Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0070
(574 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14478| Best HMM Match : DUF1168 (HMM E-Value=3) 32 0.38
SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05) 32 0.38
SB_9343| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.51
SB_39987| Best HMM Match : FtsL (HMM E-Value=0.4) 31 0.51
SB_50825| Best HMM Match : DUF1168 (HMM E-Value=4.1) 31 0.67
SB_18215| Best HMM Match : DUF1168 (HMM E-Value=3.7) 31 0.88
SB_21821| Best HMM Match : MRG (HMM E-Value=0) 30 1.2
SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 30 1.5
SB_59677| Best HMM Match : RVT_1 (HMM E-Value=2.1e-28) 29 2.0
SB_27622| Best HMM Match : Ribosomal_S25 (HMM E-Value=0) 29 2.0
SB_56336| Best HMM Match : Ag332 (HMM E-Value=5.1) 29 2.7
SB_52816| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_3323| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 29 3.6
SB_26060| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_56887| Best HMM Match : TolA (HMM E-Value=0.66) 28 4.7
SB_56146| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_47219| Best HMM Match : DUF414 (HMM E-Value=1.7) 28 6.2
SB_59217| Best HMM Match : TRAUB (HMM E-Value=0.25) 27 8.2
SB_56371| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_43151| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_3915| Best HMM Match : IF2_N (HMM E-Value=4) 27 8.2
SB_22868| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_5808| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_3573| Best HMM Match : DUF1168 (HMM E-Value=1) 27 8.2
>SB_14478| Best HMM Match : DUF1168 (HMM E-Value=3)
Length = 376
Score = 31.9 bits (69), Expect = 0.38
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = -3
Query: 227 PKQDKVFEEPSRIVSVDKATVDKVT----EPKKVIQRNIEVEPKVKDAKVSVKDIPSRP- 63
P Q K E + VS+DK VDK E + + E +P++ D VKD P +P
Sbjct: 2 PDQPKPVVESAEPVSLDKLPVDKPNEMHPEHETISATETESKPQLPDWLEQVKDEPHKPV 61
Query: 62 SISEDPKKDVSKEKLKT 12
++E + +++ KT
Sbjct: 62 DLTEGDVSEPEEKEKKT 78
Score = 30.7 bits (66), Expect = 0.88
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Frame = -3
Query: 233 MQPKQDKVFEEPSRIVSVDKATVDKV----TEPKKVIQRNIEVEPKVKDAKVSVKDIPSR 66
+ P Q K E + VS+DK VDK E + + E +P++ D VKD P +
Sbjct: 269 VMPDQPKPVVESAEPVSLDKLPVDKPDEMHPEHETISATETESKPQLPDWLEPVKDEPHK 328
Query: 65 P-SISEDPKKDVSKEKLKT 12
P +E + +++ KT
Sbjct: 329 PVDFTEGDVSEPEEKEKKT 347
>SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05)
Length = 3397
Score = 31.9 bits (69), Expect = 0.38
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Frame = -3
Query: 233 MQPKQDKVFEEPSRIVSVDKATVDKV----TEPKKVIQRNIEVEPKVKDAKVSVKDIPSR 66
+ P Q K E + VS+DK VDK E + + E +P++ D VKD P +
Sbjct: 2212 VMPDQPKPVVESAEPVSLDKLPVDKPDEMHPEHETISATETESKPQLPDWLEQVKDEPHK 2271
Query: 65 P-SISEDPKKDVSKEKLKT 12
P ++E + +++ KT
Sbjct: 2272 PVDLTEGDVSEPEEKEKKT 2290
Score = 30.7 bits (66), Expect = 0.88
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = -3
Query: 233 MQPKQDKVFEEPSRIVSVDKATVDKV----TEPKKVIQRNIEVEPKVKDAKVSVKDIPSR 66
+ P Q K E + VS+DK VDK E + + E +P++ D VKD P +
Sbjct: 1943 VMPDQPKPVVESAEPVSLDKLPVDKPDEMHPEDETISATETESKPQLPDWLEQVKDEPHK 2002
Query: 65 P 63
P
Sbjct: 2003 P 2003
Score = 30.7 bits (66), Expect = 0.88
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = -3
Query: 233 MQPKQDKVFEEPSRIVSVDKATVDKV----TEPKKVIQRNIEVEPKVKDAKVSVKDIPSR 66
+ P Q K E + VS+DK VDK E + + E +P++ D VKD P +
Sbjct: 2481 VMPDQPKPVVESAEPVSLDKLPVDKPDEMHPEDETISATETESKPQLPDWLEQVKDEPHK 2540
Query: 65 P 63
P
Sbjct: 2541 P 2541
>SB_9343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 31.5 bits (68), Expect = 0.51
Identities = 22/87 (25%), Positives = 36/87 (41%)
Frame = -3
Query: 266 STGSQAVKSKLMQPKQDKVFEEPSRIVSVDKATVDKVTEPKKVIQRNIEVEPKVKDAKVS 87
S +A K +Q + V E+ S++ +P+K I++ E K K K
Sbjct: 458 SEAERAEKLSQLQQQLISVHEQLSKLTGESVLVTKTKKKPEKKIKK--EPPAKPKPVKPP 515
Query: 86 VKDIPSRPSISEDPKKDVSKEKLKTEI 6
+ P + PKK SK K++I
Sbjct: 516 KQQATKTPKAEKPPKKSASKRSAKSKI 542
>SB_39987| Best HMM Match : FtsL (HMM E-Value=0.4)
Length = 573
Score = 31.5 bits (68), Expect = 0.51
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = -3
Query: 257 SQAVKSK-LMQPKQDKVFEEPSRIVSVDKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVK 81
++AV S+ LM+ + KV +V+ P QRN + + + + +
Sbjct: 308 TKAVPSRVLMRLRHQKVDPSQEELVAKSVTKPGTARMPSTARQRNQQTQSRATAGGIKM- 366
Query: 80 DIPSR--PSISEDPKKDVSKEKLKTE 9
D P P++ E P K +++EK+ T+
Sbjct: 367 DTPKENTPAVMEQPSKTLAREKVNTQ 392
>SB_50825| Best HMM Match : DUF1168 (HMM E-Value=4.1)
Length = 543
Score = 31.1 bits (67), Expect = 0.67
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Frame = -3
Query: 233 MQPKQDKVFEEPSRIVSVDKATVDKV----TEPKKVIQRNIEVEPKVKDAKVSVKDIPSR 66
+ P Q K E + VS+DK VDK E + + E +P++ D VKD P +
Sbjct: 268 VMPDQPKPVVESAEPVSLDKLPVDKPDEMHPEDETISATETEGKPQLPDWLEQVKDEPHK 327
Query: 65 P-SISEDPKKDVSKEKLKT 12
P +E + +E+ +T
Sbjct: 328 PVGFTEGDVSEPEEEEKQT 346
Score = 29.5 bits (63), Expect = 2.0
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Frame = -3
Query: 227 PKQDKVFEEPSRIVSVDKATVDKV----TEPKKVIQRNIEVEPKVKDAKVSVKDIPSRP- 63
P Q K E + VS+DK VDK E + + E +P++ D VK+ P +P
Sbjct: 2 PDQPKPVVESAEPVSLDKLPVDKPDEMHPEDETISATETESKPQLPDWLEQVKEEPHKPV 61
Query: 62 SISEDPKKDVSKEKLKT 12
+E + +E+ +T
Sbjct: 62 DFTEGDVSEPEEEEKQT 78
>SB_18215| Best HMM Match : DUF1168 (HMM E-Value=3.7)
Length = 338
Score = 30.7 bits (66), Expect = 0.88
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = -3
Query: 233 MQPKQDKVFEEPSRIVSVDKATVDKV----TEPKKVIQRNIEVEPKVKDAKVSVKDIPSR 66
+ P Q K E + VS+DK VDK E + + E +P++ D VKD P +
Sbjct: 241 VMPDQPKPVVESAEPVSLDKLPVDKPDEMHPEDETISATETESKPQLPDWLEQVKDEPHK 300
Query: 65 P 63
P
Sbjct: 301 P 301
>SB_21821| Best HMM Match : MRG (HMM E-Value=0)
Length = 292
Score = 30.3 bits (65), Expect = 1.2
Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 6/105 (5%)
Frame = -3
Query: 374 GQLKDP*NR*IGRYKESCKNWASRCDRSSCTRWYGSSTGSQA------VKSKLMQPKQDK 213
GQLK+ R + Y KNW S ++ ++ Q +KSK + KQ+K
Sbjct: 29 GQLKEKTARYLIHYNGWNKNWDEWVPESRVLKYNDANLQKQRELREQNLKSKKARKKQEK 88
Query: 212 VFEEPSRIVSVDKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKD 78
E +++ V T K T + + P+V D K+ + D
Sbjct: 89 SDSEKTKLEEVAGPTRRKRTRLNNTLDNDENYVPRV-DVKIVIPD 132
>SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1338
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -3
Query: 188 VSVDKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPSRPSISEDPKKDVSK 27
VS K TVD + E Q + EP++K K+ V+D P S E K +V++
Sbjct: 161 VSFPKDTVDAICEAADRKQLRAKEEPQIK-RKLEVEDGPDDQSPKESVKMEVNE 213
>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 1997
Score = 29.9 bits (64), Expect = 1.5
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Frame = -3
Query: 260 GSQAVKSKLMQPKQDKVFEEPSRIVSVDKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVK 81
G + K ++ K K+ EE + + + D + + +RN E+E + D + VK
Sbjct: 855 GKEEALRKELEEKYTKLVEEKNLLFQDFQREQDACADAE---ERNAELEGRKADLEAQVK 911
Query: 80 DIPSRPSISEDPKKDVS--KEKLKTEIT 3
D+ + E+ ++S K KL+ EI+
Sbjct: 912 DMLEQLEDEEEASAELSSVKHKLEGEIS 939
>SB_59677| Best HMM Match : RVT_1 (HMM E-Value=2.1e-28)
Length = 1159
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -3
Query: 338 RYKESCKNWASRCDRSSCTRWYGSSTGSQAVKSKLMQPKQDKVFEEP 198
R KE C W CD +C S +A+K+ + KVF +P
Sbjct: 156 RAKEKCPAWQKTCD--TCGELNHFSVACKALKASKKEDLYKKVFNDP 200
>SB_27622| Best HMM Match : Ribosomal_S25 (HMM E-Value=0)
Length = 115
Score = 29.5 bits (63), Expect = 2.0
Identities = 23/82 (28%), Positives = 42/82 (51%)
Frame = -3
Query: 260 GSQAVKSKLMQPKQDKVFEEPSRIVSVDKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVK 81
GS K+K + + KV ++ + +V DKAT DK+ K+V + + P V ++ ++
Sbjct: 21 GSGGGKAKKKKWSKGKVRDKLNNLVLFDKATYDKLY--KEVPSYRL-ITPSVVSERLKIR 77
Query: 80 DIPSRPSISEDPKKDVSKEKLK 15
+R ++ E K + KE K
Sbjct: 78 GSLARRALLELQSKGLIKEVSK 99
>SB_56336| Best HMM Match : Ag332 (HMM E-Value=5.1)
Length = 366
Score = 29.1 bits (62), Expect = 2.7
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = -3
Query: 230 QPKQDKVFEEPSRIVSVDKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPSRPSISE 51
+PKQ++ FEE V A KV P + + +PK ++ V K P + E
Sbjct: 144 EPKQEEPFEEQKEAV----AEESKVDAPVAIDTSGVYEKPK-QEQPVEEKSKQEEP-VEE 197
Query: 50 DPK-KDVSKEKLKTEIT 3
+PK K++ E+ KT T
Sbjct: 198 EPKQKELVGEEPKTRRT 214
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/72 (22%), Positives = 38/72 (52%)
Frame = -3
Query: 230 QPKQDKVFEEPSRIVSVDKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPSRPSISE 51
+PKQ++ EE + +++ ++ E + ++ +E EPK ++ V++ P + + E
Sbjct: 298 EPKQEEQVEELKQEEQIEEPKQEEPVEEEPKQEKPVEEEPKKEE---PVEEEPKQEELVE 354
Query: 50 DPKKDVSKEKLK 15
+ K+ E+ K
Sbjct: 355 EDLKEAVYEESK 366
>SB_52816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1622
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +3
Query: 96 SIFHF--WFYFNITLNYFFRLCNLVNSRFINGHNSTWFLKHLV 218
+++HF + + N L YFF C N F N S++FL H++
Sbjct: 1212 ALYHFSKFVFLNFQL-YFF--CRFSNKSFFNRWGSSFFLMHII 1251
>SB_3323| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 872
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/76 (25%), Positives = 35/76 (46%)
Frame = -3
Query: 251 AVKSKLMQPKQDKVFEEPSRIVSVDKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIP 72
A + L++ + DK EE + + A + KKVI K ++ + V++I
Sbjct: 43 ARQQMLVEKEHDKYNEEKQQANQSEMALSEVKDMHKKVIDDLNHNRKKARELRTEVENIA 102
Query: 71 SRPSISEDPKKDVSKE 24
+R E+ K+DV +
Sbjct: 103 ARLHYMEEAKEDVRSD 118
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +3
Query: 252 LAPCTTAIPASTGAAITATSPIFAAFFISTNLP 350
+AP TTA P +T A T TSP A +T +P
Sbjct: 468 MAPETTATPVTTMAPDTTTSPATTAALETTMVP 500
>SB_26060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2671
Score = 28.3 bits (60), Expect = 4.7
Identities = 25/94 (26%), Positives = 40/94 (42%)
Frame = -3
Query: 308 SRCDRSSCTRWYGSSTGSQAVKSKLMQPKQDKVFEEPSRIVSVDKATVDKVTEPKKVIQR 129
+R D S +W G+ S+ +K + + K+ + I + T DKVT K
Sbjct: 1517 TRSDVSGYKKWEGNQ--SEQIKYRRVARAVKKIGVDDDVISFSNSTTPDKVTSNK----- 1569
Query: 128 NIEVEPKVKDAKVSVKDIPSRPSISEDPKKDVSK 27
++ + K A + S + S PKK VSK
Sbjct: 1570 -VDKQHKSSQAPLDSSSSSSCSTSSTTPKKSVSK 1602
>SB_56887| Best HMM Match : TolA (HMM E-Value=0.66)
Length = 404
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = -3
Query: 167 VDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPSRPSISEDPKKDVSKEKLKTEIT 3
++ TEPK+V+Q ++++ + + D P SE+P V + +L +T
Sbjct: 289 IEDATEPKEVVQDTVDIK-----EEEDIPDETEGPEKSEEPPVSVQERELSRIVT 338
>SB_56146| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -3
Query: 326 SCKNWASRCDRSSCTRW-YGSSTGSQAVKSKLMQ 228
+C+ W S CD C RW + S TG ++M+
Sbjct: 55 NCQYWGSSCD-GVCNRWGHSSHTGEWRAYHRIMR 87
>SB_47219| Best HMM Match : DUF414 (HMM E-Value=1.7)
Length = 704
Score = 27.9 bits (59), Expect = 6.2
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = -3
Query: 239 KLMQPKQDKVFEEPSRIVSVDKAT-VDKVTEPKKVIQRNIEVEP---KVKDAKVSVKDIP 72
++M+ ++ + E V A+ D+ E KK ++ + EP K +D+K S+K P
Sbjct: 606 RMMEDRKKQTDETAVESPDVKTASEADQPVEAKKPADKSAKEEPKDAKAEDSKESLKSKP 665
Query: 71 SRPSISEDPKKDVSKE 24
+ S + PK +K+
Sbjct: 666 FQLSKAGQPKATQAKQ 681
>SB_59217| Best HMM Match : TRAUB (HMM E-Value=0.25)
Length = 626
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 200 PSRIVSVDKATVDKVTEPKKVIQRNIEVE 114
PS +V VDK T PKK ++ EVE
Sbjct: 22 PSSVVGVDKGNKPVSTSPKKTVRTVKEVE 50
>SB_56371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1035
Score = 27.5 bits (58), Expect = 8.2
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = -3
Query: 254 QAVKSKLMQPKQ---DKVFEEPSRIVSVDKATVDKVTEPKKVIQRNIEVEPKVKDAKVSV 84
Q V+ ++ Q KQ D+V + R+ K T +V + ++ QR V +VK K V
Sbjct: 437 QRVRDRVKQTKQRVRDRVKQTKQRVRDKAKQTKQRVRD--RIKQRKQRVRDRVKQRKQRV 494
Query: 83 KD 78
+D
Sbjct: 495 RD 496
>SB_43151| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1719
Score = 27.5 bits (58), Expect = 8.2
Identities = 20/102 (19%), Positives = 41/102 (40%), Gaps = 2/102 (1%)
Frame = -3
Query: 332 KESC--KNWASRCDRSSCTRWYGSSTGSQAVKSKLMQPKQDKVFEEPSRIVSVDKATVDK 159
K+SC +N C + +C W G KS ++PK + + + V + K + +
Sbjct: 1151 KQSCTDRNVKRLCPKKNCD-WVGVKLERHLEKSHKIEPKSHVMAKLRGKSVVLSKKQLKQ 1209
Query: 158 VTEPKKVIQRNIEVEPKVKDAKVSVKDIPSRPSISEDPKKDV 33
E +++ K + A + D+ + + KK +
Sbjct: 1210 AQEESSEDKKSHTQTTKKRPALLRTSDVAISVGLVQHKKKKI 1251
>SB_3915| Best HMM Match : IF2_N (HMM E-Value=4)
Length = 220
Score = 27.5 bits (58), Expect = 8.2
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Frame = -3
Query: 266 STGSQAVKSKLMQPKQDK--VFEEPSRIVSVDKATVDKVTEPKKVIQRNIEVEPKVKDAK 93
+ G + K QPK + V EE +++V K ++ K ++ +V PK ++ K
Sbjct: 112 AVGKIDLNPKKQQPKLETPPVVEEKAKVVVEAKEEKPEIIAAPK-LEVTEKVTPKAEEPK 170
Query: 92 VSVKDIPSRPSISEDPKKDVSKE 24
V + + PK ++ K+
Sbjct: 171 VESSTVEKVEVVKSQPKVEILKK 193
>SB_22868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = -3
Query: 326 SCKNWASRCDR-SSCTRW-YGSSTGSQAVKSKLMQ 228
+C+ W S CD + C RW + S TG ++M+
Sbjct: 320 NCQYWGSSCDGVNYCNRWGHSSYTGEWRAHHRIMR 354
>SB_5808| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = -3
Query: 152 EPKKVIQRNIEVEPKVKDAKVSVKDIPSRPSISEDPKKDVSKEKLKTE 9
+ KK + ++E K ++ K + I + S + + KK+ KE+ K+E
Sbjct: 262 QSKKTEAKQEKIEKKSQEQKPKKEKIHEKESATSNEKKEQEKERKKSE 309
>SB_3573| Best HMM Match : DUF1168 (HMM E-Value=1)
Length = 782
Score = 27.5 bits (58), Expect = 8.2
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = -3
Query: 233 MQPKQDKVFEEPSRIVSVDKATVDKVTE--PKKVIQRNIEVEPK--VKDAKVSVKDIPSR 66
+ P Q K E + VS+DK VDK E P+ E E K + D VKD P +
Sbjct: 474 VMPDQPKPVVESAEPVSLDKLPVDKPDEMHPEDETISATETESKQQLPDWLEPVKDEPHK 533
Query: 65 P 63
P
Sbjct: 534 P 534
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,606,884
Number of Sequences: 59808
Number of extensions: 307156
Number of successful extensions: 1160
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1361520496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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