQLFHP QLITGKEDAANNYARGHYT+GKE +++VLD
Sbjct: 433 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDR 492
Query: 432 IHKLTYQCTILQRFLIFHSF 491
+ KL CT LQ FLIFHSF
Sbjct: 493 LRKLADGCTGLQGFLIFHSF 512
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 273 bits (669), Expect = 6e-74
Identities = 123/141 (87%), Positives = 131/141 (92%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG+GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNLVLD 428
HVPRAVF DLEPTVVDEVRTGTYRQLFHP QLITGKEDAANNYARGHYT+GKE+++ VLD
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLD 120
Query: 429 IIHKLTYQCTILQRFLIFHSF 491
+ KL CT LQ FLIFHSF
Sbjct: 121 RLRKLADGCTGLQGFLIFHSF 141
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 269 bits (659), Expect = 1e-72
Identities = 118/140 (84%), Positives = 131/140 (93%)
Frame = +3
Query: 72 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 251
REC+S+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 252 VPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNLVLDI 431
VPRAVFVDLEP+V+DE+RTGTYRQLFHP QLITGKEDAANNYARGHYT+GK+ ++ VLD
Sbjct: 480 VPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDR 539
Query: 432 IHKLTYQCTILQRFLIFHSF 491
I KL QC+ LQ FL+FHSF
Sbjct: 540 IRKLADQCSGLQGFLVFHSF 559
Score = 246 bits (601), Expect = 1e-65
Identities = 109/126 (86%), Positives = 117/126 (92%)
Frame = +3
Query: 114 IGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVV 293
+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKHVPRAVF DLEPTVV
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 294 DEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNLVLDIIHKLTYQCTILQRF 473
DEVRTGTYRQLFHP QLITGKEDAANNYARGHYT+GK+++ +VLD + KL QCT LQ F
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQCTGLQGF 120
Query: 474 LIFHSF 491
LIFHSF
Sbjct: 121 LIFHSF 126
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 229 bits (561), Expect = 7e-61
Identities = 110/141 (78%), Positives = 117/141 (82%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKT GGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNLVLD 428
HVPRAVFVDLEPTVV P QLITGKEDAANNYARGHYTIGK+ ++ VLD
Sbjct: 61 HVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQVLD 110
Query: 429 IIHKLTYQCTILQRFLIFHSF 491
+ KL QC+ LQ F IFHSF
Sbjct: 111 RLRKLADQCSGLQGFFIFHSF 131
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 195 bits (476), Expect = 1e-50
Identities = 88/106 (83%), Positives = 97/106 (91%)
Frame = +3
Query: 174 MPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITG 353
MP+DKTIGGGDDSFNTFF+ETGAGKHVPRAVFVDLEPTV+DE+RTGTYRQLFHP QL++G
Sbjct: 1 MPSDKTIGGGDDSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSG 60
Query: 354 KEDAANNYARGHYTIGKEILNLVLDIIHKLTYQCTILQRFLIFHSF 491
KEDAANNYARGHYT+GKE ++L LD I KL QCT LQ FLIFHSF
Sbjct: 61 KEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLIFHSF 106
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 162 bits (394), Expect = 1e-40
Identities = 71/79 (89%), Positives = 75/79 (94%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTI GGDDSFNTFFSETG GK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 249 HVPRAVFVDLEPTVVDEVR 305
HVPRAVFVDLEP+VV ++
Sbjct: 61 HVPRAVFVDLEPSVVGRMK 79
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 143 bits (347), Expect = 6e-35
Identities = 65/88 (73%), Positives = 76/88 (86%)
Frame = +3
Query: 228 SETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKE 407
SE AGK+VPRAV VDLEPTV+DEVRTG YR L+HP Q+I+GKEDAANNYARGHYTIGKE
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Query: 408 ILNLVLDIIHKLTYQCTILQRFLIFHSF 491
++ +V+D I K+T QC+ LQ FLIFHSF
Sbjct: 1025 MVEVVMDKIRKMTDQCSGLQGFLIFHSF 1052
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 128 bits (310), Expect = 2e-30
Identities = 62/145 (42%), Positives = 84/145 (57%)
Frame = +3
Query: 54 KTQIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 233
K KMRE + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 209 KLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNE 266
Query: 234 TGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEIL 413
GK+VPRAV VDLEP +D VR+G + Q+F P + G+ A NN+A+GHYT G E++
Sbjct: 267 ATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELV 326
Query: 414 NLVLDIIHKLTYQCTILQRFLIFHS 488
+ VLD++ K C LQ F + HS
Sbjct: 327 DSVLDVVRKEAESCDCLQGFQLTHS 351
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 126 bits (305), Expect = 7e-30
Identities = 58/140 (41%), Positives = 84/140 (60%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE +S+ GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 58
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNLVLD 428
+VPR+V +DLEP +D VR+G + Q+F P + G+ A NN+A+GHYT G E+++ VLD
Sbjct: 59 YVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLD 118
Query: 429 IIHKLTYQCTILQRFLIFHS 488
++ K C +Q F + HS
Sbjct: 119 VVRKEAESCDCIQGFQLTHS 138
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 125 bits (302), Expect = 2e-29
Identities = 59/140 (42%), Positives = 82/140 (58%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 58
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNLVLD 428
+VPRA+ VDLEP +D VR+G + Q+F P + G+ A NN+A+GHYT G E+++ VLD
Sbjct: 59 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 118
Query: 429 IIHKLTYQCTILQRFLIFHS 488
++ K C LQ F + HS
Sbjct: 119 VVRKEAESCDCLQGFQLTHS 138
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 120 bits (289), Expect = 7e-28
Identities = 55/68 (80%), Positives = 60/68 (88%)
Frame = +3
Query: 288 VVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNLVLDIIHKLTYQCTILQ 467
+ DEVRTGTYRQLFHP QLITGKEDAANNYARGHYT+GKE+++LVLD I KL QCT LQ
Sbjct: 11 LADEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQ 70
Query: 468 RFLIFHSF 491
FLIFHSF
Sbjct: 71 GFLIFHSF 78
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 117 bits (282), Expect = 5e-27
Identities = 54/65 (83%), Positives = 58/65 (89%)
Frame = +3
Query: 297 EVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNLVLDIIHKLTYQCTILQRFL 476
EVRTGTYRQLFHP QLITGKEDAANNYARGHYT+GKE+++LVLD I KL QCT LQ FL
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFL 61
Query: 477 IFHSF 491
IFHSF
Sbjct: 62 IFHSF 66
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 116 bits (279), Expect = 1e-26
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MREC+S+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D++ DDSF+TFFSET +GK
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFSTFFSETASGK 255
Query: 249 H 251
H
Sbjct: 256 H 256
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3
Query: 450 QCTILQRFLIFHSF 491
QCT LQ FL+FHSF
Sbjct: 259 QCTGLQGFLVFHSF 272
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 111 bits (266), Expect = 4e-25
Identities = 50/65 (76%), Positives = 56/65 (86%)
Frame = +3
Query: 297 EVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNLVLDIIHKLTYQCTILQRFL 476
E+RTGTYRQLFHP QL++GKEDAANNYARGHYT+GKE ++L LD I KL QCT LQ FL
Sbjct: 2 EIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFL 61
Query: 477 IFHSF 491
IFHSF
Sbjct: 62 IFHSF 66
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 94.7 bits (225), Expect = 4e-20
Identities = 42/49 (85%), Positives = 46/49 (93%)
Frame = +3
Query: 297 EVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNLVLDIIHKL 443
EVRTGTYRQLFHP QLITGKEDAANNYARGHYT+GKE+++LVLD I KL
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKL 50
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 91.5 bits (217), Expect = 3e-19
Identities = 39/82 (47%), Positives = 55/82 (67%)
Frame = +3
Query: 243 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNLV 422
GK+VPRAV VDLEP +D VR+G + Q+F P + G+ A NN+A+GHYT G E+++ V
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 423 LDIIHKLTYQCTILQRFLIFHS 488
LD++ K C +Q F + HS
Sbjct: 62 LDVVRKEAESCDCIQGFQLTHS 83
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 85.0 bits (201), Expect = 3e-17
Identities = 38/49 (77%), Positives = 42/49 (85%)
Frame = +3
Query: 297 EVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNLVLDIIHKL 443
EVR GTYR LFHP QLITGKEDAANNYARGHYT+GKE ++L L+ I KL
Sbjct: 2 EVRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRKL 50
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 80.2 bits (189), Expect = 9e-16
Identities = 38/93 (40%), Positives = 52/93 (55%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 58
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLI 347
+VPRA+ VDLEP +D VR+G + Q+F P +
Sbjct: 59 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFV 91
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 73.7 bits (173), Expect = 7e-14
Identities = 29/75 (38%), Positives = 47/75 (62%)
Frame = +3
Query: 243 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNLV 422
G++VPR++ VDLEP +D VR G +F P + + AANN+A+GHY+ G E+++ +
Sbjct: 13 GRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNI 72
Query: 423 LDIIHKLTYQCTILQ 467
D++ K C +Q
Sbjct: 73 FDVLRKEAENCDCMQ 87
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 44.4 bits (100), Expect = 5e-05
Identities = 20/45 (44%), Positives = 28/45 (62%)
Frame = +3
Query: 354 KEDAANNYARGHYTIGKEILNLVLDIIHKLTYQCTILQRFLIFHS 488
+ AANN+A+G YT G E+++ +D I KL C +Q F I HS
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHS 46
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 43.6 bits (98), Expect = 9e-05
Identities = 35/142 (24%), Positives = 67/142 (47%), Gaps = 10/142 (7%)
Frame = +3
Query: 81 ISVHVGQAGVQIGNACWELYCLEHGIQPDG-----QMPTDKTIGGGDDSFNTFFSETGAG 245
+++ +GQ G QIG ++L +E + + ++ T ++S FF+
Sbjct: 4 VTLQLGQCGNQIGRELFDLI-VEDATKLNSRFLCKELTTRSCTEYEEESLARFFTRENDD 62
Query: 246 KHVPRAVFVDLEPTVVDEV-----RTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEI 410
RAV +D+E V+ + ++GT+R + Q + K + NN+A G G +
Sbjct: 63 ILNARAVSIDMESKVISQTLSEASKSGTWR--YPKGQQFSQKRGSGNNWAHGFSEHGPKS 120
Query: 411 LNLVLDIIHKLTYQCTILQRFL 476
++ VLD++ + +C L FL
Sbjct: 121 IDKVLDLVQREVEKCDRLDGFL 142
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 31.9 bits (69), Expect = 0.30
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 258 RAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNY 377
RAV +D+E VV+ + G +F QLIT NN+
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26)
Length = 904
Score = 29.5 bits (63), Expect = 1.6
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +3
Query: 72 RECISVHVGQAGVQIGNACWELYCLEHGIQPDG-QMPTDKT-IGGGDDSFNTFFSETGAG 245
+ C S + +GV+ G W L + GIQP P+D + D +NT +
Sbjct: 237 KPCASKKILASGVRYGKLTWTLGAMTSGIQPSTVSAPSDDSDCNVLCDQYNTVLNHF-IE 295
Query: 246 KHVP-RAVFVDLEP 284
KH P R V L P
Sbjct: 296 KHAPVRTFSVTLRP 309
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3
Query: 129 WELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 233
WE+ EHGI PDGQ T D N +F E
Sbjct: 2 WEVIAEEHGIDPDGQC-TAVQSKIQTDRLNVYFDE 35
>SB_45701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 326
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -3
Query: 204 LHPRWSCLWASGHQAGCRAPGSKAPSRHYRSGLRLGQ 94
LH ++S L+ G +G ++PG AP RH R+ RL Q
Sbjct: 32 LHFQYSGLYG-GVDSGKQSPGVMAPPRHSRNRNRLSQ 67
>SB_34277| Best HMM Match : DUF321 (HMM E-Value=0.028)
Length = 302
Score = 28.7 bits (61), Expect = 2.8
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +2
Query: 299 GPHWHIQTVVSSXTTYYW*GRCGQQLCPWSLHHWKGN 409
G HW+ T + +W G G + W HW GN
Sbjct: 48 GKHWYGNTGTKTLIWKHWYGNTGTKTLIWK--HWYGN 82
Score = 27.1 bits (57), Expect = 8.4
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = +2
Query: 305 HWHIQTVVSSXTTYYW*GRCGQQLCPWSLHHWKGN 409
HW T + + +W G G + W HW GN
Sbjct: 176 HWDENTGMETLVRKHWYGNTGTKTLIWK--HWYGN 208
Score = 27.1 bits (57), Expect = 8.4
Identities = 11/37 (29%), Positives = 16/37 (43%)
Frame = +2
Query: 299 GPHWHIQTVVSSXTTYYW*GRCGQQLCPWSLHHWKGN 409
G HW+ T + + +W G G + W HW N
Sbjct: 258 GKHWYGNTGMETLGQKHWYGNTGMKTLVWK--HWDKN 292
>SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 28.7 bits (61), Expect = 2.8
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 150 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAV 266
+GI+PDGQ D+ +NT F G P A+
Sbjct: 708 NGIRPDGQGLVDEGFKTASGIYNTCFERLGMNFQTPEAI 746
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 28.3 bits (60), Expect = 3.6
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3
Query: 450 QCTILQRFLIFHSF 491
QCT LQ FLIFHSF
Sbjct: 3 QCTGLQGFLIFHSF 16
>SB_13469| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2429
Score = 27.9 bits (59), Expect = 4.8
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -1
Query: 311 ASADLINNSRFKID-EDSTGYVLASSGLAEESVERIVSTP 195
ASAD + + ID +D++G L SGL EE +E IV P
Sbjct: 1043 ASADKVKSPVLSIDLKDTSGQKLEISGLKEE-IELIVEGP 1081
>SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06)
Length = 1223
Score = 27.1 bits (57), Expect = 8.4
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = -2
Query: 259 RGTCLPAPVSLKKV-LKESSPPPMVLSVGI 173
RGTCLP+ L++V LK+ + LSVG+
Sbjct: 759 RGTCLPSRDMLRRVLLKKGAREQGTLSVGV 788
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,369,169
Number of Sequences: 59808
Number of extensions: 361488
Number of successful extensions: 975
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1050596726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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