Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0089
(681 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53000| Best HMM Match : Transposase_22 (HMM E-Value=0.026) 71 7e-13
SB_57207| Best HMM Match : Transposase_22 (HMM E-Value=0.17) 70 2e-12
SB_6319| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_45474| Best HMM Match : PilO (HMM E-Value=1.9) 46 3e-05
SB_7565| Best HMM Match : Shugoshin_N (HMM E-Value=1.3) 46 3e-05
SB_56906| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_54477| Best HMM Match : Shugoshin_N (HMM E-Value=1.3) 46 3e-05
SB_53647| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_32928| Best HMM Match : PilO (HMM E-Value=1.9) 46 3e-05
SB_54524| Best HMM Match : Shugoshin_N (HMM E-Value=1.3) 46 4e-05
SB_27138| Best HMM Match : Ebp2 (HMM E-Value=1.8) 36 0.001
SB_22222| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_1103| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_44235| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_49526| Best HMM Match : HSBP1 (HMM E-Value=0.28) 38 0.010
SB_58227| Best HMM Match : HSBP1 (HMM E-Value=0.28) 38 0.010
SB_52992| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_13719| Best HMM Match : HSBP1 (HMM E-Value=0.28) 37 0.017
SB_2790| Best HMM Match : HSBP1 (HMM E-Value=0.15) 37 0.017
SB_20682| Best HMM Match : HWE_HK (HMM E-Value=0.35) 36 0.023
SB_41731| Best HMM Match : bZIP_1 (HMM E-Value=0.014) 36 0.030
SB_42627| Best HMM Match : DUF164 (HMM E-Value=0.33) 36 0.040
SB_32382| Best HMM Match : TerB (HMM E-Value=3.7) 36 0.040
SB_3042| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.040
SB_26976| Best HMM Match : Exo_endo_phos (HMM E-Value=5.3) 36 0.040
SB_13857| Best HMM Match : Thymosin (HMM E-Value=1.8) 36 0.040
SB_15468| Best HMM Match : DNA_RNApol_7kD (HMM E-Value=7.4) 34 0.093
SB_25470| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_56575| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_45202| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_54016| Best HMM Match : Dehydratase_SU (HMM E-Value=1.6) 32 0.37
SB_53689| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_23626| Best HMM Match : WXG100 (HMM E-Value=2) 32 0.37
SB_22823| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_5091| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_58004| Best HMM Match : WXG100 (HMM E-Value=2) 32 0.37
SB_57509| Best HMM Match : WXG100 (HMM E-Value=2) 32 0.37
SB_46219| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_34971| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_23474| Best HMM Match : Exo_endo_phos (HMM E-Value=2.4e-12) 32 0.37
SB_18197| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_15583| Best HMM Match : WXG100 (HMM E-Value=2) 32 0.37
SB_13485| Best HMM Match : HSBP1 (HMM E-Value=1.4) 31 0.65
SB_37565| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.86
SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_55287| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_51572| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_39979| Best HMM Match : RVT_1 (HMM E-Value=4.6e-12) 30 1.5
SB_936| Best HMM Match : DUF1127 (HMM E-Value=3.2) 30 1.5
SB_27389| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_651| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_39791| Best HMM Match : RVT_1 (HMM E-Value=0.083) 29 2.6
SB_18579| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_43059| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_27198| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_19857| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_56697| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_26758| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-40) 29 3.5
SB_43555| Best HMM Match : Shugoshin_N (HMM E-Value=2.7) 29 4.6
SB_23221| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_56379| Best HMM Match : Shugoshin_N (HMM E-Value=2.7) 29 4.6
SB_37800| Best HMM Match : Shugoshin_N (HMM E-Value=2.7) 29 4.6
SB_11157| Best HMM Match : NUC173 (HMM E-Value=9.2e-39) 29 4.6
SB_39850| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_37641| Best HMM Match : WXG100 (HMM E-Value=2) 28 6.1
SB_35310| Best HMM Match : Cadherin (HMM E-Value=5.9e-23) 28 6.1
SB_6200| Best HMM Match : Laminin_EGF (HMM E-Value=0) 28 6.1
SB_56580| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_48988| Best HMM Match : DUF1127 (HMM E-Value=1.5) 28 8.0
>SB_53000| Best HMM Match : Transposase_22 (HMM E-Value=0.026)
Length = 301
Score = 71.3 bits (167), Expect = 7e-13
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 3/129 (2%)
Frame = -3
Query: 595 DRLEMHSRRKILLIHGVPE-QQKEDTLATVVETIVSKLKLMDFNTSNISRCHRMGKTFTP 419
D LE +SRR + I G+P+ ++KEDT ++ETI +K+ ++ ++I R HR+G+
Sbjct: 146 DDLEQYSRRNNIRIDGIPQTEEKEDTDRLIIETIKAKIGIV-IAPADICRSHRVGQA-KG 203
Query: 418 ERSRPILLKLCDMNLRSKVWAAKTSL--KGSGITLSEFLTKRRHDIFMSARQRFGVTRCW 245
R I+ K N+++K+ K SL K + ++E LTK R D + + + + W
Sbjct: 204 SNPRQIICKFVRHNIKAKILKEKKSLREKKEKLRVNEDLTKGRLDAIKAINSKLDIYKLW 263
Query: 244 TRDGCVYVQ 218
T DG ++V+
Sbjct: 264 TIDGTIHVR 272
>SB_57207| Best HMM Match : Transposase_22 (HMM E-Value=0.17)
Length = 262
Score = 70.1 bits (164), Expect = 2e-12
Identities = 45/131 (34%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Frame = -3
Query: 595 DRLEMHSRRKILLIHGVPE-QQKEDTLATVVETIVSKLKLMDFNTSNISRCHRMG--KTF 425
D LE +SRR + I G+P+ ++KEDT ++ETI +K+ ++ ++I R HR+G K
Sbjct: 107 DGLEQYSRRNNIRIDGIPQTEEKEDTDRLIIETIKAKIGIV-IAPADIWRSHRVGHSKGS 165
Query: 424 TPERSRPILLKLCDMNLRSKVWAAKTSL--KGSGITLSEFLTKRRHDIFMSARQRFGVTR 251
TP R I+ K N+++K+ K SL K + ++E LTK R D + + + +
Sbjct: 166 TP---RQIICKFVRHNIKAKILKEKKSLREKKDKLRVNEDLTKGRLDAIKAINSKLDIYK 222
Query: 250 CWTRDGCVYVQ 218
WT DG ++V+
Sbjct: 223 LWTIDGTIHVR 233
>SB_6319| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 49.2 bits (112), Expect = 3e-06
Identities = 29/96 (30%), Positives = 49/96 (51%)
Frame = -3
Query: 589 LEMHSRRKILLIHGVPEQQKEDTLATVVETIVSKLKLMDFNTSNISRCHRMGKTFTPERS 410
L S R LL+ +PE+ E+ +V T+ ++KL + + + R HR+G + T S
Sbjct: 24 LRTRSMRNNLLLFNIPEKDGENPHEVLVNTMKVEMKLQNVDAVELERVHRIGNSKT--SS 81
Query: 409 RPILLKLCDMNLRSKVWAAKTSLKGSGITLSEFLTK 302
RP++ K R +V +LKG+ I ++E K
Sbjct: 82 RPLVAKFLRFQDRERVGKNAHALKGTNIGIAEQFPK 117
>SB_45474| Best HMM Match : PilO (HMM E-Value=1.9)
Length = 228
Score = 46.0 bits (104), Expect = 3e-05
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
Frame = -3
Query: 598 NDRLEMHSRRKILLIHGVPEQQKEDTLATVVETIVSKLKLMDFNTSNISRCHRM-GKTFT 422
ND LE + RR+ L I G+PE + EDT + + V+ L + + +IS HR+ K T
Sbjct: 73 ND-LEQYGRRECLEIRGIPEVKGEDT--SQIACQVANLIGVKLSRQDISTSHRIKPKNST 129
Query: 421 PERSRPILLKLCDMNLRSKVWAAKTSL--------------KGSGITLSEFLTKRRHDIF 284
+ I++K + R + + A+ L K + I LSE LT+R +F
Sbjct: 130 AKFPPSIIVKFTSRDKRDETYKARGRLRELSTHNVPGLDRFKSNSIYLSESLTQRNKALF 189
Query: 283 MSA---RQRFGVTRCWTRDGCVYVQGSD 209
SA R++ WT +G +Y++ ++
Sbjct: 190 KSALEDRKQMKYDFIWTANGNIYLRKNE 217
>SB_7565| Best HMM Match : Shugoshin_N (HMM E-Value=1.3)
Length = 267
Score = 46.0 bits (104), Expect = 3e-05
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
Frame = -3
Query: 598 NDRLEMHSRRKILLIHGVPEQQKEDTLATVVETIVSKLKLMDFNTSNISRCHRM-GKTFT 422
ND LE + RR+ L I G+PE + EDT + + V+ L + + +IS HR+ K T
Sbjct: 73 ND-LEQYGRRECLEIRGIPEVKGEDT--SQIACQVANLIGVKLSRQDISTSHRIKPKNST 129
Query: 421 PERSRPILLKLCDMNLRSKVWAAKTSL--------------KGSGITLSEFLTKRRHDIF 284
+ I++K + R + + A+ L K + I LSE LT+R +F
Sbjct: 130 AKFPPSIIVKFTSRDKRDETYKARGRLRELSTHNVPGLDRFKSNSIYLSESLTQRNKALF 189
Query: 283 MSA---RQRFGVTRCWTRDGCVYVQGSD 209
SA R++ WT +G +Y++ ++
Sbjct: 190 KSALEDRKQMKYDFIWTANGNIYLRKNE 217
>SB_56906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Frame = -3
Query: 595 DRLEMHSRRKILLIHGVPE-QQKEDTLATVVETIVSKLKLMDFNTSNISRCHRMGKTFTP 419
D LE +SRR + I G+P+ ++KEDT ++ETI +K+ ++ ++I R HR +T+T
Sbjct: 188 DDLEQYSRRNNIRIDGIPQTEEKEDTDRLIIETIKTKIGVV-IAPADIWRSHRFIRTYTM 246
Query: 418 ERS 410
E S
Sbjct: 247 ETS 249
>SB_54477| Best HMM Match : Shugoshin_N (HMM E-Value=1.3)
Length = 267
Score = 46.0 bits (104), Expect = 3e-05
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
Frame = -3
Query: 598 NDRLEMHSRRKILLIHGVPEQQKEDTLATVVETIVSKLKLMDFNTSNISRCHRM-GKTFT 422
ND LE + RR+ L I G+PE + EDT + + V+ L + + +IS HR+ K T
Sbjct: 73 ND-LEQYGRRECLEIRGIPEVKGEDT--SQIACQVANLIGVKLSRQDISTSHRIKPKNST 129
Query: 421 PERSRPILLKLCDMNLRSKVWAAKTSL--------------KGSGITLSEFLTKRRHDIF 284
+ I++K + R + + A+ L K + I LSE LT+R +F
Sbjct: 130 AKFPPSIIVKFTSRDKRDETYKARGRLRELSTHNVPGLDRFKSNSIYLSESLTQRNKALF 189
Query: 283 MSA---RQRFGVTRCWTRDGCVYVQGSD 209
SA R++ WT +G +Y++ ++
Sbjct: 190 KSALEDRKQMKYDFIWTANGNIYLRKNE 217
>SB_53647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 46.0 bits (104), Expect = 3e-05
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
Frame = -3
Query: 598 NDRLEMHSRRKILLIHGVPEQQKEDTLATVVETIVSKLKLMDFNTSNISRCHRM-GKTFT 422
ND LE + RR+ L I G+PE + EDT + + V+ L + + +IS HR+ K T
Sbjct: 73 ND-LEQYGRRECLEIRGIPEVKGEDT--SQIACQVANLIGVKLSRQDISTSHRIKPKNST 129
Query: 421 PERSRPILLKLCDMNLRSKVWAAKTSL--------------KGSGITLSEFLTKRRHDIF 284
+ I++K + R + + A+ L K + I LSE LT+R +F
Sbjct: 130 AKFPPSIIVKFTSRDKRDETYKARGRLRELSTHNVPGLDRFKSNSIYLSESLTQRNKALF 189
Query: 283 MSA---RQRFGVTRCWTRDGCVYVQGSD 209
SA R++ WT +G +Y++ ++
Sbjct: 190 KSALEDRKQMKYDFIWTANGNIYLRKNE 217
>SB_32928| Best HMM Match : PilO (HMM E-Value=1.9)
Length = 228
Score = 46.0 bits (104), Expect = 3e-05
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
Frame = -3
Query: 598 NDRLEMHSRRKILLIHGVPEQQKEDTLATVVETIVSKLKLMDFNTSNISRCHRM-GKTFT 422
ND LE + RR+ L I G+PE + EDT + + V+ L + + +IS HR+ K T
Sbjct: 73 ND-LEQYGRRECLEIRGIPEVKGEDT--SQIACQVANLIGVKLSRQDISTSHRIKPKNST 129
Query: 421 PERSRPILLKLCDMNLRSKVWAAKTSL--------------KGSGITLSEFLTKRRHDIF 284
+ I++K + R + + A+ L K + I LSE LT+R +F
Sbjct: 130 AKFPPSIIVKFTSRDKRDETYKARGRLRELSTHNVPGLDRFKSNSIYLSESLTQRNKALF 189
Query: 283 MSA---RQRFGVTRCWTRDGCVYVQGSD 209
SA R++ WT +G +Y++ ++
Sbjct: 190 KSALEDRKQMKYDFIWTANGNIYLRKNE 217
>SB_54524| Best HMM Match : Shugoshin_N (HMM E-Value=1.3)
Length = 259
Score = 45.6 bits (103), Expect = 4e-05
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
Frame = -3
Query: 598 NDRLEMHSRRKILLIHGVPEQQKEDTLATVVETIVSKLKLMDFNTSNISRCHRM-GKTFT 422
ND LE + RR+ L I G+PE + EDT + + ++ L + + +IS HR+ K T
Sbjct: 73 ND-LEQYGRRECLEIRGIPEVKGEDT--SQIACQIANLIGVKLSRQDISTSHRIKPKNST 129
Query: 421 PERSRPILLKLCDMNLRSKVWAAKTSL--------------KGSGITLSEFLTKRRHDIF 284
+ I++K + R + + A+ L K + I LSE LT+R +F
Sbjct: 130 AKFPPSIIVKFTSRDKRDETYKARGRLRELSTHNVPGLDRFKSNSIYLSESLTQRNKALF 189
Query: 283 MSA---RQRFGVTRCWTRDGCVYVQGSD 209
SA R++ WT +G +Y++ ++
Sbjct: 190 KSALEDRKQMKYDFIWTANGNIYLRKNE 217
>SB_27138| Best HMM Match : Ebp2 (HMM E-Value=1.8)
Length = 841
Score = 36.3 bits (80), Expect(2) = 0.001
Identities = 19/53 (35%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = -3
Query: 586 EMHSRRKILLIHGVPE-QQKEDTLATVVETIVSKLKLMDFNTSNISRCHRMGK 431
+++SRR + I G+P+ ++KEDT + ETI +K+ ++ ++I R HR K
Sbjct: 685 DLYSRRNNIRIDGIPQTEEKEDTDRLITETIKAKIGIV-IAPADICRSHRRKK 736
Score = 23.0 bits (47), Expect(2) = 0.001
Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = -3
Query: 322 LSEFLTKRRHDIFMSARQRFGVTRCWTRDGCVYVQ-GSDGVR---HRVEVMSDLDALAKT 155
++E LTK R D + + + + WT D + V+ D + H + + DL L +
Sbjct: 741 VNEDLTKGRLDAIKAINVKLDIYKLWTIDVTIQVRLNKDKAKEIIHSLRQLKDLQQLIEK 800
Query: 154 TM 149
+
Sbjct: 801 VL 802
>SB_22222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 38.7 bits (86), Expect = 0.004
Identities = 25/101 (24%), Positives = 48/101 (47%)
Frame = -3
Query: 634 ALQTQVELISLENDRLEMHSRRKILLIHGVPEQQKEDTLATVVETIVSKLKLMDFNTSNI 455
A++ Q+ + RL+ +SRR+ L G+PE++ E + ++ ++ +L + +
Sbjct: 2 AMEEQLNEEREKRIRLDAYSRRENLNFKGIPEKEGE-SCENIIRDLLHELGFSNPQNIDF 60
Query: 454 SRCHRMGKTFTPERSRPILLKLCDMNLRSKVWAAKTSLKGS 332
HR+GK + RPI+ + R + K L GS
Sbjct: 61 HAVHRLGKPRDGGKPRPIIARFNSRQDRDLDFRKKRKLVGS 101
>SB_1103| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/77 (27%), Positives = 41/77 (53%)
Frame = -3
Query: 622 QVELISLENDRLEMHSRRKILLIHGVPEQQKEDTLATVVETIVSKLKLMDFNTSNISRCH 443
++E++ ++ LE +SRR+ + G+ E +E ++ E + + L + T I R H
Sbjct: 168 KLEVLKTKDLNLEAYSRRENFKVFGISEHGEESAEGSLREFLKTTLDYEEAETVEIQRVH 227
Query: 442 RMGKTFTPERSRPILLK 392
R+G+ + RPIL +
Sbjct: 228 RVGRK-KAQAPRPILAR 243
>SB_44235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 160
Score = 37.9 bits (84), Expect = 0.008
Identities = 22/82 (26%), Positives = 42/82 (51%)
Frame = -3
Query: 547 VPEQQKEDTLATVVETIVSKLKLMDFNTSNISRCHRMGKTFTPERSRPILLKLCDMNLRS 368
+PE+ E+ +V T++ ++KL + + + R +R+ T SRP++ K R
Sbjct: 41 IPEKNGENPHEVLVNTMIVEMKLQNVDAIELERVNRIANRKTS--SRPLVAKFLRFQDRE 98
Query: 367 KVWAAKTSLKGSGITLSEFLTK 302
+V +LKG+ I ++E K
Sbjct: 99 RVRKNAHALKGTNIGIAEQFPK 120
>SB_49526| Best HMM Match : HSBP1 (HMM E-Value=0.28)
Length = 469
Score = 37.5 bits (83), Expect = 0.010
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Frame = -3
Query: 628 QTQVELISLEN--DRLEMHSRRKILLIHGVPEQQKE---DTLATVVETIVSKLKL-MDFN 467
+T E++ +++ + LE SRR + + G+PE E D+ A V E I +KL L ++
Sbjct: 95 ETDSEVVKVKDALEYLENQSRRNNIRVSGIPESPGESWADSEAKVKEAIQTKLGLEIEIE 154
Query: 466 TSN-ISRCHRMGKTFT---PERSRPILLKLCDMNLRSKVWAAKTSLKGSGITLSEFLTK 302
+++ + R G++ T ER R I+ KL D + V K +G+ ++E L +
Sbjct: 155 SAHRVERKKAKGRSLTQSEKERPRTIVCKLKDWKTKEAVVRKARIDKPAGLYVAEDLAR 213
>SB_58227| Best HMM Match : HSBP1 (HMM E-Value=0.28)
Length = 565
Score = 37.5 bits (83), Expect = 0.010
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Frame = -3
Query: 628 QTQVELISLEN--DRLEMHSRRKILLIHGVPEQQKE---DTLATVVETIVSKLKL-MDFN 467
+T E++ +++ + LE SRR + + G+PE E D+ A V E I +KL L ++
Sbjct: 95 ETDSEVVKVKDALEYLENQSRRNNIRVSGIPESPGESWADSEAKVKEAIQTKLGLEIEIE 154
Query: 466 TSN-ISRCHRMGKTFT---PERSRPILLKLCDMNLRSKVWAAKTSLKGSGITLSEFLTK 302
+++ + R G++ T ER R I+ KL D + V K +G+ ++E L +
Sbjct: 155 SAHRVERKKAKGRSLTQSEKERPRTIVCKLKDWKTKEAVVRKARIDKPAGLYVAEDLAR 213
>SB_52992| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 516
Score = 37.1 bits (82), Expect = 0.013
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 11/120 (9%)
Frame = -3
Query: 628 QTQVELISLEN--DRLEMHSRRKILLIHGVPEQQKE---DTLATVVETIVSKLKL-MDFN 467
+T E++ +++ + LE SRR + + G+PE E D+ A V E I +KL L ++
Sbjct: 95 ETDSEVVKVKDALEYLENQSRRNNIRVSGIPESPGESWADSEAKVKEAIQTKLGLEIEIG 154
Query: 466 TSN-ISRCHRMGKTFT---PERSRPILLKLCDMNLRSKVWAAKTSL-KGSGITLSEFLTK 302
++ + R G++ T ER R I+ KL D + V KT + K +G+ ++E L +
Sbjct: 155 RAHRVERKKAKGRSLTQSEKERPRTIVCKLKDWKTKEAV-VRKTRIDKPAGLYVAEDLAR 213
>SB_13719| Best HMM Match : HSBP1 (HMM E-Value=0.28)
Length = 335
Score = 36.7 bits (81), Expect = 0.017
Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Frame = -3
Query: 628 QTQVELISLEN--DRLEMHSRRKILLIHGVPEQQKE---DTLATVVETIVSKLKL-MDFN 467
+T E++ +++ + LE SRR + + G+PE E D+ A V E I +KL L ++
Sbjct: 95 ETDSEVVKVKDALEYLENQSRRNNIRVSGIPESPGESWADSEAKVKEAIQTKLGLEIEIE 154
Query: 466 TSN-ISRCHRMGKTFT---PERSRPILLKLCDMNLRSKVWAAKTSLKGSGITLSEFLTK 302
++ + R G++ T ER R I+ KL D + V K +G+ ++E L +
Sbjct: 155 RAHRVERKKAKGRSLTQSEKERPRTIVCKLKDWKTKEAVVRKARIDKPAGLYVAEDLAR 213
>SB_2790| Best HMM Match : HSBP1 (HMM E-Value=0.15)
Length = 263
Score = 36.7 bits (81), Expect = 0.017
Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Frame = -3
Query: 628 QTQVELISLEN--DRLEMHSRRKILLIHGVPEQQKE---DTLATVVETIVSKLKL-MDFN 467
+T E++ +++ + LE SRR + + G+PE E D+ A V E I +KL L ++
Sbjct: 95 ETDSEVVKVKDALEYLENQSRRNNIRVSGIPESPGESWADSEAKVKEAIQTKLGLEIEIE 154
Query: 466 TSN-ISRCHRMGKTFT---PERSRPILLKLCDMNLRSKVWAAKTSLKGSGITLSEFLTK 302
++ + R G++ T ER R I+ KL D + V K +G+ ++E L +
Sbjct: 155 RAHRVERKKAKGRSLTQSEKERPRTIVCKLKDWKTKEAVVRKARIDKPAGLYVAEDLAR 213
>SB_20682| Best HMM Match : HWE_HK (HMM E-Value=0.35)
Length = 450
Score = 36.3 bits (80), Expect = 0.023
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Frame = -3
Query: 637 RALQTQVELISLEN--DRLEMHSRRKILLIHGVPEQQKE---DTLATVVETIVSKLKLMD 473
R L+T E++ +++ + LE SRR + + G+PE E D+ A V E I +KL L
Sbjct: 84 RKLETDSEVVKVKDALEYLENQSRRNNIRMSGIPESPGESWADSEAKVKEAIQTKLGL-- 141
Query: 472 FNTSNISRCHRMGK 431
I R HR+GK
Sbjct: 142 --EIEIERAHRVGK 153
>SB_41731| Best HMM Match : bZIP_1 (HMM E-Value=0.014)
Length = 289
Score = 35.9 bits (79), Expect = 0.030
Identities = 41/141 (29%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Frame = -3
Query: 679 EEFLAFKTFTLNALRALQ-TQVELISLEN--DRLEMHSRRKILLIHGVPEQQKE---DTL 518
+E L K T LQ +VE+ ++N + LE SRR + + G+PE E D
Sbjct: 66 KEMLDLKPITAKIKAKLQEAEVEISRVQNSLEYLENQSRRNNIRVSGIPESPGESWDDVE 125
Query: 517 ATVVETIVSKLKLMDFNTSNISRCHRM-----------GKTFTPERSRPILLKLCDMNLR 371
A V E I L L I R HR+ G+ + ++ R I+ KL D R
Sbjct: 126 AKVKENIKQALGL----EIEIERAHRVERRPGPRRRDGGRDASRDQPRTIVCKLYDWKQR 181
Query: 370 SKVWAAKTSLKGSGITLSEFL 308
V K G+ ++E L
Sbjct: 182 EAVLRGARKTKPKGLYIAEDL 202
>SB_42627| Best HMM Match : DUF164 (HMM E-Value=0.33)
Length = 412
Score = 35.5 bits (78), Expect = 0.040
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
Frame = -3
Query: 679 EEFLAFKTFTLNALRALQTQVELISLENDRLEMHSRRKILLIHGVPEQQKEDTLATV--V 506
EE +A T L + +T +L++ + LE SRR ++IH VPE+ ++++ + V V
Sbjct: 110 EEDVAEITERLETVATRETTDQLLT-RVEGLENRSRRNNVIIHNVPEEAEKNSPSAVDFV 168
Query: 505 ETIVSKLKLMDFNTSNISRCHRM-GKTFTPERSRPILLKLCDMNLRSKVWAAKTSLKGSG 329
E + + +L + R HR K +RPI +L LR KV SL G G
Sbjct: 169 EKFL-RNELEIQQPIEVKRAHRSPNKKRHDGSARPIFFRL----LREKV-----SLDGEG 218
Query: 328 ITLSEFLT 305
T+ T
Sbjct: 219 FTILNMYT 226
>SB_32382| Best HMM Match : TerB (HMM E-Value=3.7)
Length = 194
Score = 35.5 bits (78), Expect = 0.040
Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = -3
Query: 601 ENDRLEMHSRRKILLIHGVPE-QQKEDTLATVVETIVSKLKLM 476
E D LE +SRR + I G+ + ++KEDT ++ETI +K+ ++
Sbjct: 144 ELDELEQYSRRNNIRIDGISQTEEKEDTDRLIIETIKAKIGIV 186
>SB_3042| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 35.5 bits (78), Expect = 0.040
Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = -3
Query: 601 ENDRLEMHSRRKILLIHGVPE-QQKEDTLATVVETIVSKLKLM 476
E D LE +SRR + I G+ + ++KEDT ++ETI +K+ ++
Sbjct: 144 ELDELEQYSRRNNIRIDGISQTEEKEDTDRLIIETIKAKIGIV 186
>SB_26976| Best HMM Match : Exo_endo_phos (HMM E-Value=5.3)
Length = 297
Score = 35.5 bits (78), Expect = 0.040
Identities = 23/101 (22%), Positives = 47/101 (46%)
Frame = -3
Query: 634 ALQTQVELISLENDRLEMHSRRKILLIHGVPEQQKEDTLATVVETIVSKLKLMDFNTSNI 455
A++ Q++ + RL+ +S R+ L G+PE++ E + ++ ++ +L +
Sbjct: 2 AMEEQLDEEREKRIRLDAYSLREHLSFKGIPEKEGE-SCENIIRDLLHELGFSNPQNIGF 60
Query: 454 SRCHRMGKTFTPERSRPILLKLCDMNLRSKVWAAKTSLKGS 332
HR+GK + PI+ ++ R + K L GS
Sbjct: 61 HAVHRLGKPRDGGKPSPIIARVISRQDRDLDFRKKRKLVGS 101
>SB_13857| Best HMM Match : Thymosin (HMM E-Value=1.8)
Length = 144
Score = 35.5 bits (78), Expect = 0.040
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = -3
Query: 577 SRRKILLIHGVPEQQKEDTLATVVETIVSKLKLMD--FNTSNISRCHRMGKTF-TPERSR 407
S R L+ + + E +ED A V + +V+ K D N I R HR+G+ ++ R
Sbjct: 69 SMRNNLIFYNMNECAEEDPFAVVQKVLVTNFKFKDEEVNAIEIERAHRLGRRDPNKDKPR 128
Query: 406 PILLKL 389
P++ +L
Sbjct: 129 PLIARL 134
>SB_15468| Best HMM Match : DNA_RNApol_7kD (HMM E-Value=7.4)
Length = 212
Score = 34.3 bits (75), Expect = 0.093
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Frame = -3
Query: 592 RLEMHSRRKILLIHGVPEQQKEDTLATVVETIVSKLKLMDFNTSNISRC--HRMGKTFTP 419
R ++SRR L+++ + + +E++ V +V +LKL + C HR+GK
Sbjct: 104 RQSLYSRRWNLVVYKLTDAPEENSEKLVKGELVRRLKLGSKEVEEMKLCGVHRLGK---- 159
Query: 418 ERSRPILLKLCDMNLRSKVWAAKTSLKGSGITLSEFLTKRRHDI 287
+ D R KVW A+ +LKG I++ E + ++ +I
Sbjct: 160 --------RRAD---REKVWKARYNLKGQTISIGEDVPRQIQEI 192
>SB_25470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 33.9 bits (74), Expect = 0.12
Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 5/107 (4%)
Frame = -3
Query: 592 RLEMHSRRKILLIHGVPEQQKED---TLATVVETIVSKLKLMDFNTSNIS--RCHRMGKT 428
+LE SRR L G+PE E T V + I LK ++S R HR G T
Sbjct: 124 KLESFSRRNNLRFFGIPEGTNESWNGTEEAVRDFIHKNLKAGPKQAGDVSFERVHRTG-T 182
Query: 427 FTPERSRPILLKLCDMNLRSKVWAAKTSLKGSGITLSEFLTKRRHDI 287
RPI+ K + +V + +L G+ ++E K D+
Sbjct: 183 KDKSSPRPIIAKFSFFKDKEEVRSLAKNLAGTSFGIAEDYPKEIADV 229
>SB_56575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 33.1 bits (72), Expect = 0.21
Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 18/159 (11%)
Frame = -3
Query: 595 DRLEMHSRRKILLIHGVPEQQKEDTLATVVETIVSKLKLMDFNTSNISRCHRMGKTFTPE 416
D +E +SRR L I GVP E+T V + V ++ ++ +IS HR+
Sbjct: 91 DDIEQYSRRDCLEIKGVPVTPTENTNDVVKK--VGEIMEVEILEEDISTSHRLPAPRPKP 148
Query: 415 RSRP-------------ILLKLCDMNLRSKVWAAKTSLKGSG---ITLSEFLTK-RRHDI 287
RP I++K ++R + +A + L+ + I L+ K R +
Sbjct: 149 NQRPAKPGVHVNTPTASIIVKFARRDVRDRFYAGRKHLQDNSVRDIGLARSDNKITRSCL 208
Query: 286 FMSARQRFGVTRCWTRDGCVYV-QGSDGVRHRVEVMSDL 173
+SAR WT++G V++ + SD + DL
Sbjct: 209 ALSARHDLKFKFIWTQNGKVFLRKNSDSQAVLISKSQDL 247
>SB_45202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 380
Score = 32.7 bits (71), Expect = 0.28
Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 28/154 (18%)
Frame = -3
Query: 595 DRLEMHSRRKILLIHGVPEQQKEDTLATVVETIVSKLKLMDFNTSNISRCHRMGKTFTPE 416
D +E +SRR L I GVP E+T V + V +L ++ +IS HR+ +
Sbjct: 13 DDIEQYSRRDCLEIKGVPLTPTENTNDVVKK--VGELMEVEILEEDISTSHRLPASRPNP 70
Query: 415 RSRP-------------ILLKLCDMNLRSKVWAAKTSLKGS-----GIT-------LSEF 311
RP I++K ++R + +A + L+ G+T +SE
Sbjct: 71 NQRPAKPGVHVNTPTASIIVKFARRDVRDRFYAGRKHLRDKPVRDIGLTRSDNKIYISES 130
Query: 310 LTKRRHDIF---MSARQRFGVTRCWTRDGCVYVQ 218
L+ ++F +SAR WT++G V+++
Sbjct: 131 LSPGNRELFKAALSARHDLKFKYIWTQNGKVFLR 164
>SB_54016| Best HMM Match : Dehydratase_SU (HMM E-Value=1.6)
Length = 252
Score = 32.3 bits (70), Expect = 0.37
Identities = 22/86 (25%), Positives = 42/86 (48%)
Frame = -3
Query: 595 DRLEMHSRRKILLIHGVPEQQKEDTLATVVETIVSKLKLMDFNTSNISRCHRMGKTFTPE 416
D + + RR L G+P+ +D + V+ET + L ++ +IS HR+ T +
Sbjct: 107 DEQQQYGRRDCLEFVGIPKVDNDDPVKLVIET--AALAGVEVKEDDISIAHRLKP--TKK 162
Query: 415 RSRPILLKLCDMNLRSKVWAAKTSLK 338
I+ K + R +V++ + +LK
Sbjct: 163 GQDRIIAKFIRRSKRDEVYSNRKNLK 188
>SB_53689| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 279
Score = 32.3 bits (70), Expect = 0.37
Identities = 22/86 (25%), Positives = 42/86 (48%)
Frame = -3
Query: 595 DRLEMHSRRKILLIHGVPEQQKEDTLATVVETIVSKLKLMDFNTSNISRCHRMGKTFTPE 416
D + + RR L G+P+ +D + V+ET + L ++ +IS HR+ T +
Sbjct: 107 DEQQQYGRRDCLEFVGIPKVDNDDPVKLVIET--AALAGVEVKEDDISIAHRLKP--TKK 162
Query: 415 RSRPILLKLCDMNLRSKVWAAKTSLK 338
I+ K + R +V++ + +LK
Sbjct: 163 GQDRIIAKFIRRSKRDEVYSNRKNLK 188
>SB_23626| Best HMM Match : WXG100 (HMM E-Value=2)
Length = 279
Score = 32.3 bits (70), Expect = 0.37
Identities = 22/86 (25%), Positives = 42/86 (48%)
Frame = -3
Query: 595 DRLEMHSRRKILLIHGVPEQQKEDTLATVVETIVSKLKLMDFNTSNISRCHRMGKTFTPE 416
D + + RR L G+P+ +D + V+ET + L ++ +IS HR+ T +
Sbjct: 107 DEQQQYGRRDCLEFVGIPKVDNDDPVKLVIET--AALAGVEVKEDDISIAHRLKP--TKK 162
Query: 415 RSRPILLKLCDMNLRSKVWAAKTSLK 338
I+ K + R +V++ + +LK
Sbjct: 163 GQDRIIAKFIRRSKRDEVYSNRKNLK 188
>SB_22823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 279
Score = 32.3 bits (70), Expect = 0.37
Identities = 22/86 (25%), Positives = 42/86 (48%)
Frame = -3
Query: 595 DRLEMHSRRKILLIHGVPEQQKEDTLATVVETIVSKLKLMDFNTSNISRCHRMGKTFTPE 416
D + + RR L G+P+ +D + V+ET + L ++ +IS HR+ T +
Sbjct: 107 DEQQQYGRRDCLEFVGIPKVDNDDPVKLVIET--AALAGVEVKEDDISIAHRLKP--TKK 162
Query: 415 RSRPILLKLCDMNLRSKVWAAKTSLK 338
I+ K + R +V++ + +LK
Sbjct: 163 GQDRIIAKFIRRSKRDEVYSNRKNLK 188
>SB_5091| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 32.3 bits (70), Expect = 0.37
Identities = 22/86 (25%), Positives = 42/86 (48%)
Frame = -3
Query: 595 DRLEMHSRRKILLIHGVPEQQKEDTLATVVETIVSKLKLMDFNTSNISRCHRMGKTFTPE 416
D + + RR L G+P+ +D + V+ET + L ++ +IS HR+ T +
Sbjct: 107 DEQQQYGRRDCLEFVGIPKVDNDDPVKLVIET--AALAGVEVKEDDISIAHRLKP--TKK 162
Query: 415 RSRPILLKLCDMNLRSKVWAAKTSLK 338
I+ K + R +V++ + +LK
Sbjct: 163 GQDRIIAKFIRRSKRDEVYSNRKNLK 188
>SB_58004| Best HMM Match : WXG100 (HMM E-Value=2)
Length = 235
Score = 32.3 bits (70), Expect = 0.37
Identities = 22/86 (25%), Positives = 42/86 (48%)
Frame = -3
Query: 595 DRLEMHSRRKILLIHGVPEQQKEDTLATVVETIVSKLKLMDFNTSNISRCHRMGKTFTPE 416
D + + RR L G+P+ +D + V+ET + L ++ +IS HR+ T +
Sbjct: 107 DEQQQYGRRDCLEFVGIPKVDNDDPVKLVIET--AALAGVEVKEDDISIAHRLKP--TKK 162
Query: 415 RSRPILLKLCDMNLRSKVWAAKTSLK 338
I+ K + R +V++ + +LK
Sbjct: 163 GQDRIIAKFIRRSKRDEVYSNRKNLK 188
>SB_57509| Best HMM Match : WXG100 (HMM E-Value=2)
Length = 206
Score = 32.3 bits (70), Expect = 0.37
Identities = 22/86 (25%), Positives = 42/86 (48%)
Frame = -3
Query: 595 DRLEMHSRRKILLIHGVPEQQKEDTLATVVETIVSKLKLMDFNTSNISRCHRMGKTFTPE 416
D + + RR L G+P+ +D + V+ET + L ++ +IS HR+ T +
Sbjct: 107 DEQQQYGRRDCLEFVGIPKVDNDDPVKLVIET--AALAGVEVKEDDISIAHRLKP--TKK 162
Query: 415 RSRPILLKLCDMNLRSKVWAAKTSLK 338
I+ K + R +V++ + +LK
Sbjct: 163 GQDRIIAKFIRRSKRDEVYSNRKNLK 188
>SB_46219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 279
Score = 32.3 bits (70), Expect = 0.37
Identities = 22/86 (25%), Positives = 42/86 (48%)
Frame = -3
Query: 595 DRLEMHSRRKILLIHGVPEQQKEDTLATVVETIVSKLKLMDFNTSNISRCHRMGKTFTPE 416
D + + RR L G+P+ +D + V+ET + L ++ +IS HR+ T +
Sbjct: 107 DEQQQYGRRDCLEFVGIPKVDNDDPVKLVIET--AALAGVEVKEDDISIAHRLKP--TKK 162
Query: 415 RSRPILLKLCDMNLRSKVWAAKTSLK 338
I+ K + R +V++ + +LK
Sbjct: 163 GQDRIIAKFIRRSKRDEVYSNRKNLK 188
>SB_34971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 279
Score = 32.3 bits (70), Expect = 0.37
Identities = 22/86 (25%), Positives = 42/86 (48%)
Frame = -3
Query: 595 DRLEMHSRRKILLIHGVPEQQKEDTLATVVETIVSKLKLMDFNTSNISRCHRMGKTFTPE 416
D + + RR L G+P+ +D + V+ET + L ++ +IS HR+ T +
Sbjct: 107 DEQQQYGRRDCLEFVGIPKVDNDDPVKLVIET--AALAGVEVKEDDISIAHRLKP--TKK 162
Query: 415 RSRPILLKLCDMNLRSKVWAAKTSLK 338
I+ K + R +V++ + +LK
Sbjct: 163 GQDRIIAKFIRRSKRDEVYSNRKNLK 188
>SB_23474| Best HMM Match : Exo_endo_phos (HMM E-Value=2.4e-12)
Length = 623
Score = 32.3 bits (70), Expect = 0.37
Identities = 22/86 (25%), Positives = 42/86 (48%)
Frame = -3
Query: 595 DRLEMHSRRKILLIHGVPEQQKEDTLATVVETIVSKLKLMDFNTSNISRCHRMGKTFTPE 416
D + + RR L G+P+ +D + V+ET + L ++ +IS HR+ T +
Sbjct: 107 DEQQQYGRRDCLEFVGIPKVDNDDPVKLVIET--AALAGVEVKEDDISIAHRLKP--TKK 162
Query: 415 RSRPILLKLCDMNLRSKVWAAKTSLK 338
I+ K + R +V++ + +LK
Sbjct: 163 GQDRIIAKFIRRSKRDEVYSNRKNLK 188
>SB_18197| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1153
Score = 32.3 bits (70), Expect = 0.37
Identities = 22/86 (25%), Positives = 42/86 (48%)
Frame = -3
Query: 595 DRLEMHSRRKILLIHGVPEQQKEDTLATVVETIVSKLKLMDFNTSNISRCHRMGKTFTPE 416
D + + RR L G+P+ +D + V+ET + L ++ +IS HR+ T +
Sbjct: 107 DEQQQYGRRDCLEFVGIPKVDNDDPVKLVIET--AALAGVEVKEDDISIAHRLKP--TKK 162
Query: 415 RSRPILLKLCDMNLRSKVWAAKTSLK 338
I+ K + R +V++ + +LK
Sbjct: 163 GQDRIIAKFIRRSKRDEVYSNRKNLK 188
>SB_15583| Best HMM Match : WXG100 (HMM E-Value=2)
Length = 279
Score = 32.3 bits (70), Expect = 0.37
Identities = 22/86 (25%), Positives = 42/86 (48%)
Frame = -3
Query: 595 DRLEMHSRRKILLIHGVPEQQKEDTLATVVETIVSKLKLMDFNTSNISRCHRMGKTFTPE 416
D + + RR L G+P+ +D + V+ET + L ++ +IS HR+ T +
Sbjct: 107 DEQQQYGRRDCLEFVGIPKVDNDDPVKLVIET--AALAGVEVKEDDISIAHRLKP--TKK 162
Query: 415 RSRPILLKLCDMNLRSKVWAAKTSLK 338
I+ K + R +V++ + +LK
Sbjct: 163 GQDRIIAKFIRRSKRDEVYSNRKNLK 188
>SB_13485| Best HMM Match : HSBP1 (HMM E-Value=1.4)
Length = 193
Score = 31.5 bits (68), Expect = 0.65
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Frame = -3
Query: 628 QTQVELISLEN--DRLEMHSRRKILLIHGVPEQQKE---DTLATVVETIVSK--LKLMDF 470
+T E++ +++ + LE SRR + + G+PE E D+ A V E I +K L++
Sbjct: 95 ETDSEVVEVKDALEYLENQSRRNNIRVSGIPESPGESWADSEAKVKEAIQTKLGLEIKIE 154
Query: 469 NTSNISRCHRMGKTFT-PERSRPILLKLCDMNLRSKVWAAKTSL 341
+ R G++ T E+ RP + +C++ K W AK ++
Sbjct: 155 RAHRVERKKAKGRSLTQSEKERPRTI-VCEI----KDWKAKEAV 193
>SB_37565| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 286
Score = 31.1 bits (67), Expect = 0.86
Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Frame = -2
Query: 170 CSCQDDYAGRCCSKEGTN--RQGHKGVCSCDQTKTCGCEQEVVFVLGVIHCFFIC 12
C+CQ Y GR C K+ +QG VC + G V+ L F C
Sbjct: 25 CTCQPGYTGRNCEKDIPEMLKQGELNVCDRRDSTVYGTAYRTVYQLKYETKIFCC 79
>SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5834
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = -2
Query: 245 DSGRLRLRSGIG-WGATSCRSDV*SGCSCQDDYAGRCCSKE-GTNRQGHKGVCSCDQ 81
D G L GI W T +D C C D + G C KE ++ G CSCD+
Sbjct: 141 DPGYLGNDCGIRCWNGTVVVNDGKPECVCSDCFTGVFCDKECDSHGVCRDGKCSCDK 197
>SB_55287| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/64 (34%), Positives = 30/64 (46%)
Frame = -3
Query: 595 DRLEMHSRRKILLIHGVPEQQKEDTLATVVETIVSKLKLMDFNTSNISRCHRMGKTFTPE 416
D +E +SRR L I GVP E+T V E V +L ++ +IS HR+
Sbjct: 13 DDVEQYSRRDCLEIKGVPVTLTENTNDVVKE--VGELMEVEILEEDISTSHRLPAPRPNP 70
Query: 415 RSRP 404
RP
Sbjct: 71 HQRP 74
>SB_51572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/64 (34%), Positives = 30/64 (46%)
Frame = -3
Query: 595 DRLEMHSRRKILLIHGVPEQQKEDTLATVVETIVSKLKLMDFNTSNISRCHRMGKTFTPE 416
D +E +SRR L I GVP E+T V E V +L ++ +IS HR+
Sbjct: 13 DDVEQYSRRDCLEIKGVPVTLTENTNDVVKE--VGELMEVEILEEDISTSHRLPAPRPNP 70
Query: 415 RSRP 404
RP
Sbjct: 71 HQRP 74
>SB_39979| Best HMM Match : RVT_1 (HMM E-Value=4.6e-12)
Length = 792
Score = 30.3 bits (65), Expect = 1.5
Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 28/154 (18%)
Frame = -3
Query: 595 DRLEMHSRRKILLIHGVPEQQKEDTLATVVETIVSKLKLMDFNTSNISRCHRMGKTFTPE 416
D +E +SRR L I GVP E+T V + V +L ++ +IS HR+
Sbjct: 13 DDIEQYSRRDCLEIKGVPVTPTENTNDVVKK--VGELMEVEILEEDISTSHRLPAPRPNP 70
Query: 415 RSRP-------------ILLKLCDMNLRSKVWAAK-----TSLKGSGIT-------LSEF 311
RP I++ ++R + +A + S++ G+T +SE
Sbjct: 71 NQRPAKPGVHVNTPTASIIVTFARRDVRDRFYAGRKHLRDNSVRDIGLTRSDNKIYISES 130
Query: 310 LTKRRHDIF---MSARQRFGVTRCWTRDGCVYVQ 218
L+ ++F +SAR WT++G V+++
Sbjct: 131 LSPGNRELFKAALSARHDLKFKYIWTQNGKVFLR 164
>SB_936| Best HMM Match : DUF1127 (HMM E-Value=3.2)
Length = 280
Score = 30.3 bits (65), Expect = 1.5
Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 28/154 (18%)
Frame = -3
Query: 595 DRLEMHSRRKILLIHGVPEQQKEDTLATVVETIVSKLKLMDFNTSNISRCHRMGKTFTPE 416
D +E +SRR L I GVP E+T V + V +L ++ +IS HR+
Sbjct: 91 DDIEQYSRRDCLEIKGVPVTPTENTNDVVKK--VGELMEVEILEEDISTSHRLPAPRPNP 148
Query: 415 RSRP-------------ILLKLCDMNLRSKVWAAK-----TSLKGSGIT-------LSEF 311
RP I++ ++R + +A + S++ G+T +SE
Sbjct: 149 NQRPAKPGVHVNTPTASIIVTFARRDVRDRFYAGRKHLRDNSVRDIGLTRSDNKIYISES 208
Query: 310 LTKRRHDIF---MSARQRFGVTRCWTRDGCVYVQ 218
L+ ++F +SAR WT++G V+++
Sbjct: 209 LSPGNRELFKAALSARHDLKFKYIWTQNGKVFLR 242
>SB_27389| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = -3
Query: 595 DRLEMHSRRKILLIHGVPEQQKEDTLATVVETIVSKLKLMDFNTSNISRCHRMGKTFTPE 416
D +E +SRR L I GVP E+T V + V +L ++ +IS HR+
Sbjct: 91 DDIEQYSRRDCLEIKGVPVTPTENTNDVVKK--VGELMEVEILEEDISTSHRLPAPRPNP 148
Query: 415 RSRP 404
RP
Sbjct: 149 NQRP 152
>SB_651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 209
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Frame = -3
Query: 628 QTQVELISLEN--DRLEMHSRRKILLIHGVPEQQKEDTLATVVETIVSKLKLM--DFNTS 461
+T E++ +++ + LE SRR + + G+PE Q E + + + V+KL ++ D+N
Sbjct: 95 ETDSEVVKVKDALEYLENQSRRNNIRVSGIPESQGESWVDSEAKVKVNKLCILMADWNLD 154
Query: 460 NISR-CHRMGKTF 425
+ HR+ F
Sbjct: 155 LMKHDTHRLTAEF 167
>SB_39791| Best HMM Match : RVT_1 (HMM E-Value=0.083)
Length = 497
Score = 29.5 bits (63), Expect = 2.6
Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 3/129 (2%)
Frame = -3
Query: 595 DRLEMHSRRKILLIHGVPEQQKEDTLATVVETIVSKLKLMDFNTSNISRCHRMGKTFTPE 416
D +E +SRR L I GVP E+T V E + NT S + + +
Sbjct: 69 DDIEQYSRRDCLEIKGVPLTPTENTNDVVKERPAK--PGVHVNTPTASIIVKFARRDVRD 126
Query: 415 RSRPILLKLCDMNLRSKVWAAKTSLKGSGITLSEFLTKRRHDIF---MSARQRFGVTRCW 245
R L D ++R + ++ K I +SE L+ ++F +SAR W
Sbjct: 127 RFYAGRKHLRDKSVRD-IGLTRSDNK---IYISESLSPGNRELFKAALSARHDLKFKYIW 182
Query: 244 TRDGCVYVQ 218
T++G V+++
Sbjct: 183 TQNGKVFLR 191
>SB_18579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = -2
Query: 170 CSCQDDYAGRCCS--KEGTNRQGHKGVCSCDQTKTCG 66
C C Y GRCC G + G VCS KTCG
Sbjct: 100 CYCSSHYRGRCCEIVHGGWSTWGSWSVCS----KTCG 132
>SB_43059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 722
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -3
Query: 190 EVMSDLDALAKTTMPEDAAQKRAQTGKDTKESAAATRPKRVAANKK 53
E S + + ++ P+DA Q+ +Q S A TRP+R A K
Sbjct: 155 ETNSQVPDVLESPEPDDAQQQPSQVAMPPDSSQAITRPRRELATTK 200
>SB_27198| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = -3
Query: 595 DRLEMHSRRKILLIHGVPEQQKEDTLATVVETIVSKLKLMDFNTSNISRCHRMGKTFTPE 416
D +E +SRR L I GVP E+T VV+ + +K ++ +IS HR+
Sbjct: 13 DDIEQYSRRDCLEIKGVPVTPTENT-NDVVKKVGEHMK-VEILEEDISTSHRLPAPRPNP 70
Query: 415 RSRP 404
RP
Sbjct: 71 NQRP 74
>SB_19857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 29.5 bits (63), Expect = 2.6
Identities = 24/92 (26%), Positives = 44/92 (47%)
Frame = -3
Query: 613 LISLENDRLEMHSRRKILLIHGVPEQQKEDTLATVVETIVSKLKLMDFNTSNISRCHRMG 434
L SL + + RR L G+P+ +D + V+ET + L ++ +IS HR+
Sbjct: 5 LCSLPIEVGAVFGRRDCLEFVGIPKVDNDDPVKLVIET--AALAGVEVKEDDISIAHRLK 62
Query: 433 KTFTPERSRPILLKLCDMNLRSKVWAAKTSLK 338
T + I+ K + R +V++ + +LK
Sbjct: 63 P--TKKGQDRIIAKFIRRSKRDEVYSNRKNLK 92
>SB_56697| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 582
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -2
Query: 197 SCRSDV*SGCSCQDDYAGRCCSKEGTN 117
SC SD CSC +D G+ CSK N
Sbjct: 133 SCDSDRDYECSCNEDKTGKDCSKWKAN 159
>SB_26758| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-40)
Length = 1413
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
Frame = -2
Query: 176 SGCSCQDDY---AGRCCSKEGTNRQGHKGVCSCDQTKTCG-CEQEV 51
SG C DD +G CC + N G C D + G C+ +V
Sbjct: 110 SGGCCDDDVNNSSGGCCDDDVNNNNSSGGCCDDDVNNSSGSCDDDV 155
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
Frame = -2
Query: 173 GCSCQDDY---AGRCCSKEGTNRQGHKGVCSCDQTKTCG-CEQEV 51
GC C DD +G CC + N G C D + G C+ +V
Sbjct: 3 GC-CDDDVNNSSGGCCDDDVNNNNSSGGCCDDDVNNSSGSCDDDV 46
>SB_43555| Best HMM Match : Shugoshin_N (HMM E-Value=2.7)
Length = 99
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -3
Query: 598 NDRLEMHSRRKILLIHGVPEQQKEDT 521
ND LE + RR+ L I G+PE + EDT
Sbjct: 73 ND-LEQYGRRECLEIRGIPEVKGEDT 97
>SB_23221| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 109
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -3
Query: 598 NDRLEMHSRRKILLIHGVPEQQKEDT 521
ND LE + RR+ L I G+PE + EDT
Sbjct: 73 ND-LEQYGRRECLEIRGIPEVKGEDT 97
>SB_56379| Best HMM Match : Shugoshin_N (HMM E-Value=2.7)
Length = 109
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -3
Query: 598 NDRLEMHSRRKILLIHGVPEQQKEDT 521
ND LE + RR+ L I G+PE + EDT
Sbjct: 73 ND-LEQYGRRECLEIRGIPEVKGEDT 97
>SB_37800| Best HMM Match : Shugoshin_N (HMM E-Value=2.7)
Length = 109
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -3
Query: 598 NDRLEMHSRRKILLIHGVPEQQKEDT 521
ND LE + RR+ L I G+PE + EDT
Sbjct: 73 ND-LEQYGRRECLEIRGIPEVKGEDT 97
>SB_11157| Best HMM Match : NUC173 (HMM E-Value=9.2e-39)
Length = 1060
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -3
Query: 190 EVMSDLDALAKTTMPEDAAQKRAQTGKDTKESAAATRPKRVAANK 56
E S + + ++ P+DA Q+ +Q S A TRP+R A +
Sbjct: 276 ETNSQVPDVLESPEPDDAQQQPSQVAMPPDSSQAITRPRREVAGE 320
>SB_39850| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = -3
Query: 238 DGCVYVQGSDGVRHRVEVMSDLDALAKTTMPEDAAQKRAQTGKDTKESAAATRPKR 71
+G Y + V E S + + ++ P+DA Q+ +Q S A TRP+R
Sbjct: 147 EGTTYRRNRRQVISTGETNSQVPDVLESPEPDDAQQQPSQVALPPDSSQAITRPRR 202
>SB_37641| Best HMM Match : WXG100 (HMM E-Value=2)
Length = 166
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = -3
Query: 595 DRLEMHSRRKILLIHGVPEQQKEDTLATVVETIVSKLKLMDFNTSNISRCHRM 437
D + + RR L G+P+ +D + V+ET + L ++ +IS HR+
Sbjct: 107 DEQQQYGRRDCLEFVGIPKVDNDDPVKLVIET--AALAGVEVKEDDISIAHRL 157
>SB_35310| Best HMM Match : Cadherin (HMM E-Value=5.9e-23)
Length = 1250
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = -2
Query: 242 SGRLRLRSGIGWGATSCRSDV*SGCSCQDDYAGRCCSKEGTNRQGHKGVCSCDQT 78
+ R R ++ + +C + SC D G C+ G + GVCSC+QT
Sbjct: 33 TSRTRTKTTVESNGGTCTYALNETKSCGSDNGG--CTGPGASCDEPTGVCSCNQT 85
>SB_6200| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 683
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -2
Query: 206 GATSCRSDV*SG-CSCQDDYAGRCCSKEGTNRQGHKGVCSCDQTKTCGC 63
G++S D +G CSC+++ GR CS+ N G G C + C C
Sbjct: 159 GSSSSLCDHVTGQCSCKENVVGRDCSRCKVNSYGF-GPAGCTE---CAC 203
>SB_56580| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1092
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = -3
Query: 190 EVMSDLDALAKTTMPEDAAQKRAQTGKDTKESAAATRPKRVAANKK*CSFSVSFTASLFV 11
E S + + ++ P+DA Q+ +Q S A TRP+R ++ + AS F+
Sbjct: 1010 ETNSQVPDVLESPEPDDAQQQPSQVALPPDSSQAITRPRRELVKRQYIPVMSALHASSFL 1069
>SB_48988| Best HMM Match : DUF1127 (HMM E-Value=1.5)
Length = 270
Score = 27.9 bits (59), Expect = 8.0
Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 19/160 (11%)
Frame = -3
Query: 595 DRLEMHSRRKILLIHGVP--EQQKEDTLATVVETIVSKLKLMDFNTSNISRCHRMG-KTF 425
D +E +SRR L I GVP + + + E I + +L + R + G
Sbjct: 91 DDIEQYSRRHCLKIKGVPLNTYGEHERRSKREEDISTSHRLPAPRPNPNQRPAKPGVHVN 150
Query: 424 TPERSRPILLKLCDMNLRSKVWAAK-----TSLKGSGIT-------LSEFLTKRRHDIF- 284
TP S I++K ++R + +A + S++ G+T +SE L+ ++F
Sbjct: 151 TPTAS--IIVKFARRDVRDRFYAGRKHLRDKSVRDIGLTRSDNKIYISESLSPGNRELFK 208
Query: 283 --MSARQRFGVTRCWTRDGCVYV-QGSDGVRHRVEVMSDL 173
+SAR WT++G V++ + +DG + DL
Sbjct: 209 AALSARHDLKFKYIWTQNGKVFLRKNNDGQAVLISKSQDL 248
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,792,779
Number of Sequences: 59808
Number of extensions: 470603
Number of successful extensions: 1643
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 1445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1634
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1757375282
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -