Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0156
(668 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 208 4e-54
SB_56| Best HMM Match : Actin (HMM E-Value=0) 208 4e-54
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 208 4e-54
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 207 7e-54
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 185 3e-47
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 126 1e-29
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 118 4e-27
SB_54| Best HMM Match : Actin (HMM E-Value=0) 111 7e-25
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 87 2e-17
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 71 1e-12
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 69 3e-12
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 52 4e-07
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 3e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 41 8e-04
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_33342| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 31 0.64
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.64
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 31 0.85
SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 31 1.1
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 31 1.1
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 31 1.1
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 31 1.1
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 30 1.5
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 30 1.5
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 2.0
SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7) 29 2.6
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 29 3.4
SB_59672| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 29 4.5
SB_43189| Best HMM Match : PGAMP (HMM E-Value=2.1) 29 4.5
SB_41600| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_8748| Best HMM Match : Astacin (HMM E-Value=0) 29 4.5
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 28 6.0
SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 28 6.0
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 28 6.0
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) 28 6.0
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 28 6.0
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 28 6.0
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 28 6.0
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 28 6.0
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 28 6.0
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 28 7.9
SB_44377| Best HMM Match : Extensin_2 (HMM E-Value=1.3) 28 7.9
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 208 bits (507), Expect = 4e-54
Identities = 102/132 (77%), Positives = 106/132 (80%)
Frame = +2
Query: 251 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 430
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 431 QIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTPATVSPTPCPSTKDTHSPTPSLRMDL 610
QIMFETFN+PAMYVAIQAVLSLYASG P + P LR+DL
Sbjct: 121 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180
Query: 611 AGRDLTDYLMKI 646
AGRDLTDYLMKI
Sbjct: 181 AGRDLTDYLMKI 192
Score = 125 bits (302), Expect = 3e-29
Identities = 57/60 (95%), Positives = 60/60 (100%)
Frame = +3
Query: 75 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 254
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 208 bits (507), Expect = 4e-54
Identities = 102/132 (77%), Positives = 106/132 (80%)
Frame = +2
Query: 251 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 430
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 431 QIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTPATVSPTPCPSTKDTHSPTPSLRMDL 610
QIMFETFN+PAMYVAIQAVLSLYASG P + P LR+DL
Sbjct: 121 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180
Query: 611 AGRDLTDYLMKI 646
AGRDLTDYLMKI
Sbjct: 181 AGRDLTDYLMKI 192
Score = 126 bits (305), Expect = 1e-29
Identities = 58/60 (96%), Positives = 60/60 (100%)
Frame = +3
Query: 75 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 254
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 208 bits (507), Expect = 4e-54
Identities = 102/132 (77%), Positives = 106/132 (80%)
Frame = +2
Query: 251 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 430
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 431 QIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTPATVSPTPCPSTKDTHSPTPSLRMDL 610
QIMFETFN+PAMYVAIQAVLSLYASG P + P LR+DL
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 181
Query: 611 AGRDLTDYLMKI 646
AGRDLTDYLMKI
Sbjct: 182 AGRDLTDYLMKI 193
Score = 132 bits (320), Expect = 2e-31
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +3
Query: 69 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 248
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 249 SK 254
SK
Sbjct: 61 SK 62
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 207 bits (505), Expect = 7e-54
Identities = 101/132 (76%), Positives = 106/132 (80%)
Frame = +2
Query: 251 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 430
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 431 QIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTPATVSPTPCPSTKDTHSPTPSLRMDL 610
QIMFETFN+PAMYVAIQAVLSLYASG P + P +R+DL
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDL 181
Query: 611 AGRDLTDYLMKI 646
AGRDLTDYLMKI
Sbjct: 182 AGRDLTDYLMKI 193
Score = 128 bits (309), Expect = 4e-30
Identities = 59/62 (95%), Positives = 61/62 (98%)
Frame = +3
Query: 69 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 248
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 249 SK 254
SK
Sbjct: 61 SK 62
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 185 bits (451), Expect = 3e-47
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +2
Query: 251 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 430
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 431 QIMFETFNTPAMYVAIQAVLSLYASG 508
QIMFETFN+PAMYVAIQAVLSLYASG
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYASG 147
Score = 128 bits (309), Expect = 4e-30
Identities = 57/62 (91%), Positives = 61/62 (98%)
Frame = +3
Query: 69 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 248
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 249 SK 254
SK
Sbjct: 61 SK 62
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/25 (84%), Positives = 23/25 (92%), Gaps = 2/25 (8%)
Frame = +1
Query: 511 TTGIVLDSGDGVSHTVPIYE--GYA 579
TTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 149 TTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 126 bits (305), Expect = 1e-29
Identities = 57/60 (95%), Positives = 60/60 (100%)
Frame = +3
Query: 75 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 254
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 77.4 bits (182), Expect = 1e-14
Identities = 43/78 (55%), Positives = 49/78 (62%)
Frame = +2
Query: 413 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTPATVSPTPCPSTKDTHSPTP 592
N + M +IMFETFN+PAMYVAIQAVLSLYASG P + P
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 593 SLRMDLAGRDLTDYLMKI 646
+R+DLAGRDLTDYLMKI
Sbjct: 138 IIRLDLAGRDLTDYLMKI 155
Score = 63.3 bits (147), Expect = 2e-10
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = +1
Query: 511 TTGIVLDSGDGVSHTVPIYEGYALPHAILAYGLS 612
TTGIV+DSGDGV+HTVPIYEGYALPHAI+ L+
Sbjct: 111 TTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLA 144
Score = 60.9 bits (141), Expect = 9e-10
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = +2
Query: 251 QRGILTLKYPIEHGIVTNWDDMEKIWHHTF 340
+RGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 118 bits (284), Expect = 4e-27
Identities = 57/135 (42%), Positives = 85/135 (62%), Gaps = 1/135 (0%)
Frame = +2
Query: 245 TEQRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANRE 421
++ R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NRE
Sbjct: 62 SQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNRE 121
Query: 422 KMTQIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTPATVSPTPCPSTKDTHSPTPSLR 601
KM ++MFE + +Y+AIQAVL+LYA G+ CP + P + R
Sbjct: 122 KMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRR 181
Query: 602 MDLAGRDLTDYLMKI 646
+D+AGRD+T YL+K+
Sbjct: 182 LDIAGRDITKYLIKL 196
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +3
Query: 87 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEA 245
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEA 61
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 111 bits (266), Expect = 7e-25
Identities = 56/109 (51%), Positives = 72/109 (66%)
Frame = +2
Query: 320 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 499
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 500 ASGVPPVSCWTPATVSPTPCPSTKDTHSPTPSLRMDLAGRDLTDYLMKI 646
ASG + + P P + R+DLAGRDLT YL ++
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRL 2237
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 93 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 194
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 86.6 bits (205), Expect = 2e-17
Identities = 42/90 (46%), Positives = 57/90 (63%)
Frame = +2
Query: 368 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTPATVS 547
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+G
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 548 PTPCPSTKDTHSPTPSLRMDLAGRDLTDYL 637
P + P +R D+AGRD++ YL
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSRYL 215
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 70.5 bits (165), Expect = 1e-12
Identities = 39/71 (54%), Positives = 45/71 (63%)
Frame = +2
Query: 434 IMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTPATVSPTPCPSTKDTHSPTPSLRMDLA 613
IMFE FN+PA+YVAIQAVLSLYASG + P + P LR+DLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 614 GRDLTDYLMKI 646
GRDLTDYLMK+
Sbjct: 61 GRDLTDYLMKL 71
Score = 62.1 bits (144), Expect = 4e-10
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +1
Query: 511 TTGIVLDSGDGVSHTVPIYEGYALPHAILAYGLS 612
TTG+V DSGDGVSH VPIYEGYALPHAIL L+
Sbjct: 27 TTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 69.3 bits (162), Expect = 3e-12
Identities = 28/77 (36%), Positives = 50/77 (64%)
Frame = +2
Query: 278 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 457
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 458 PAMYVAIQAVLSLYASG 508
PA ++ +VL+ +A+G
Sbjct: 63 PAFFLCKNSVLTAFANG 79
Score = 31.5 bits (68), Expect = 0.64
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 511 TTGIVLDSGDGVSHTVPIYEGYALPHAIL 597
+ G+V+DSG + VP+++GY L AI+
Sbjct: 81 SNGLVIDSGATQTSAVPVHDGYVLQQAIV 109
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 78 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 194
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Frame = +3
Query: 63 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 233
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 234 GDEAQSK 254
GD A +K
Sbjct: 753 GDAAVAK 759
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +2
Query: 272 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 385
K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 33.5 bits (73), Expect = 0.16
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1
Query: 505 RCTTGIVLDSGDGVSHTVPI 564
R TG V+DSGDGV+H +P+
Sbjct: 353 RTLTGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -1
Query: 191 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 75
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 41.1 bits (92), Expect = 8e-04
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 505 RCTTGIVLDSGDGVSHTVPIYEGYALPHAI 594
R TG V+DSGDGV+H +P+ EGY + I
Sbjct: 59 RTLTGCVIDSGDGVTHVIPVAEGYVIGSCI 88
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 269 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 421
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.64
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 166 GNTARGASSPAKPALHIPEPLSTT 95
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_33342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1189
Score = 31.5 bits (68), Expect = 0.64
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 12/77 (15%)
Frame = +2
Query: 437 MFETFNTPAM-YVAIQAVLSLYASGVP------PVSCWTPATV-----SPTPCPSTKDTH 580
M++ F T ++ + A LS+Y +GVP P + TP T+ +PTP P+T +
Sbjct: 449 MYQCFATNSLGSIQASAELSVYKTGVPLPTTRLPTTAQTPTTILPPTTTPTPPPTTTEPQ 508
Query: 581 SPTPSLRMDLAGRDLTD 631
P P ++ R ++D
Sbjct: 509 RP-PDPPRNVQARTISD 524
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 31.5 bits (68), Expect = 0.64
Identities = 28/103 (27%), Positives = 40/103 (38%), Gaps = 3/103 (2%)
Frame = +2
Query: 335 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGVP 514
T E VAP + TE P+ T + ET P +A + + + P
Sbjct: 205 TAAQETTVAPGT--TVATETTAAPETTTAPETTMALETTVAPEATMAPETTVVPDTTVEP 262
Query: 515 PVSCW---TPATVSPTPCPSTKDTHSPTPSLRMDLAGRDLTDY 634
S T T P P+T +S TPS++ +L TDY
Sbjct: 263 ETSTTLKPTDVTEKPEASPATPAEYSTTPSVQPELTEAPQTDY 305
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.64
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 166 GNTARGASSPAKPALHIPEPLSTT 95
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 31.1 bits (67), Expect = 0.85
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -1
Query: 257 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 114
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 213 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1065
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/79 (25%), Positives = 37/79 (46%)
Frame = +2
Query: 353 RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWT 532
++A + +P + E N K + +K+ Q M +T + + ++ +A +P W
Sbjct: 866 KIASKHNPEMTEEMRANLKEHLDKINQRMNDTMT---LLYNMPKIMRKFAFELPN---WA 919
Query: 533 PATVSPTPCPSTKDTHSPT 589
P PT P+ K T +PT
Sbjct: 920 PKIPLPTEPPTEKMTEAPT 938
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -1
Query: 257 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 114
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 408 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Frame = -1
Query: 257 LFALCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQ 93
+FA CL + V+LSH + H L A +HG R+ SCET L H A + +
Sbjct: 461 IFATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNK 519
Query: 92 RGNFFVAHLELVK 54
G V L+ K
Sbjct: 520 HGQVDVLLLDFQK 532
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -1
Query: 257 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 114
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 271 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -1
Query: 257 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 114
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 249 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -1
Query: 257 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 114
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -1
Query: 257 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 114
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -1
Query: 257 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 114
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 125 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 166 GNTARGASSPAKPALHIPEPLSTT 95
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 394 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 486
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +2
Query: 500 ASGVPPVSCWTPATVSPTPCPS--TKDTHSPTPSLRMD--LAGRDLTDYLMKIPHP 655
AS + P C+T T+SP PC + T T SL + LT L+ IPHP
Sbjct: 520 ASHLSPKPCFTSLTLSPKPCFTFLTLSTKPCFTSLTLSPKPCFTPLTQALLHIPHP 575
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -1
Query: 257 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 114
L +C ++LSH + H M D +HG RS SCET L T
Sbjct: 173 LTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 278 PIEHGIVTNWDDMEKIWHHTFYNE 349
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 81 EVAALVVDNGSGMCKAGFAGDDAPRAV 161
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7)
Length = 186
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = -3
Query: 372 CSSGATRSSL*KV*CQIFSMSSQLVTIPCSMG--YLRVRIPLCSVPHLLHKSPSVPYRPS 199
CS + + C + ++V CS Y+ V +CS + H+ PS
Sbjct: 88 CSPSRAHVDVFPITCSCRCVPHRMVMSMCSPSRVYVDVSPIVCSCRCVPHRVLMSMCSPS 147
Query: 198 RPDGGAFPRSRGTRREEHHLLRNRPCTYRSH 106
R D FP + R HH+L + + R+H
Sbjct: 148 RADVDVFPITCSRRCVFHHVLMSMCSSSRAH 178
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 29.1 bits (62), Expect = 3.4
Identities = 27/99 (27%), Positives = 33/99 (33%), Gaps = 4/99 (4%)
Frame = +2
Query: 332 HTFYNELRVAP--EEHPVLLTEAPLNPKAN--REKMTQIMFETFNTPAMYVAIQAVLSLY 499
HT N AP HP L P+A M + ET P M V
Sbjct: 276 HTISNPAMAAPWVTPHPATLPVTLFTPQAAPVTPPMGAQLPET-EQPQMVAPSSTVTPPV 334
Query: 500 ASGVPPVSCWTPATVSPTPCPSTKDTHSPTPSLRMDLAG 616
PP S P PTP + +P PS+ +G
Sbjct: 335 TEPAPPSSVVAPPPAVPTPATAPPPVVAPPPSVFASSSG 373
>SB_59672| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +1
Query: 436 HVRNIQHARHVRRHPSRALAVRVRCTTGIVL 528
H H+RH H + L VR CTT I L
Sbjct: 129 HDTTRSHSRHDHTHDTSTLMVRPHCTTRITL 159
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/73 (30%), Positives = 28/73 (38%)
Frame = +2
Query: 374 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTPATVSPT 553
PVL A P A + TQ + P ++ V + A PPV P TV P
Sbjct: 22 PVLTEAATTQPPAPPPEPTQAPVADTDPPTNPPSVVEVTTTQAPPPPPVVTEAPTTV-PP 80
Query: 554 PCPSTKDTHSPTP 592
P + T P P
Sbjct: 81 PVVTDAPTTVPPP 93
>SB_43189| Best HMM Match : PGAMP (HMM E-Value=2.1)
Length = 461
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/76 (25%), Positives = 29/76 (38%), Gaps = 3/76 (3%)
Frame = +1
Query: 382 AH*GSPQPQGQQREDDPDHVRNIQHARHVRRHP---SRALAVRVRCTTGIVLDSGDGVSH 552
+H G+ P P H + H RHP +++ V R T + S +H
Sbjct: 161 SHTGTKSPMLSTHGTTPSHGYQVNHGLRTVRHPHTGTKSTMVYARYDTLTRVPSHPCATH 220
Query: 553 TVPIYEGYALPHAILA 600
GY + HA+ A
Sbjct: 221 GTTPSHGYQVTHALYA 236
>SB_41600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 416
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +2
Query: 449 FNTPAMYVAIQAVLSLYASGVPPVSCWTPATVSPTPCPSTKDTHSPTPSLRMDL 610
F P A+ + + ++ +PP+ PA P P+T SP P+ R ++
Sbjct: 321 FFGPKALSAVTVIENRISAPLPPIPRTRPAMTPPPISPTTGPPKSPAPTRREEM 374
>SB_8748| Best HMM Match : Astacin (HMM E-Value=0)
Length = 757
Score = 28.7 bits (61), Expect = 4.5
Identities = 24/98 (24%), Positives = 35/98 (35%)
Frame = +2
Query: 374 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTPATVSPT 553
P L +AP + + T ET T ++ S ASG PP +PT
Sbjct: 518 PAGLNQAPTSSPSASTNPTPTTAETAGTSGAPTSVPPASSAPASGAPPSGAPASGATTPT 577
Query: 554 PCPSTKDTHSPTPSLRMDLAGRDLTDYLMKIPHPSAAT 667
P + S P+ A + + P S+AT
Sbjct: 578 TGPISGAPASNGPTSGSTGANQPTSGSTSANPTTSSAT 615
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 257 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 114
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 242 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288
>SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6753
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 533 ESSTIPVVHRTRTARARLGWRR 468
E + + V+HRTR R R WRR
Sbjct: 5451 EKAFLAVIHRTRDRRRRCRWRR 5472
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 166 GNTARGASSPAKPALHIPEPLSTT 95
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3176
Score = 28.3 bits (60), Expect = 6.0
Identities = 24/70 (34%), Positives = 34/70 (48%)
Frame = -3
Query: 318 SMSSQLVTIPCSMGYLRVRIPLCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEHHL 139
+++SQ VT M R +PL S P + KSP V + P PD + R E HH
Sbjct: 792 ALTSQQVTSSHDMP--RTSMPLVSYPPHMKKSPFVVHHP--PDSAS--RHGNQAPEAHH- 844
Query: 138 LRNRPCTYRS 109
+ P +Y+S
Sbjct: 845 --HEPGSYKS 852
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 166 GNTARGASSPAKPALHIPEPLSTT 95
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 161 VPLDRGKAPPSGRDGRYGTEGLLCRR*GTEQRGILTLKYPIEHGIVTNW--DDMEKIWHH 334
V L + +GR+ G+ +CR+ + ++TL + I G+ + D EK+W+H
Sbjct: 441 VTLSQNVVSVTGREESGGSGTQVCRK----KAPLITLSHVIRMGLALSLVSDVKEKVWYH 496
Query: 335 TFYN 346
T N
Sbjct: 497 TCPN 500
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 257 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 114
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 257 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 114
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 1641 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 257 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 114
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 669 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 257 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 114
L LC + ++LSH + H L +HG R +SCET L T
Sbjct: 854 LTCLCCKTMEHIVLSHLNKH-LSRFNILSNAQHGFRQGLSCETQLVLT 900
>SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2)
Length = 563
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +3
Query: 438 CSKHSTRPPCTSPSKPCSRCTRPVYHRYRAG 530
C H+ R P T+PS PC Y AG
Sbjct: 360 CYSHARREPSTAPSLPCDLVAATSAKMYLAG 390
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/93 (21%), Positives = 38/93 (40%), Gaps = 4/93 (4%)
Frame = +2
Query: 326 WHHTFYNELRVAPEEH----PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLS 493
+ H Y + P H P T P P+ + + ++ + P+ ++ +
Sbjct: 170 YKHPSYPTYNIPPTPHTSIPPTPHTSIPPTPRPTYKHPSYPSYKHPSYPSSHIQASLLPH 229
Query: 494 LYASGVPPVSCWTPATVSPTPCPSTKDTHSPTP 592
+ AS +P + ++ PTP P T +PTP
Sbjct: 230 IQASLLPLIP---NTSIPPTPTPHTSIPPTPTP 259
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 257 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 114
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 224 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 257 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 114
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 1079 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 257 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 114
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 22 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 257 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 114
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 9/54 (16%)
Frame = -3
Query: 309 SQLVTIPCSMGYLRVRIPLCSVPHLLHKS---------PSVPYRPSRPDGGAFP 175
S+ ++IP G+ R L P L H S P+ PY PS+ G +FP
Sbjct: 3759 SKPISIPSRDGHARAATSLPGSPQLSHLSGRFSSDDVSPTPPYSPSQKQGFSFP 3812
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 27.9 bits (59), Expect = 7.9
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Frame = +2
Query: 347 ELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGVP 514
E VAPE L E P+ + +T P VAI++ L+L ++ P
Sbjct: 19 ETTVAPETTSAADTTLAPETTFAPETTVPPESTAAPDTTVAPETTVAIESTLALESTVAP 78
Query: 515 PVSCWTPATVSPTPCPSTKDTHSP 586
+ T TV+P + + T +P
Sbjct: 79 ETTVATETTVAPETTAAPESTLAP 102
>SB_44377| Best HMM Match : Extensin_2 (HMM E-Value=1.3)
Length = 507
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/41 (26%), Positives = 19/41 (46%)
Frame = +2
Query: 527 WTPATVSPTPCPSTKDTHSPTPSLRMDLAGRDLTDYLMKIP 649
W P T+ T + + P L+M++ + + DY K P
Sbjct: 322 WDPKTIGRTQMMKPEMSTHVNPDLKMEVMTQTMVDYTQKAP 362
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,089,104
Number of Sequences: 59808
Number of extensions: 645778
Number of successful extensions: 2577
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 2141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2536
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1729817375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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