Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0081
(614 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15809| Best HMM Match : zf-C2H2 (HMM E-Value=0) 33 0.18
SB_4344| Best HMM Match : zf-C2H2 (HMM E-Value=0) 32 0.42
SB_17384| Best HMM Match : zf-C2H2 (HMM E-Value=0) 31 0.56
SB_6589| Best HMM Match : zf-C2H2 (HMM E-Value=1.2e-36) 31 0.98
SB_44730| Best HMM Match : zf-C2H2 (HMM E-Value=0) 31 0.98
SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0) 30 1.7
SB_12745| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_52475| Best HMM Match : Herpes_teg_N (HMM E-Value=2.3) 29 3.0
SB_45123| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 3.0
SB_37978| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 3.0
SB_19065| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 3.0
SB_16501| Best HMM Match : Fork_head (HMM E-Value=3.3e-29) 29 3.0
SB_27848| Best HMM Match : zf-C2H2 (HMM E-Value=1.49995e-41) 29 4.0
SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_12468| Best HMM Match : zf-C2H2 (HMM E-Value=9.8e-30) 29 4.0
SB_52826| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_37102| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 5.2
SB_8254| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 5.2
SB_2510| Best HMM Match : zf-C2H2 (HMM E-Value=6.1e-15) 28 5.2
SB_49284| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 6.9
SB_34889| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 6.9
SB_17982| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_6551| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 6.9
SB_53412| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_56992| Best HMM Match : Copper-bind (HMM E-Value=0.82) 27 9.1
SB_48551| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_24575| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_22443| Best HMM Match : Prosystemin (HMM E-Value=6.7) 27 9.1
SB_21384| Best HMM Match : 7tm_1 (HMM E-Value=8.6e-05) 27 9.1
SB_38222| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_22835| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 9.1
SB_9370| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_6634| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
>SB_15809| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 935
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 533 QCPVCDEEFHNNITLMTHIYSHVVEP 610
+C +CDEEFH+ LMTHI + P
Sbjct: 59 KCSICDEEFHDWNALMTHIRNQKNNP 84
>SB_4344| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1080
Score = 31.9 bits (69), Expect = 0.42
Identities = 21/69 (30%), Positives = 32/69 (46%)
Frame = +2
Query: 401 DDLDDIPLKNIKKEIQPEETVSMEKYYFGKLGSDEPGPRVAIAVQCPVCDEEFHNNITLM 580
D+ D K ++ + ++YY+ + DEP +QC VC EEF + L
Sbjct: 644 DEKKDDAKKQEDEDAEEGADDGYDEYYYDE---DEP-------LQCEVCKEEFTSETKLR 693
Query: 581 THIYSHVVE 607
H+ SH VE
Sbjct: 694 KHLSSHKVE 702
Score = 29.1 bits (62), Expect = 3.0
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 536 CPVCDEEFHNNITLMTHIYSHVVEPP 613
CP+C+ F L TH+ +H E P
Sbjct: 848 CPLCERAFAKGYNLKTHMRTHTGEKP 873
>SB_17384| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 425
Score = 31.5 bits (68), Expect = 0.56
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 533 QCPVCDEEFHNNITLMTHIYSHVVEPP 613
+CP+C EF TL HI +H + P
Sbjct: 318 KCPICGREFAQTTTLSNHIRTHTGQKP 344
>SB_6589| Best HMM Match : zf-C2H2 (HMM E-Value=1.2e-36)
Length = 651
Score = 30.7 bits (66), Expect = 0.98
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 533 QCPVCDEEFHNNITLMTHIYSHVVEPP 613
+CP CD+ F+ L HI+ H + P
Sbjct: 582 KCPYCDKGFNQKSNLQAHIFGHTGQRP 608
>SB_44730| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1346
Score = 30.7 bits (66), Expect = 0.98
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 533 QCPVCDEEFHNNITLMTHIYSHVVEPP 613
+C +CD+ F + L HIY+H E P
Sbjct: 1086 KCSMCDKAFRHPFGLQQHIYTHTGERP 1112
Score = 30.7 bits (66), Expect = 0.98
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 536 CPVCDEEFHNNITLMTHIYSHVVEPP 613
C CD+ F I+L TH Y H E P
Sbjct: 1143 CKHCDKSFATTISLKTHTYIHTGEKP 1168
>SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1498
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 536 CPVCDEEFHNNITLMTHIYSHVVEPP 613
C VCD+EF + L+ H H+ E P
Sbjct: 509 CSVCDKEFRSKTALINHQVKHLDERP 534
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 536 CPVCDEEFHNNITLMTHIYSHVVEPP 613
CP CD F N L H SH E P
Sbjct: 452 CPTCDRVFQTNANLERHQASHSEERP 477
>SB_12745| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 501
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 536 CPVCDEEFHNNITLMTHIYSHVVEPP 613
C VCD+EF + L+ H H+ E P
Sbjct: 441 CSVCDKEFRSKTALINHQVKHLDERP 466
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 536 CPVCDEEFHNNITLMTHIYSHVVEPP 613
CP CD F N L H SH E P
Sbjct: 384 CPTCDRVFQTNANLERHQASHSEERP 409
>SB_52475| Best HMM Match : Herpes_teg_N (HMM E-Value=2.3)
Length = 177
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 365 RRSRKQPKTYVDDDLDDIPLKNIKKEIQPEETVSMEK 475
R S K P + +D+DDI L K+ Q +E + + K
Sbjct: 25 RASSKSPLLWTPEDMDDIILTGDKRHRQTQEKMGLSK 61
>SB_45123| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 336
Score = 29.1 bits (62), Expect = 3.0
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 533 QCPVCDEEFHNNITLMTHIYSHVVE 607
+C VC++ F+ + TL TH+ +H E
Sbjct: 225 KCEVCNKSFNRSSTLKTHVRTHSEE 249
>SB_37978| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 487
Score = 29.1 bits (62), Expect = 3.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 533 QCPVCDEEFHNNITLMTHIYSH 598
+CP CD+ F N TL H+ H
Sbjct: 292 KCPTCDKAFIRNYTLQCHMLIH 313
>SB_19065| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 531
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 533 QCPVCDEEFHNNITLMTHIYSHVVEPP 613
+C +CD+EF + IT H H E P
Sbjct: 165 KCDICDKEFISAITFKRHAIVHTGEKP 191
>SB_16501| Best HMM Match : Fork_head (HMM E-Value=3.3e-29)
Length = 594
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -1
Query: 608 APPRGYRCGSS-GLCCCGTPRHRPGIVLQWPP 516
A G++ G+S CCC H PGIV Q P
Sbjct: 36 AHTNGHKGGTSKSPCCCSHENHLPGIVYQHIP 67
>SB_27848| Best HMM Match : zf-C2H2 (HMM E-Value=1.49995e-41)
Length = 257
Score = 28.7 bits (61), Expect = 4.0
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +2
Query: 533 QCPVCDEEFHNNITLMTHIYSHVVEPP 613
+C C ++FH + H Y+H E P
Sbjct: 176 ECEFCGKKFHQKSDMKKHTYTHTGEKP 202
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 533 QCPVCDEEFHNNITLMTHIYSH 598
QC VC++ F + TL TH+ H
Sbjct: 148 QCNVCEKAFKRSSTLSTHMLIH 169
>SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1122
Score = 28.7 bits (61), Expect = 4.0
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 536 CPVCDEEFHNNITLMTHIYSH 598
C CD+ F ++ L+ H+YSH
Sbjct: 1010 CKKCDKRFAHSTVLLRHLYSH 1030
>SB_12468| Best HMM Match : zf-C2H2 (HMM E-Value=9.8e-30)
Length = 824
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 536 CPVCDEEFHNNITLMTHIYSHVVEPP 613
CP C++ F N L HI +H E P
Sbjct: 685 CPFCNKAFAENRCLQVHIRTHTGERP 710
>SB_52826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2126
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 524 IAVQCPVCDEEFHNNITLMTHIYSHVVEP 610
I V+CP C + F + L H+ SH EP
Sbjct: 674 IKVRCPQCRDSFDHPRVLSMHLKSHHSEP 702
>SB_37102| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 618
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 533 QCPVCDEEFHNNITLMTHIYSHVVEPP 613
+C VCD F + TH+Y H E P
Sbjct: 481 KCEVCDRAFTRRDEMHTHMYIHKGEKP 507
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +2
Query: 533 QCPVCDEEFHNNITLMTHIYSHVVEPP 613
+C +C + F L TH+Y H E P
Sbjct: 537 KCKLCPKSFTQYRNLQTHMYKHTGERP 563
>SB_8254| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 684
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 533 QCPVCDEEFHNNITLMTHIYSHVVEPP 613
+CPVC + F L H SH+ E P
Sbjct: 38 ECPVCGKSFLYPCALKRHAASHLTEKP 64
>SB_2510| Best HMM Match : zf-C2H2 (HMM E-Value=6.1e-15)
Length = 230
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 533 QCPVCDEEFHNNITLMTHIYSHVVEPP 613
QC C++EF N+ L H+ H E P
Sbjct: 169 QCTHCEKEFKNSYELGRHVRVHTGEKP 195
>SB_49284| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1041
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +2
Query: 533 QCPVCDEEFHNNITLMTHIYSHV-VEP 610
+C C + F++ I L HIYSH V+P
Sbjct: 877 KCNFCGKGFNDKIVLEKHIYSHTGVKP 903
>SB_34889| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 615
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/75 (21%), Positives = 32/75 (42%)
Frame = +2
Query: 389 TYVDDDLDDIPLKNIKKEIQPEETVSMEKYYFGKLGSDEPGPRVAIAVQCPVCDEEFHNN 568
T D+ +++ + +I++E + + + + K S P +CP C + F
Sbjct: 326 TQTGDEKEEVIVGSIREE---QRSTKIGQLSIKKSNSKTPADDRTRDHECPTCAKRFFTK 382
Query: 569 ITLMTHIYSHVVEPP 613
L H ++H E P
Sbjct: 383 NDLKRHGFTHSTERP 397
>SB_17982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 474
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 533 QCPVCDEEFHNNITLMTHIYSHVVEPP 613
QC +C++ F TL+ HI +H E P
Sbjct: 382 QCHLCEKAFTKPATLVDHIRTHSSERP 408
Score = 27.5 bits (58), Expect = 9.1
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +2
Query: 533 QCPVCDEEFHNNITLMTHIYSHVVEPP 613
+CP+C F + L H+ +H + P
Sbjct: 354 RCPICQRHFSRRVGLRFHVQAHSGDKP 380
>SB_6551| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 330
Score = 27.9 bits (59), Expect = 6.9
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +2
Query: 533 QCPVCDEEFHNNITLMTHIYSH 598
+C +C++ F+ + TL THI +H
Sbjct: 220 KCHICNKAFNRSSTLKTHIRTH 241
>SB_53412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1459
Score = 27.9 bits (59), Expect = 6.9
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +2
Query: 524 IAVQCPVCDEEFHNNITLMTHIYSHVVE 607
+ C +C++ F +L +H+YSH E
Sbjct: 278 VPYNCSLCEKSFAKKRSLKSHMYSHSTE 305
>SB_56992| Best HMM Match : Copper-bind (HMM E-Value=0.82)
Length = 1642
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 395 VDDDLDDIPLKNIKKEIQPEETVSMEKYYFGKLGSDEP 508
V+DDLD+ ++++ + +P E S E + GS EP
Sbjct: 1440 VEDDLDESAERDVETDGKPYENKSTEPHDEHDTGSQEP 1477
>SB_48551| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 560
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 533 QCPVCDEEFHNNITLMTHIYSHVVEPP 613
+CP C++ F + L TH+ H E P
Sbjct: 410 KCPYCEKAFTASSILRTHVRQHSGEKP 436
>SB_24575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1741
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 365 RRSRKQPKTYVDDDLDDIPLKNIKKEIQPEETVSMEKYYF 484
R S K P + +D+DDI L +K + +E ++ K F
Sbjct: 1557 RASGKSPLLWTPEDMDDIILTGDRKHRETQEKMNRSKTSF 1596
>SB_22443| Best HMM Match : Prosystemin (HMM E-Value=6.7)
Length = 274
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 395 VDDDLDDIPLKNIKKEIQPEETVSMEKYYFGKLGSDEP 508
V+DDLD+ ++++ + +P E S E + GS EP
Sbjct: 72 VEDDLDESAERDVETDGKPYENKSTEPHDEHDTGSQEP 109
>SB_21384| Best HMM Match : 7tm_1 (HMM E-Value=8.6e-05)
Length = 442
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/61 (21%), Positives = 25/61 (40%)
Frame = +2
Query: 380 QPKTYVDDDLDDIPLKNIKKEIQPEETVSMEKYYFGKLGSDEPGPRVAIAVQCPVCDEEF 559
QP + + + +N ++ E ++ E+Y G S PR+ + P C +
Sbjct: 322 QPSCFARHNTRRVYARNNRRYFMRESDINPERYIVGNNKSISQSPRILVPAAKPRCAQVG 381
Query: 560 H 562
H
Sbjct: 382 H 382
>SB_38222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 356
Score = 27.5 bits (58), Expect = 9.1
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 536 CPVCDEEFHNNITLMTHIYSH 598
CP C FH I L++H+ +H
Sbjct: 332 CPECGRAFHARIGLVSHLRTH 352
>SB_22835| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 594
Score = 27.5 bits (58), Expect = 9.1
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 533 QCPVCDEEFHNNITLMTHIYSHVVEPP 613
+C +C+++F L H+ HV E P
Sbjct: 295 KCEMCEQDFPGQTELAEHVRKHVGEKP 321
>SB_9370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +2
Query: 464 SMEKYYFGKLGSDEPGPRVAIAVQCPVCDEEFHNNITLMTHIYSHVVEP 610
+ E F + + PG ++ QC VC + F+ T+ H+ SH P
Sbjct: 11 AQESRVFTNVETLTPGQKL---FQCTVCGKVFNRKYTMQRHMRSHSDNP 56
>SB_6634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 123
Score = 27.5 bits (58), Expect = 9.1
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = +1
Query: 424 EEHQEGDPTRGDRVDGEVLLREARQ*RARTQGGHCSTMPGL*RGVPQQHNPDDPHL 591
E H EG + + V E +R RAR +GG G RG+ + NPD+ L
Sbjct: 6 EAHPEGSSSSDESVGEEATSSASRPVRARGRGG------GRRRGLHRAQNPDNTAL 55
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,934,903
Number of Sequences: 59808
Number of extensions: 228796
Number of successful extensions: 861
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 861
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1512078125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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