Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0004
(637 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 151 3e-37
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 147 8e-36
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 147 8e-36
SB_56| Best HMM Match : Actin (HMM E-Value=0) 145 2e-35
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 144 5e-35
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 128 3e-30
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_54| Best HMM Match : Actin (HMM E-Value=0) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 52 4e-07
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 47 1e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 41 0.001
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 36 0.021
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.59
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.59
SB_12978| Best HMM Match : Flavodoxin_1 (HMM E-Value=3.8e-24) 31 0.78
SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7) 31 1.0
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 30 1.4
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 1.4
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_32977| Best HMM Match : Gp-FAR-1 (HMM E-Value=2.5) 30 1.8
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 30 1.8
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 30 1.8
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 30 1.8
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 30 1.8
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_35162| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 29 2.4
SB_33615| Best HMM Match : PA (HMM E-Value=9e-16) 29 3.2
SB_57724| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 4.2
SB_24277| Best HMM Match : EGF (HMM E-Value=2.4e-06) 29 4.2
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 29 4.2
SB_22840| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 4.2
SB_35006| Best HMM Match : PT (HMM E-Value=3.4) 28 5.5
SB_34469| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_30534| Best HMM Match : EGF (HMM E-Value=0.12) 28 5.5
SB_25976| Best HMM Match : RVT_1 (HMM E-Value=5.3e-22) 28 5.5
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_56900| Best HMM Match : I-set (HMM E-Value=8e-10) 28 7.3
SB_22098| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 27 9.7
SB_24276| Best HMM Match : Extensin_2 (HMM E-Value=2.1e-05) 27 9.7
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 27 9.7
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 27 9.7
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 27 9.7
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 27 9.7
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 27 9.7
SB_3036| Best HMM Match : Metallothionein (HMM E-Value=0.81) 27 9.7
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 151 bits (367), Expect = 3e-37
Identities = 78/131 (59%), Positives = 83/131 (63%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 245
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKRVXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSCLLRLPSTPRATERKM 425
SKR + P L P P+A KM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 426 TQIMFETFNTP 458
TQIMFETFN+P
Sbjct: 121 TQIMFETFNSP 131
Score = 123 bits (296), Expect = 1e-28
Identities = 53/58 (91%), Positives = 55/58 (94%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKGNREK 421
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPK NREK
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 147 bits (356), Expect = 8e-36
Identities = 77/131 (58%), Positives = 82/131 (62%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 245
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKRVXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSCLLRLPSTPRATERKM 425
SKR + P L P P+A KM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 426 TQIMFETFNTP 458
TQIMFETFN+P
Sbjct: 121 TQIMFETFNSP 131
Score = 123 bits (296), Expect = 1e-28
Identities = 53/58 (91%), Positives = 55/58 (94%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKGNREK 421
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPK NREK
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 147 bits (356), Expect = 8e-36
Identities = 75/131 (57%), Positives = 82/131 (62%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 245
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKRVXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSCLLRLPSTPRATERKM 425
SKR + P L P P+A KM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 426 TQIMFETFNTP 458
TQIMFETFN+P
Sbjct: 121 TQIMFETFNSP 131
Score = 123 bits (296), Expect = 1e-28
Identities = 53/58 (91%), Positives = 55/58 (94%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKGNREK 421
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPK NREK
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 145 bits (352), Expect = 2e-35
Identities = 76/129 (58%), Positives = 81/129 (62%)
Frame = +3
Query: 72 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 251
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 252 RVXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSCLLRLPSTPRATERKMTQ 431
R + P L P P+A KMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 432 IMFETFNTP 458
IMFETFN+P
Sbjct: 122 IMFETFNSP 130
Score = 123 bits (296), Expect = 1e-28
Identities = 53/58 (91%), Positives = 55/58 (94%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKGNREK 421
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPK NREK
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 118
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 144 bits (349), Expect = 5e-35
Identities = 75/129 (58%), Positives = 81/129 (62%)
Frame = +3
Query: 72 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 251
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 252 RVXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSCLLRLPSTPRATERKMTQ 431
R + P L P P+A KMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 432 IMFETFNTP 458
IMFETFN+P
Sbjct: 122 IMFETFNSP 130
Score = 123 bits (296), Expect = 1e-28
Identities = 53/58 (91%), Positives = 55/58 (94%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKGNREK 421
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPK NREK
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 118
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 128 bits (310), Expect = 3e-30
Identities = 58/61 (95%), Positives = 61/61 (100%)
Frame = +3
Query: 72 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 251
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 252 R 254
R
Sbjct: 62 R 62
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTF 337
++ ILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 63.7 bits (148), Expect = 1e-10
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Frame = +2
Query: 242 TEQKSILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEASLNPKGNRE 418
++ + +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE LNP NRE
Sbjct: 62 SQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNRE 121
Query: 419 K 421
K
Sbjct: 122 K 122
Score = 59.7 bits (138), Expect = 2e-09
Identities = 43/139 (30%), Positives = 61/139 (43%), Gaps = 3/139 (2%)
Frame = +3
Query: 84 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRV 257
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 258 XXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVS-PPRNTQSCLLRLPSTPRATERKMTQI 434
+ S ++ PRNT+ L P P KM ++
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126
Query: 435 MFETFNTPRHVRLAFKPVL 491
MFE + V +A + VL
Sbjct: 127 MFENYQF-EGVYIAIQAVL 144
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 75 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 191
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 90 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 191
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
Score = 47.6 bits (108), Expect = 8e-06
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = +2
Query: 317 KIWHHTFYNELRVAPEEHPVLLTEASLNPKGNREK 421
K+W H F ++LRV E+ PVLLTEA LNPK NRE+
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRER 2163
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 381 LLRLPSTPRATERKMTQIMFETFNTP 458
L P P+ +M Q+MFE+FN P
Sbjct: 2150 LTEAPLNPKMNRERMVQLMFESFNVP 2175
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Frame = +3
Query: 60 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 230
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 231 GDEAQSK 251
GD A +K
Sbjct: 753 GDAAVAK 759
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.8 bits (106), Expect = 1e-05
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +2
Query: 269 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASL 397
K+PI H IV +WD ME+ W + LR PE+H LL +L
Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLLAVLAL 341
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -3
Query: 188 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 72
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +2
Query: 275 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKGNREK 421
PI+ G++ +WD EKI + + ++ HP+L++EA+ N + REK
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREK 51
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 36.3 bits (80), Expect = 0.021
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 365 EHPVLLTEASLNPKGNREK 421
+HPVLLTEA LNP+ NREK
Sbjct: 126 QHPVLLTEAPLNPRRNREK 144
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +3
Query: 381 LLRLPSTPRATERKMTQIMFETFNTP 458
L P PR K ++ FETFN P
Sbjct: 131 LTEAPLNPRRNREKAAEVFFETFNVP 156
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 32.7 bits (71), Expect = 0.26
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = +2
Query: 191 GRDGRYGTEGLLCRR*-GTEQKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 361
GR G + GL G+ + L+ P + +VT+++ E++ H F + P
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164
Query: 362 EEHPVLLTEASLNPKGNREKDDPDH 436
HPV++TE NP R+ + +H
Sbjct: 165 VNHPVIMTEPVCNPNYCRQCEHFNH 189
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.59
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 163 GNTARGASSPAKPALHIPEPLSTT 92
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.59
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 163 GNTARGASSPAKPALHIPEPLSTT 92
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_12978| Best HMM Match : Flavodoxin_1 (HMM E-Value=3.8e-24)
Length = 1592
Score = 31.1 bits (67), Expect = 0.78
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -1
Query: 400 VEGSLSKQDWVFLGGDTQLIVEGMMPNLLHVI 305
+ SL+KQ+W + D Q+IVEG M N ++I
Sbjct: 1329 IRQSLTKQEWRWQMDDPQMIVEGAMQNHYNMI 1360
>SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7)
Length = 186
Score = 30.7 bits (66), Expect = 1.0
Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = -2
Query: 369 CSSGATRSSL*KV*CQIFSMSSQLVTIPCSMG--YLRVRILFCSVPHLLHKSPSVPYRPS 196
CS + + C + ++V CS Y+ V + CS + H+ PS
Sbjct: 88 CSPSRAHVDVFPITCSCRCVPHRMVMSMCSPSRVYVDVSPIVCSCRCVPHRVLMSMCSPS 147
Query: 195 RPDGGAFPRSRGTRREEHHLLRNRPCTYRSH 103
R D FP + R HH+L + + R+H
Sbjct: 148 RADVDVFPITCSRRCVFHHVLMSMCSSSRAH 178
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 163 GNTARGASSPAKPALHIPEPLSTT 92
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -3
Query: 245 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 111
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 216 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 254 SILTLKYPIEHGIVTNWDDMEKIWHHTFYNE 346
S L P + G + NWD ++IW +TF E
Sbjct: 285 SALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 78 EVAALVVDNGSGMCKAGFAGDDAPRAV 158
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -3
Query: 245 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 111
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 411 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_32977| Best HMM Match : Gp-FAR-1 (HMM E-Value=2.5)
Length = 402
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 461 PCTFGIQARASRCTPSVRTTRYSCWDFPGTGVFPQP-VPHFTERDTPLFPH 610
PCT + R++ CTP + SC P T P PH +R T PH
Sbjct: 316 PCTPHTKDRSTPCTPHTKDRSTSC--TPHTKDRSTPCTPHTKDRSTSCTPH 364
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 29.9 bits (64), Expect = 1.8
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = -3
Query: 251 FALCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQR 87
FA CL + V+LSH + H L A +HG R+ SCET L H A + +
Sbjct: 462 FATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKH 520
Query: 86 GNFFVAHLELVK 51
G V L+ K
Sbjct: 521 GQVDVLLLDFQK 532
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -3
Query: 245 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 111
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 274 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -3
Query: 245 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 111
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 252 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -3
Query: 245 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 111
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -3
Query: 245 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 111
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -3
Query: 245 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 111
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 128 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_35162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 317
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = -3
Query: 527 NTGWYGRKAYSEKHGLECQT--YMAGRVKCFEHDL 429
N W+ + +EK L C+T Y+A R + HDL
Sbjct: 32 NKNWFDLECDTEKENLRCETGLYLAQRCYLYVHDL 66
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -3
Query: 245 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 111
+C ++LSH + H M D +HG RS SCET L T
Sbjct: 176 ICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_33615| Best HMM Match : PA (HMM E-Value=9e-16)
Length = 629
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 562 WKNTGSREVPAR-IPGGTDGRRTARSTGLNAKRTWRGVLNVS 440
+K +G +PA+ I G + +R GL + WRG LN+S
Sbjct: 169 YKGSGLPSIPAQPISYGEAAQILSRMGGLAVPKEWRGSLNIS 210
>SB_57724| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 3804
Score = 28.7 bits (61), Expect = 4.2
Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 9/70 (12%)
Frame = -1
Query: 610 VGEKWG-IPFGKMGH-GLWKNTGSREVP------ARIPGGTDGRRTA-RSTGLNAKRTWR 458
V + WG G++ H G W++TG R +P A I G RR A R L A R
Sbjct: 2705 VDKLWGNCAGGRVEHLGCWRDTGRRAIPQLDGKFALIRGNYQRRRNAIRRCALVAARLGY 2764
Query: 457 GVLNVSNMIW 428
V V N W
Sbjct: 2765 RVFGVQNGGW 2774
Score = 27.5 bits (58), Expect = 9.7
Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 9/70 (12%)
Frame = -1
Query: 610 VGEKWG-IPFGKMGH-GLWKNTGSREVP------ARIPGGTDGRRTA-RSTGLNAKRTWR 458
V + WG G + H G W++TG R +P A I G RR A R L A R
Sbjct: 352 VDKLWGNCAGGAVEHLGCWRDTGRRAIPQLDGKFALIRGNYQRRRNAIRRCALVAARLGY 411
Query: 457 GVLNVSNMIW 428
V V N W
Sbjct: 412 RVFGVQNGGW 421
>SB_24277| Best HMM Match : EGF (HMM E-Value=2.4e-06)
Length = 433
Score = 28.7 bits (61), Expect = 4.2
Identities = 25/93 (26%), Positives = 36/93 (38%), Gaps = 6/93 (6%)
Frame = +3
Query: 354 SPPRNTQSCLLRLPSTPR----ATERKMTQIMFETFNTPRHVRLAFK--PVLLAVRLPSV 515
S P + + P+ P+ +T IM T N P+ + + P + LP+
Sbjct: 274 STPNPPKGIMGSTPNPPKGIMGSTPNPPKGIMGSTPNPPKGIMGSTPNPPKRIMGSLPNP 333
Query: 516 PPGIRAGTSREPVFFHNPCPILPKGIPHFSPTP 614
P GI T P P PKGI +P P
Sbjct: 334 PKGIMGSTPNPPKEIMGSTPNPPKGIMGSTPNP 366
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +3
Query: 504 LPSVPPGIRAGTSREPVFFHNPCPILPKGIPHFSPTP 614
LP+ P GI T P P PKGI +P P
Sbjct: 220 LPNPPKGIMGSTPNPPKGIMGSTPNPPKGIMGSTPNP 256
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +3
Query: 504 LPSVPPGIRAGTSREPVFFHNPCPILPKGIPHFSPTP 614
LP+ P GI T P P PKGI +P P
Sbjct: 396 LPNPPKGIMGSTPNPPKGIMGSTPNPPKGIMGSTPNP 432
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 158 VPLDRGKAPPSGRDGRYGTEGLLCRR*GTEQKSILTLKYPIEHGIVTNW--DDMEKIWHH 331
V L + +GR+ G+ +CR+ + ++TL + I G+ + D EK+W+H
Sbjct: 441 VTLSQNVVSVTGREESGGSGTQVCRK----KAPLITLSHVIRMGLALSLVSDVKEKVWYH 496
Query: 332 TFYN 343
T N
Sbjct: 497 TCPN 500
>SB_22840| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 4002
Score = 28.7 bits (61), Expect = 4.2
Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 9/70 (12%)
Frame = -1
Query: 610 VGEKWG-IPFGKMGH-GLWKNTGSREVP------ARIPGGTDGRRTA-RSTGLNAKRTWR 458
V + WG G++ H G W++TG R +P A I G RR A R L A R
Sbjct: 802 VDKLWGNCAGGRVQHLGCWRDTGRRAIPQLDGKFALIRGNYQRRRNAIRRCALVAARLGY 861
Query: 457 GVLNVSNMIW 428
V V N W
Sbjct: 862 RVFGVQNGGW 871
>SB_35006| Best HMM Match : PT (HMM E-Value=3.4)
Length = 325
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = -1
Query: 283 FDGVFEGQDTLLLCASSPT*ESFCPIPTITP*WRGLPT 170
+DGV + + LLL +SSP S PI TP +GL T
Sbjct: 273 YDGVIDIKLNLLLLSSSPMFLSAVPIAPHTPTLQGLHT 310
>SB_34469| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 444
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = -3
Query: 629 NRQGNGRGGKVGYPFR*NGARVVEKHRFPGSPSTNTGWYGRKAYSEK 489
NR G GGKV Y F E +TNT W+ K SEK
Sbjct: 215 NRATGGVGGKVSYKFN------YESSSTTTDTNTNTQWFIDKVMSEK 255
>SB_30534| Best HMM Match : EGF (HMM E-Value=0.12)
Length = 521
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 504 LPSVPPGIRAGTSREPVFFHNPCPILPKG 590
LP+ P I G S +PV +NP P++ G
Sbjct: 442 LPASKPIIAVGVSGDPVNGNNPSPVIANG 470
>SB_25976| Best HMM Match : RVT_1 (HMM E-Value=5.3e-22)
Length = 1421
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +3
Query: 333 PSTMSCVSPPRNTQSCLLRLPSTPRATERKMTQIMFETFNTPRHVRLA 476
PS++S SPP N+ C+ + ++ + + + TF RH A
Sbjct: 598 PSSLSSPSPPPNSPFCIFDYETIGHSSYKHASAVTMGTFPNYRHAARA 645
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 163 GNTARGASSPAKPALHIPEPLSTT 92
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 163 GNTARGASSPAKPALHIPEPLSTT 92
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_56900| Best HMM Match : I-set (HMM E-Value=8e-10)
Length = 968
Score = 27.9 bits (59), Expect = 7.3
Identities = 24/81 (29%), Positives = 31/81 (38%), Gaps = 2/81 (2%)
Frame = +3
Query: 351 VSPPRNTQSCLLRLPSTPRATERKMTQIMFETFNTP-RHVRLAFKPVLLAVRLPSVP-PG 524
V+P +TQ P TP T+R+ T + TP R V PS P P
Sbjct: 764 VNPRLHTQYTHTYTPGTPTPTQREYTHAYTPSTPTPTRPVHPRLHTEYTHAYTPSTPSPT 823
Query: 525 IRAGTSREPVFFHNPCPILPK 587
R T + H PI P+
Sbjct: 824 HRVHTRLHTKYTHAYTPIHPR 844
>SB_22098| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 976
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +3
Query: 399 TPRATERKMTQIMFETFNTPRHVRLAFKPVLLAVRLPSVPP 521
+P++T +MF R A KP + V P++PP
Sbjct: 359 SPKSTAAMARDVMFGKMTPERFAAKACKPTEMRVTRPNIPP 399
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 245 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 111
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 245 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288
>SB_24276| Best HMM Match : Extensin_2 (HMM E-Value=2.1e-05)
Length = 449
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +3
Query: 504 LPSVPPGIRAGTSREPVFFHNPCPILPKGIPHFSPTP 614
LP+ P GI T P P PKGI +P P
Sbjct: 202 LPNPPKGIMGSTPNPPKGIMGSTPNPPKGIMGSTPNP 238
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -1
Query: 178 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 68
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 245 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 111
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 106 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 245 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 111
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 1644 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 245 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 111
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 672 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 245 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 111
LC + ++LSH + H L +HG R +SCET L T
Sbjct: 857 LCCKTMEHIVLSHLNKH-LSRFNILSNAQHGFRQGLSCETQLVLT 900
>SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -2
Query: 234 LLHKSPSVPYRPS--RPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPT 88
LL +S P +P+ RP GGA P++ ++ + N+ T+ PT
Sbjct: 92 LLDESTEAPPQPATIRPQGGALPQTPVKGKQNKRVSDNKEFTHAMQARRPT 142
>SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 27.5 bits (58), Expect = 9.7
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = -2
Query: 240 PHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPTRQLLRR 70
P L +P + RPS + S + LL RP TYR+ LP+ LL +
Sbjct: 131 PLYLPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPLLTK 187
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 245 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 111
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 227 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 245 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 111
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 1082 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 245 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 111
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 25 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 245 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 111
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 106 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_3036| Best HMM Match : Metallothionein (HMM E-Value=0.81)
Length = 597
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 559 KNTGSREVPARIPGGT--DGRRTARSTGLNAKRTWRGVLNVSNM 434
++ +R +P G + + R+T+ S G+N W GV+ +N+
Sbjct: 505 RSARARPLPTHRSGNSRPNSRKTSNSEGVNTVNNWTGVVFCNNL 548
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,639,037
Number of Sequences: 59808
Number of extensions: 639465
Number of successful extensions: 2116
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 1817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2098
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1596754500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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