Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0080
(619 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52560| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 6e-09
SB_58879| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_42132| Best HMM Match : DAGK_cat (HMM E-Value=1.3e-35) 37 0.015
SB_31002| Best HMM Match : RhoGAP (HMM E-Value=0) 36 0.026
SB_14778| Best HMM Match : MH1 (HMM E-Value=2.8026e-45) 33 0.19
SB_15490| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_35913| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 32 0.32
SB_2440| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_53685| Best HMM Match : bZIP_2 (HMM E-Value=0.99) 29 3.0
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_38936| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_39590| Best HMM Match : PHD (HMM E-Value=2.2e-18) 29 4.0
SB_58672| Best HMM Match : PHD (HMM E-Value=3e-18) 29 4.0
SB_33144| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_32010| Best HMM Match : Ada_Zn_binding (HMM E-Value=5.2) 28 5.3
SB_29741| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_29231| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_54962| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_40368| Best HMM Match : SASP_gamma (HMM E-Value=2.3) 28 5.3
SB_31839| Best HMM Match : Exo_endo_phos (HMM E-Value=1.3e-11) 28 5.3
SB_1597| Best HMM Match : PHD (HMM E-Value=1.4e-05) 28 5.3
SB_58132| Best HMM Match : DGPF (HMM E-Value=8.7) 28 7.0
SB_53148| Best HMM Match : rve (HMM E-Value=4.8e-21) 28 7.0
SB_52774| Best HMM Match : rve (HMM E-Value=2e-17) 28 7.0
SB_44206| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_40452| Best HMM Match : Upf2 (HMM E-Value=4.3) 28 7.0
SB_31616| Best HMM Match : rve (HMM E-Value=6.9e-21) 28 7.0
SB_24272| Best HMM Match : RVT_1 (HMM E-Value=6.7e-21) 28 7.0
SB_22261| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_17261| Best HMM Match : rve (HMM E-Value=6.9e-21) 28 7.0
SB_59670| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_47642| Best HMM Match : RVT_1 (HMM E-Value=6.7e-21) 28 7.0
SB_46069| Best HMM Match : NOPS (HMM E-Value=2) 28 7.0
SB_45481| Best HMM Match : rve (HMM E-Value=3.1e-17) 28 7.0
SB_38537| Best HMM Match : VWA (HMM E-Value=0) 28 7.0
SB_23407| Best HMM Match : rve (HMM E-Value=6.9e-21) 28 7.0
SB_22926| Best HMM Match : DGPF (HMM E-Value=8) 28 7.0
SB_21805| Best HMM Match : Upf2 (HMM E-Value=4) 28 7.0
SB_14016| Best HMM Match : rve (HMM E-Value=0.0027) 28 7.0
SB_12433| Best HMM Match : RVT_1 (HMM E-Value=0.00019) 28 7.0
SB_12115| Best HMM Match : rve (HMM E-Value=6.9e-21) 28 7.0
SB_2465| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_619| Best HMM Match : rve (HMM E-Value=0.027) 28 7.0
SB_49290| Best HMM Match : SAM_1 (HMM E-Value=2) 27 9.2
SB_43554| Best HMM Match : LIM (HMM E-Value=0.91) 27 9.2
SB_20112| Best HMM Match : EGF (HMM E-Value=0) 27 9.2
SB_53226| Best HMM Match : ResIII (HMM E-Value=0.45) 27 9.2
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_33601| Best HMM Match : Metallophos (HMM E-Value=6.4e-19) 27 9.2
SB_32722| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_24514| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_22850| Best HMM Match : CXC (HMM E-Value=0.22) 27 9.2
SB_16070| Best HMM Match : IncA (HMM E-Value=0.43) 27 9.2
SB_2062| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_552| Best HMM Match : Laminin_EGF (HMM E-Value=1.3e-23) 27 9.2
>SB_52560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1263
Score = 58.0 bits (134), Expect = 6e-09
Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 1/108 (0%)
Frame = +2
Query: 83 SLTLYDMRVLRACGVRGLRSCGLQGERDVLRGQRASTRAPLAR-GQPAGQLQVCRVPPPC 259
S T+ D V AC + C G+RA + R G + + C
Sbjct: 715 STTVCDYYVHEACQDFSVTDCKQSATYVPFLGKRAVKQDHHWREGNFSASSKCVSCKHSC 774
Query: 260 CSTECLTGYRCEWCGTTCHAGCRALILEECNFGMLQPIFLPPSAVSIP 403
S ECL +C WC + H C L+ +EC++G L + LPP VS P
Sbjct: 775 GSGECLASLKCSWCAQSSHTNCSQLLPKECHYGYLHRVSLPPFCVSFP 822
>SB_58879| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1786
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +2
Query: 218 PAGQLQVCRVPPPCCSTECLTGYRCEWCGTTCHAGCRALILEECNFGMLQPIFLPP 385
P + VC PC S L +RC WC T H C+ ++ +C G LPP
Sbjct: 782 PGARCTVCE--RPCGSKRRLLDFRCLWCNMTVHHSCKLSVVSKCTLGENSLSVLPP 835
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 9/55 (16%)
Frame = +3
Query: 102 CEYYVHAECVDFAAADCK--------ENATYCAGSEPRHV-HHWREGNLPANSKC 239
C + H C A +CK ++ C S+P + H W EGNL ++C
Sbjct: 732 CRFKSHKRCAAKAPNNCKWTTMQAIRKDNEDCDNSDPMSMPHQWLEGNLTPGARC 786
>SB_42132| Best HMM Match : DAGK_cat (HMM E-Value=1.3e-35)
Length = 558
Score = 36.7 bits (81), Expect = 0.015
Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Frame = +2
Query: 188 STRAPLARGQPAGQLQVCRVPPPC---CSTEC-LTGYRCEWCGTTCHAGCRALILEECNF 355
S R+ L G L +C C C T L RC WC H C C+F
Sbjct: 196 SRRSSLKHHYIRGNLPLCSYCSVCGCLCGTAPRLCDQRCIWCQEKVHDDCLRNQSMICDF 255
Query: 356 GMLQPIFLPPSAVSI 400
G + + LPP +S+
Sbjct: 256 GRYRTLILPPHCISL 270
Score = 36.3 bits (80), Expect = 0.020
Identities = 23/70 (32%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Frame = +3
Query: 36 KRKFCTVCRKRLDELPALHCMICEYYVHAECVDFA--AADCKENATYCAGSEPRHVHHWR 209
K +C C L + LHC C VH EC++ A CK HH+
Sbjct: 152 KPSYCNACENAL--VRGLHCENCTLSVHDECLETANEVFTCK---ALVLSRRSSLKHHYI 206
Query: 210 EGNLPANSKC 239
GNLP S C
Sbjct: 207 RGNLPLCSYC 216
>SB_31002| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 1250
Score = 35.9 bits (79), Expect = 0.026
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = +2
Query: 203 LARGQPAGQLQVCRVPPPC--CSTEC-LTGYRCEWCGTTCHAGCRALILEECNF 355
++ G Q + R P C C + G CE CG TCH C A + +C++
Sbjct: 170 MSSGALTHQFKKLRAPSRCRDCDSYVYFNGAECEQCGLTCHKRCLARLTNKCSY 223
>SB_14778| Best HMM Match : MH1 (HMM E-Value=2.8026e-45)
Length = 1133
Score = 33.1 bits (72), Expect = 0.19
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 33 HKRKFCTVCRKRLDELPALHCMICEYYVHAECVDFAAAD 149
HK C +CR+R + ++ C C ++HA C D AD
Sbjct: 437 HKSSACPLCRQRNGQPQSVQCDSCSRWIHAAC-DGITAD 474
>SB_15490| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 33.1 bits (72), Expect = 0.19
Identities = 28/103 (27%), Positives = 43/103 (41%)
Frame = +2
Query: 212 GQPAGQLQVCRVPPPCCSTECLTGYRCEWCGTTCHAGCRALILEECNFGMLQPIFLPPSA 391
G G+L + PP T L +R C AG R+ + L I PP
Sbjct: 149 GSALGRLTTKKKTPPR-RTNLLEAFRAATCTP---AGSRSSSISPGMRSSLGSI-APPPR 203
Query: 392 VSIPRTEVPMEAIIGVHVRPPPSQRDFAARAASEKSSTRLRRT 520
S PR+ + + G +R P + ++RA+S +S+ R T
Sbjct: 204 TSTPRSRSTLRSRAGSRIRTPSTPTTTSSRASSRESARGTRTT 246
>SB_35913| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1176
Score = 32.3 bits (70), Expect = 0.32
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Frame = +2
Query: 341 EECNFGMLQPIFLPPSAVSIPRTE--VPMEAIIGVHVRPPPSQRDFAARAASEKSSTRLR 514
+EC+ ++P P S E V ++ +G H R PS D ++ K + + R
Sbjct: 917 QECDGLQIEPASCEPPTQSSQYNESLVGCKSPVGGHRRLAPSLSDTEIMSSHLKETVKRR 976
Query: 515 RTFGLPKGLHLGRLSTRNIGRTQATPVIEHQ 607
RT L +GR ++R R AT IEHQ
Sbjct: 977 RTTPFSSLLSVGRDASR--ARRSATK-IEHQ 1004
>SB_2440| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 598 DHGCCLCPANVPGRQAPQVKPLRKPECPSQP 506
D G C+ +PG P +KP++ P C P
Sbjct: 41 DTGICVYKGYLPGGGIPNIKPIQSPVCKVGP 71
>SB_53685| Best HMM Match : bZIP_2 (HMM E-Value=0.99)
Length = 716
Score = 29.1 bits (62), Expect = 3.0
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2
Query: 63 CDTPYRTCACDVSAPTS 13
C PY TC CD +AP+S
Sbjct: 307 CGKPYSTCDCDSAAPSS 323
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/69 (23%), Positives = 24/69 (34%)
Frame = +2
Query: 248 PPPCCSTECLTGYRCEWCGTTCHAGCRALILEECNFGMLQPIFLPPSAVSIPRTEVPMEA 427
P CC+ EC G C C + C ILE G + P + P++
Sbjct: 1450 PVKCCTGECPAGCLPSNCKPDCPSKCCLTILEPLQEGPNATAYCPSDCFESCKPNCPIKC 1509
Query: 428 IIGVHVRPP 454
++ P
Sbjct: 1510 CPATAIKCP 1518
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +2
Query: 218 PAGQLQVCRVPPPCCSTECLTGYRCEWCGTTCHAGCRALILEECNFGMLQPI 373
PA + C+ P C + CL R C TC C+ EC F +L+PI
Sbjct: 1230 PAVCKETCK--PECPLSCCLKDAR--GCPATCVEDCKPGCPPECCFAVLKPI 1277
>SB_38936| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 29.1 bits (62), Expect = 3.0
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2
Query: 63 CDTPYRTCACDVSAPTS 13
C PY TC CD +AP+S
Sbjct: 123 CGKPYSTCDCDSAAPSS 139
>SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 441
Score = 29.1 bits (62), Expect = 3.0
Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Frame = +2
Query: 260 CSTECLTGYRCEWCGTTC-HAGC 325
C C+T + WCG TC +GC
Sbjct: 259 CQGACVTDCKSRWCGVTCTGSGC 281
>SB_39590| Best HMM Match : PHD (HMM E-Value=2.2e-18)
Length = 1284
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Frame = +3
Query: 9 HCWSEQTHHKR-KFCTVCRKRLDE----LPALHCMICEYYVHAEC 128
HC+ T +C +C K + +HC C+++VHA C
Sbjct: 917 HCYDCGTAWDNGNYCPICEKCYSDNDFDSKMMHCNDCQHWVHASC 961
>SB_58672| Best HMM Match : PHD (HMM E-Value=3e-18)
Length = 458
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Frame = +3
Query: 9 HCWSEQTHHKR-KFCTVCRKRLDE----LPALHCMICEYYVHAEC 128
HC+ T +C +C K + +HC C+++VHA C
Sbjct: 258 HCYDCGTAWDNGNYCPICEKCYSDNDFDSKMMHCNDCQHWVHASC 302
>SB_33144| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 563
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 493 EEFNSAAKDIRASEGASLGAPVDQEHWPDTSNTR 594
E+F + +K I SE + PV+Q+ P +NTR
Sbjct: 69 EDFENKSKLIANSEQIQINLPVNQQGEPHNNNTR 102
>SB_32010| Best HMM Match : Ada_Zn_binding (HMM E-Value=5.2)
Length = 607
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +2
Query: 125 VRGLRSCGLQGERDVLRGQRASTRAPLARGQPAG 226
VRGL + G+Q R V G RA+T A A Q G
Sbjct: 59 VRGLVAQGIQSNRRVALGSRATTMAVQATFQTMG 92
>SB_29741| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 5/33 (15%)
Frame = +3
Query: 327 GRSSWKNATSACFNQFSCL-----HQQYPSRAP 410
GRS WKNA++A F +F H YP+ +P
Sbjct: 2 GRSLWKNASNAAFLRFLAFCWPFAHMFYPALSP 34
>SB_29231| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2271
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 42 KFCTVCRKRLDELP-ALHCMICEYYVHAECVDFAAADCKENA 164
+ C VC K A+ C CE + HA+CV + + K+ A
Sbjct: 1454 ELCGVCGKGCRSTQKAIECEECEKWFHAKCVRISNMEFKDYA 1495
>SB_54962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2211
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 42 KFCTVCRKRLDELP-ALHCMICEYYVHAECVDFAAADCKENA 164
+ C VC K A+ C CE + HA+CV + + K+ A
Sbjct: 104 ELCGVCGKGCRSTQKAIECEECEKWFHAKCVRISNMEFKDYA 145
>SB_40368| Best HMM Match : SASP_gamma (HMM E-Value=2.3)
Length = 325
Score = 28.3 bits (60), Expect = 5.3
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -1
Query: 565 PGRQAPQVKPLRKPECPSQ 509
P R+ P V+P R P CP++
Sbjct: 54 PSRETPPVQPRRNPTCPAE 72
>SB_31839| Best HMM Match : Exo_endo_phos (HMM E-Value=1.3e-11)
Length = 887
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 42 KFCTVCRKRLDELP-ALHCMICEYYVHAECVDFAAADCKENA 164
+ C VC K A+ C CE + HA+CV + + K+ A
Sbjct: 114 ELCGVCGKGCRSTQKAIECEECEKWFHAKCVRISNMEFKDYA 155
>SB_1597| Best HMM Match : PHD (HMM E-Value=1.4e-05)
Length = 763
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 42 KFCTVCRKRLDELP-ALHCMICEYYVHAECVDFAAADCKENA 164
+ C VC K A+ C CE + HA+CV + + K+ A
Sbjct: 689 ELCGVCGKGCRSTQKAIECEECEKWFHAKCVRISNMEFKDYA 730
>SB_58132| Best HMM Match : DGPF (HMM E-Value=8.7)
Length = 161
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 460 SERLRCPRSVREEFNSAAKDIRASEGASLGAPVDQEHWPD-TSNTRDR 600
S+R+ PRS+R E E SL D WP T++ +DR
Sbjct: 114 SDRIVVPRSMRAEVLEDIHGAHMGESKSLSLARDYVFWPSMTAHIKDR 161
>SB_53148| Best HMM Match : rve (HMM E-Value=4.8e-21)
Length = 1329
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 460 SERLRCPRSVREEFNSAAKDIRASEGASLGAPVDQEHWPD-TSNTRDR 600
S+R+ PRS+R E E SL D WP T++ +DR
Sbjct: 940 SDRIVVPRSMRAEVLEDIHGAHMGESKSLSLARDYVFWPSMTAHIKDR 987
>SB_52774| Best HMM Match : rve (HMM E-Value=2e-17)
Length = 329
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 460 SERLRCPRSVREEFNSAAKDIRASEGASLGAPVDQEHWPD-TSNTRDR 600
S+R+ PRS+R E E SL D WP T++ +DR
Sbjct: 114 SDRIVVPRSMRAEVLEDIHGAHMGESKSLSLARDYVFWPSMTAHIKDR 161
>SB_44206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 770
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 460 SERLRCPRSVREEFNSAAKDIRASEGASLGAPVDQEHWPD-TSNTRDR 600
S+R+ PRS+R E E SL D WP T++ +DR
Sbjct: 388 SDRIVVPRSMRAEVLEDIHGAHMGESKSLSLARDYVFWPSMTAHIKDR 435
>SB_40452| Best HMM Match : Upf2 (HMM E-Value=4.3)
Length = 245
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 460 SERLRCPRSVREEFNSAAKDIRASEGASLGAPVDQEHWPD-TSNTRDR 600
S+R+ PRS+R E E SL D WP T++ +DR
Sbjct: 114 SDRIVVPRSMRAEVLEDIHGAHMGESKSLSLARDYVFWPSMTAHIKDR 161
>SB_31616| Best HMM Match : rve (HMM E-Value=6.9e-21)
Length = 1183
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 460 SERLRCPRSVREEFNSAAKDIRASEGASLGAPVDQEHWPD-TSNTRDR 600
S+R+ PRS+R E E SL D WP T++ +DR
Sbjct: 794 SDRIVVPRSMRAEVLEDIHGAHMGESKSLSLARDYVFWPSMTAHIKDR 841
>SB_24272| Best HMM Match : RVT_1 (HMM E-Value=6.7e-21)
Length = 1197
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 460 SERLRCPRSVREEFNSAAKDIRASEGASLGAPVDQEHWPD-TSNTRDR 600
S+R+ PRS+R E E SL D WP T++ +DR
Sbjct: 808 SDRIVVPRSMRAEVLEDIHGAHMGESKSLSLARDYVFWPSMTAHIKDR 855
>SB_22261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 239
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 460 SERLRCPRSVREEFNSAAKDIRASEGASLGAPVDQEHWPD-TSNTRDR 600
S+R+ PRS+R E E SL D WP T++ +DR
Sbjct: 39 SDRIVVPRSMRAEVLEDIHGAHMGESKSLSLARDYVFWPSMTAHIKDR 86
>SB_17261| Best HMM Match : rve (HMM E-Value=6.9e-21)
Length = 356
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 460 SERLRCPRSVREEFNSAAKDIRASEGASLGAPVDQEHWPD-TSNTRDR 600
S+R+ PRS+R E E SL D WP T++ +DR
Sbjct: 114 SDRIVVPRSMRAEVLEDIHGAHMGESKSLSLARDYVFWPSMTAHIKDR 161
>SB_59670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 460 SERLRCPRSVREEFNSAAKDIRASEGASLGAPVDQEHWPD-TSNTRDR 600
S+R+ PRS+R E E SL D WP T++ +DR
Sbjct: 615 SDRIVVPRSMRAEVLEDIHGAHMGESKSLSLARDYVFWPSMTAHIKDR 662
>SB_47642| Best HMM Match : RVT_1 (HMM E-Value=6.7e-21)
Length = 1336
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 460 SERLRCPRSVREEFNSAAKDIRASEGASLGAPVDQEHWPD-TSNTRDR 600
S+R+ PRS+R E E SL D WP T++ +DR
Sbjct: 892 SDRIVVPRSMRAEVLEDIHGAHMGESKSLSLARDYVFWPSMTAHIKDR 939
>SB_46069| Best HMM Match : NOPS (HMM E-Value=2)
Length = 278
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 460 SERLRCPRSVREEFNSAAKDIRASEGASLGAPVDQEHWPD-TSNTRDR 600
S+R+ PRS+R E E SL D WP T++ +DR
Sbjct: 114 SDRIVVPRSMRAEVLEDIHGAHMGESKSLSLARDYVFWPSMTAHIKDR 161
>SB_45481| Best HMM Match : rve (HMM E-Value=3.1e-17)
Length = 414
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 460 SERLRCPRSVREEFNSAAKDIRASEGASLGAPVDQEHWPD-TSNTRDR 600
S+R+ PRS+R E E SL D WP T++ +DR
Sbjct: 39 SDRIVVPRSMRAEVLEDIHGAHMGESKSLSLARDYVFWPSMTAHIKDR 86
>SB_38537| Best HMM Match : VWA (HMM E-Value=0)
Length = 1174
Score = 27.9 bits (59), Expect = 7.0
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = +2
Query: 173 RGQRASTRAPLARGQPAGQLQVCRVPPPCCST--ECLTGYRCEWCGTTCHAGCRALILEE 346
+ Q + P R QL C+ P C++ EC G +C G+ C CR + +E
Sbjct: 28 QAQTQNLVCPTVRTSALTQLN-CKSPAHNCNSDKECPDGEKCCPLGSQCELLCRKAVKQE 86
Query: 347 -CNFGMLQPIFLPPSAVSIPR 406
C + I L S P+
Sbjct: 87 RCAAAIDLAILLDASEAISPQ 107
>SB_23407| Best HMM Match : rve (HMM E-Value=6.9e-21)
Length = 327
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 460 SERLRCPRSVREEFNSAAKDIRASEGASLGAPVDQEHWPD-TSNTRDR 600
S+R+ PRS+R E E SL D WP T++ +DR
Sbjct: 39 SDRIVVPRSMRAEVLEDIHGAHMGESKSLSLARDYVFWPSMTAHIKDR 86
>SB_22926| Best HMM Match : DGPF (HMM E-Value=8)
Length = 203
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 460 SERLRCPRSVREEFNSAAKDIRASEGASLGAPVDQEHWPD-TSNTRDR 600
S+R+ PRS+R E E SL D WP T++ +DR
Sbjct: 39 SDRIVVPRSMRAEVLEDIHGAHMGESKSLSLARDYVFWPSMTAHIKDR 86
>SB_21805| Best HMM Match : Upf2 (HMM E-Value=4)
Length = 227
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 460 SERLRCPRSVREEFNSAAKDIRASEGASLGAPVDQEHWPD-TSNTRDR 600
S+R+ PRS+R E E SL D WP T++ +DR
Sbjct: 114 SDRIVVPRSMRAEVLEDIHGAHMGESKSLSLARDYVFWPSMTAHIKDR 161
>SB_14016| Best HMM Match : rve (HMM E-Value=0.0027)
Length = 430
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 460 SERLRCPRSVREEFNSAAKDIRASEGASLGAPVDQEHWPD-TSNTRDR 600
S+R+ PRS+R E E SL D WP T++ +DR
Sbjct: 114 SDRIVVPRSMRAEVLEDIHGAHMGESKSLSLARDYVFWPSMTAHIKDR 161
>SB_12433| Best HMM Match : RVT_1 (HMM E-Value=0.00019)
Length = 1234
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 460 SERLRCPRSVREEFNSAAKDIRASEGASLGAPVDQEHWPD-TSNTRDR 600
S+R+ PRS+R E E SL D WP T++ +DR
Sbjct: 563 SDRIVVPRSMRAEVLEDIHGAHMGESKSLSLARDYVFWPSMTAHIKDR 610
>SB_12115| Best HMM Match : rve (HMM E-Value=6.9e-21)
Length = 428
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 460 SERLRCPRSVREEFNSAAKDIRASEGASLGAPVDQEHWPD-TSNTRDR 600
S+R+ PRS+R E E SL D WP T++ +DR
Sbjct: 39 SDRIVVPRSMRAEVLEDIHGAHMGESKSLSLARDYVFWPSMTAHIKDR 86
>SB_2465| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 460 SERLRCPRSVREEFNSAAKDIRASEGASLGAPVDQEHWPD-TSNTRDR 600
S+R+ PRS+R E E SL D WP T++ +DR
Sbjct: 527 SDRIVVPRSMRAEVLEDIHGAHMGESKSLSLARDYVFWPSMTAHIKDR 574
>SB_619| Best HMM Match : rve (HMM E-Value=0.027)
Length = 290
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 460 SERLRCPRSVREEFNSAAKDIRASEGASLGAPVDQEHWPD-TSNTRDR 600
S+R+ PRS+R E E SL D WP T++ +DR
Sbjct: 114 SDRIVVPRSMRAEVLEDIHGAHMGESKSLSLERDYVFWPSMTAHIKDR 161
>SB_49290| Best HMM Match : SAM_1 (HMM E-Value=2)
Length = 151
Score = 27.5 bits (58), Expect = 9.2
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +2
Query: 92 LYDMRVLRACGVRGLRSCGLQ-GERDVLRGQRASTRAPLARGQPAGQLQVCRVPPPCCST 268
L D+ VLR C L CGL+ GE ++ + P + G+ L PP C +
Sbjct: 27 LDDIAVLRRCSEDDLLKCGLKMGEVKKIKWKLEEIVVPASEGELMVSLP---KEPPSCGS 83
Query: 269 ECLTGYRC 292
+ G C
Sbjct: 84 FSVPGIVC 91
>SB_43554| Best HMM Match : LIM (HMM E-Value=0.91)
Length = 334
Score = 27.5 bits (58), Expect = 9.2
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 63 CDTPYRTCACDVSAPTS 13
C PY TC C +AP+S
Sbjct: 24 CGNPYSTCGCGSAAPSS 40
>SB_20112| Best HMM Match : EGF (HMM E-Value=0)
Length = 2112
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 260 CSTECLTGYRCEWCGTTCHAG 322
C+ +C T + C W GTTC G
Sbjct: 1122 CNPKCNT-HECNWDGTTCSLG 1141
>SB_53226| Best HMM Match : ResIII (HMM E-Value=0.45)
Length = 880
Score = 27.5 bits (58), Expect = 9.2
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 63 CDTPYRTCACDVSAPTS 13
C PY TC C +AP+S
Sbjct: 806 CGNPYSTCGCGSAAPSS 822
>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4529
Score = 27.5 bits (58), Expect = 9.2
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = +3
Query: 63 KRLDELPALHCMICEYYVHAEC 128
+++ ++ + C ICE ++HAEC
Sbjct: 474 RQISDVAMVKCEICEKWLHAEC 495
>SB_33601| Best HMM Match : Metallophos (HMM E-Value=6.4e-19)
Length = 675
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 296 TRSGSQ*GTRWSSRAAARGTLGVGRQVALA 207
T + S G+ WS A G LGVG +ALA
Sbjct: 70 TFNASNAGSDWSPSFAVYGDLGVGNPMALA 99
>SB_32722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +2
Query: 239 CRVPPPCCSTECLTGYRCEWCGTTCHAGCRALILEECNFGMLQP 370
CR C T +TGY+C TC G + EE N + P
Sbjct: 104 CRNGGMCTGTTSVTGYQC-----TCREGFKGFDCEEINLCVPNP 142
>SB_24514| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/42 (26%), Positives = 17/42 (40%)
Frame = +3
Query: 48 CTVCRKRLDELPALHCMICEYYVHAECVDFAAADCKENATYC 173
C +C E L + C++ H +CVD + K C
Sbjct: 301 CAICLDEYKEGDKLRILPCDHAYHCKCVDPWLTEGKRTCPVC 342
>SB_22850| Best HMM Match : CXC (HMM E-Value=0.22)
Length = 418
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 453 RPLRETSLPAQRQRRVQLGCEGH 521
RP+ E + PAQ R ++ C GH
Sbjct: 351 RPMSEPAAPAQLLRNIKCNCGGH 373
>SB_16070| Best HMM Match : IncA (HMM E-Value=0.43)
Length = 895
Score = 27.5 bits (58), Expect = 9.2
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 63 CDTPYRTCACDVSAPTS 13
C+ PY TC C +AP+S
Sbjct: 440 CEKPYSTCDCGSAAPSS 456
>SB_2062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1136
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -3
Query: 272 TRWSSRAAARGTLGVGRQVALAPVVHVS 189
T WS+ ++ RG+ GVGR+V ++ S
Sbjct: 1014 TPWSAWSSCRGSCGVGRKVRTRRIIRQS 1041
>SB_552| Best HMM Match : Laminin_EGF (HMM E-Value=1.3e-23)
Length = 198
Score = 27.5 bits (58), Expect = 9.2
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +2
Query: 278 TGYRCEWCGTTCHAGCRALILEECN 352
+G+ C+WC + H A + CN
Sbjct: 107 SGFNCQWCVSGFHGNATAKTCQACN 131
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,192,237
Number of Sequences: 59808
Number of extensions: 510302
Number of successful extensions: 2147
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 1894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2140
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1524174750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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