Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0066
(700 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_44732| Best HMM Match : TSP_1 (HMM E-Value=0) 40 0.003
SB_33483| Best HMM Match : TSP_1 (HMM E-Value=0) 36 0.042
SB_33951| Best HMM Match : Gamma-thionin (HMM E-Value=5) 35 0.073
SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0) 33 0.17
SB_53102| Best HMM Match : CUB (HMM E-Value=3.3e-40) 33 0.17
SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_47942| Best HMM Match : TSP_1 (HMM E-Value=0) 33 0.22
SB_12784| Best HMM Match : ADAM_spacer1 (HMM E-Value=1.4e-23) 33 0.22
SB_42670| Best HMM Match : RVT_1 (HMM E-Value=5.6e-27) 33 0.29
SB_32913| Best HMM Match : TSP_1 (HMM E-Value=1.4e-16) 33 0.29
SB_8667| Best HMM Match : SAP (HMM E-Value=2.3) 33 0.29
SB_8067| Best HMM Match : TSP_1 (HMM E-Value=1.1e-22) 33 0.29
SB_567| Best HMM Match : RVT_1 (HMM E-Value=8.3e-05) 33 0.29
SB_51268| Best HMM Match : SAP (HMM E-Value=2.3) 33 0.29
SB_37579| Best HMM Match : SAP (HMM E-Value=2.3) 33 0.29
SB_22859| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_16012| Best HMM Match : Glyco_hydro_20 (HMM E-Value=0) 33 0.29
SB_54193| Best HMM Match : REF (HMM E-Value=8.4) 32 0.39
SB_44750| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_32784| Best HMM Match : RVT_1 (HMM E-Value=3.9e-26) 32 0.39
SB_30073| Best HMM Match : RVT_1 (HMM E-Value=3e-26) 32 0.39
SB_6320| Best HMM Match : Exo_endo_phos (HMM E-Value=4.8) 32 0.39
SB_41512| Best HMM Match : SAP (HMM E-Value=2.3) 32 0.39
SB_34517| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_26251| Best HMM Match : RVT_1 (HMM E-Value=0.0014) 32 0.39
SB_31489| Best HMM Match : Ion_trans (HMM E-Value=0.015) 32 0.51
SB_20844| Best HMM Match : Ion_trans (HMM E-Value=0) 32 0.51
SB_38612| Best HMM Match : TSP_1 (HMM E-Value=3.3e-11) 31 0.90
SB_3851| Best HMM Match : TSP_1 (HMM E-Value=3.7e-24) 31 1.2
SB_48913| Best HMM Match : TSP_1 (HMM E-Value=1.8e-11) 31 1.2
SB_59407| Best HMM Match : Toxin_4 (HMM E-Value=4.4) 30 2.1
SB_45040| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_57496| Best HMM Match : TSP_1 (HMM E-Value=3.2e-13) 29 3.6
SB_56622| Best HMM Match : ImpA-rel_N (HMM E-Value=1) 29 3.6
SB_44951| Best HMM Match : TSP_1 (HMM E-Value=3.2e-13) 29 3.6
SB_25565| Best HMM Match : TSP_1 (HMM E-Value=0.0032) 29 3.6
SB_534| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_24894| Best HMM Match : TSP_1 (HMM E-Value=1.8e-10) 29 4.8
SB_2401| Best HMM Match : TSP_1 (HMM E-Value=0) 29 4.8
SB_50658| Best HMM Match : Pox_D2 (HMM E-Value=4.7) 29 4.8
SB_45039| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_45005| Best HMM Match : RVT_1 (HMM E-Value=6.6e-32) 29 4.8
SB_40851| Best HMM Match : TSP_1 (HMM E-Value=3.4e-09) 29 4.8
SB_12543| Best HMM Match : TSP_1 (HMM E-Value=1.4e-07) 29 4.8
SB_32444| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_12085| Best HMM Match : TBP (HMM E-Value=3.5e-35) 28 6.3
SB_6989| Best HMM Match : LRR_1 (HMM E-Value=0.074) 28 8.4
SB_19793| Best HMM Match : TSP_1 (HMM E-Value=0.0027) 28 8.4
SB_11766| Best HMM Match : Reprolysin (HMM E-Value=1.6e-08) 28 8.4
SB_7655| Best HMM Match : p450 (HMM E-Value=0) 28 8.4
>SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4924
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 13/61 (21%)
Frame = +2
Query: 530 YRWSIERGPCSASCGGGVRLITAQCHR--------DQKC----PPPRYE-SCNTHSCEFV 670
+ W++E+ CS SCGGG AQC R ++KC PPR E CN C V
Sbjct: 1088 FYWAVEKTGCSVSCGGGAERSYAQCRRSDDGSPVAERKCDVTKKPPRQEMHCNRQPCPPV 1147
Query: 671 W 673
W
Sbjct: 1148 W 1148
>SB_44732| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 675
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Frame = +2
Query: 533 RWSIERGPCSASCGGGVRLITAQCH-RDQKC----PPPRYESCNTHSCEFVW 673
RWSI R CS +CG GV+ C RD +C P R CN +C VW
Sbjct: 518 RWSIVRIYCSVTCGDGVQTRDVTCSTRDDRCNAKSMPQRQRKCNLGACP-VW 568
Score = 37.1 bits (82), Expect = 0.014
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Frame = +2
Query: 536 WSIER-GPCSASCGGGVRLITAQC-HRDQKC----PPPRYESCNTHSC 661
W++ + CS +CGGG+ T C RDQ C PP CN+ C
Sbjct: 264 WTVGKWSECSRTCGGGISARTVTCSSRDQPCYRMSKPPTTRICNSQEC 311
Score = 35.1 bits (77), Expect = 0.055
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = +2
Query: 521 PLEYRWSI-ERGPCSASCGGGVRLITAQCHR-----DQKCPPPRYESCNTHSCEFVW 673
P+ +W+ + G CS +CGGGV+ C D + P CNT +C W
Sbjct: 158 PVCPQWNAGDWGQCSLTCGGGVQTRRIDCSSSLTKCDHRKKPVESRRCNTEACPATW 214
Score = 31.5 bits (68), Expect = 0.68
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 6/49 (12%)
Frame = +2
Query: 533 RWSIER-GPCSASCGGGVRLITAQCHR-----DQKCPPPRYESCNTHSC 661
RW E+ CS +CG G R T +C+ D + P E CN C
Sbjct: 463 RWISEQWSQCSVTCGEGTRKRTVECNSGEKNCDMRSRPIERERCNMGGC 511
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Frame = +2
Query: 539 SIERGPCSASCGGGVRLITAQCHRDQK-CPPPR----YESCNTHSC 661
S E G CS +CG G++ +C +K C P + CN +C
Sbjct: 620 SQEWGECSVTCGVGLQSRPVRCDTQRKPCDPDNKPDSTQQCNRSAC 665
>SB_33483| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 372
Score = 35.5 bits (78), Expect = 0.042
Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 10/58 (17%)
Frame = +2
Query: 536 WSIERGPCSASCGGGVRLITAQC------HRDQKC----PPPRYESCNTHSCEFVWGF 679
WS E CS +CGGGV+ T C H + C P CNTHSC G+
Sbjct: 67 WS-EYMSCSVTCGGGVQYKTRTCTNPPPQHGGKNCSELGPSRMSRDCNTHSCPVDGGY 123
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 10/51 (19%)
Frame = +2
Query: 557 CSASCGGGVRLITAQC------HRDQKC--PPPRYES--CNTHSCEFVWGF 679
C+ +CGGG ++ T C H + C P +E+ CNT +C GF
Sbjct: 132 CTETCGGGTQIRTRTCTNPPPKHGGRDCSRDGPDFETRECNTQACPIDGGF 182
>SB_33951| Best HMM Match : Gamma-thionin (HMM E-Value=5)
Length = 174
Score = 34.7 bits (76), Expect = 0.073
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 13/76 (17%)
Frame = +2
Query: 473 SVDVSVNYSTPTGRTRPLEYRW-SIERGPCSASCGGGVRLITAQC------------HRD 613
+V ++ Y P G+ W +++ G CS +C GG + T C H +
Sbjct: 66 NVGYTITYYAP-GQPNVTSLIWKNVKSGICSKTCAGGTQPHTVTCIREDDGSQISSIHCN 124
Query: 614 QKCPPPRYESCNTHSC 661
Q PP Y CNT +C
Sbjct: 125 QDTRPPGYGPCNTQAC 140
>SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 2681
Score = 33.5 bits (73), Expect = 0.17
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 554 PCSASCGGGVRLITAQCHRDQKCPPPRYES--CNTHSC 661
PC +CG GV + C CP PR ++ C +C
Sbjct: 2255 PCMKTCGTGVMMRQRDCFTGSNCPGPRTDTKKCKVQNC 2292
Score = 31.9 bits (69), Expect = 0.51
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +2
Query: 533 RWSIERGPCSASCGGGVRLITAQCHRDQ--KCPPPRYES--CNTHSC 661
RWS + C+ SCGGGV+ + C +D C R +S C + C
Sbjct: 437 RWS-DWTECTRSCGGGVQFRSRDCFQDDVTSCTGERVQSRLCQSQHC 482
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 536 WSIERGPCSASCGGGVRLITAQCH 607
WS + G CSASCG G R+ T +C+
Sbjct: 1142 WS-DWGSCSASCGPGKRIRTRECN 1164
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +2
Query: 521 PLEYRWSIERG--PCSASCGGGVRLITAQCHRDQKCPP 628
P+ WS G CSA+CG GV+ T C+ Q P
Sbjct: 1540 PVNGTWSPWTGWQSCSATCGDGVQSRTRTCNFPQDAKP 1577
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 536 WSIERGPCSASCGGGVRLITAQCHRDQKCPPPRY 637
WS G CS+SCG GV+ T C P P Y
Sbjct: 1081 WS-SFGACSSSCGKGVKTRTRSCSN----PEPEY 1109
>SB_53102| Best HMM Match : CUB (HMM E-Value=3.3e-40)
Length = 644
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 551 GPCSASCGGGVRLITAQCHRDQKCPPPRYESCNTHSC 661
G CSASCGGG++ C + CNT C
Sbjct: 298 GACSASCGGGIQQRRRVCRGTCRATTTDTRKCNTGEC 334
>SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1680
Score = 33.5 bits (73), Expect = 0.17
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 554 PCSASCGGGVRLITAQCHRDQKCPPPRYES--CNTHSC 661
PC +CG GV + C CP PR ++ C +C
Sbjct: 233 PCMKTCGTGVMMRQRDCFTGSNCPGPRTDTKKCKVQNC 270
>SB_47942| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 2195
Score = 33.1 bits (72), Expect = 0.22
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +2
Query: 536 WSIERGPCSASCGGGVRLITAQCHRDQKCPPPRY--ESCNT 652
WS PC+ +CGGGVRL C + P P+Y +C+T
Sbjct: 801 WS-SYAPCTVTCGGGVRLRVRNCTK----PAPQYGGRNCST 836
Score = 31.1 bits (67), Expect = 0.90
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 8/49 (16%)
Frame = +2
Query: 557 CSASCGGGVRLITAQC------HRDQKCPPPRYE--SCNTHSCEFVWGF 679
C+ SCG G + C H + C P E +CNTH C G+
Sbjct: 338 CTVSCGNGTKFRNRTCTNPEPRHGGRDCDGPAVEILACNTHFCPIHGGY 386
>SB_12784| Best HMM Match : ADAM_spacer1 (HMM E-Value=1.4e-23)
Length = 571
Score = 33.1 bits (72), Expect = 0.22
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +2
Query: 551 GPCSASCGGGVRLITAQCHR-DQKCPP 628
G CS +CGGG++ +C+ + +CPP
Sbjct: 270 GACSRTCGGGIQFAKRECNNPEYECPP 296
>SB_42670| Best HMM Match : RVT_1 (HMM E-Value=5.6e-27)
Length = 591
Score = 32.7 bits (71), Expect = 0.29
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +2
Query: 230 LQDNYLKYDPSVPQNLQIVEMDSNILDLKESFRYEGEAITAGTLLRWN 373
LQ N+LKY PSVPQ L + S +++ E ++ G I+A L WN
Sbjct: 397 LQINFLKYQPSVPQRL---ILGSAVVEKVEHYKILGVHISAD--LSWN 439
>SB_32913| Best HMM Match : TSP_1 (HMM E-Value=1.4e-16)
Length = 491
Score = 32.7 bits (71), Expect = 0.29
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 9/51 (17%)
Frame = +2
Query: 536 WSIERGPCSASCGGGVRLITAQCHRDQ------KCPPP---RYESCNTHSC 661
WS E CS SCGGGV+ T C + C P Y+ CN C
Sbjct: 31 WSAEYSTCSYSCGGGVQWKTRTCTNPKPLRGGADCVGPSRAHYKICNPQPC 81
Score = 32.3 bits (70), Expect = 0.39
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 536 WSIERGPCSASCGGGVRLITAQCHRDQKCPPPRYESCNTHSC 661
++ E PCSA+CG G + + C R+ +YE+ SC
Sbjct: 421 YTTEWSPCSATCGKGTQSRSVICRRETFTGSKQYETLPDASC 462
>SB_8667| Best HMM Match : SAP (HMM E-Value=2.3)
Length = 439
Score = 32.7 bits (71), Expect = 0.29
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +2
Query: 230 LQDNYLKYDPSVPQNLQIVEMDSNILDLKESFRYEGEAITAGTLLRWN 373
LQ N+LKY PSVPQ L + S +++ E ++ G I+A L WN
Sbjct: 93 LQINFLKYQPSVPQRL---ILGSAVVEKVEHYKLLGVHISAD--LSWN 135
>SB_8067| Best HMM Match : TSP_1 (HMM E-Value=1.1e-22)
Length = 869
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 536 WSIERGPCSASCGGGVRLITAQCHRDQKCPPPRYESCNTHSC 661
++ E PCSA+CG G + + C R+ +YE+ SC
Sbjct: 108 YTTEWSPCSATCGRGTQSRSVICRRETFTGSKQYETLPDSSC 149
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +2
Query: 497 STPTGRTRPLEYRW-SIERGPCSASCGGGVRLITAQCHRDQKCPPPRYESCNTHSC 661
ST P W E PCSA+CG G + + C R+ +Y++ SC
Sbjct: 549 STQECEIAPCAASWYKTEWNPCSATCGKGSQSRSVVCRREIFAGSNQYKTLPDSSC 604
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 536 WSIERGPCSASCGGGVRLITAQCHRDQKCPPPRYESCNTHSC 661
+ E PCSA+CG G + + C R+ +Y++ SC
Sbjct: 379 YKTEWNPCSATCGKGSQSRSVVCRREIFAGSNQYKTLPDSSC 420
>SB_567| Best HMM Match : RVT_1 (HMM E-Value=8.3e-05)
Length = 371
Score = 32.7 bits (71), Expect = 0.29
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +2
Query: 230 LQDNYLKYDPSVPQNLQIVEMDSNILDLKESFRYEGEAITAGTLLRWN 373
LQ N+LKY PSVPQ L + S +++ E ++ G I+A L WN
Sbjct: 177 LQINFLKYQPSVPQRL---ILGSAVVEKVEHYKILGVHISAD--LSWN 219
>SB_51268| Best HMM Match : SAP (HMM E-Value=2.3)
Length = 204
Score = 32.7 bits (71), Expect = 0.29
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +2
Query: 230 LQDNYLKYDPSVPQNLQIVEMDSNILDLKESFRYEGEAITAGTLLRWN 373
LQ N+LKY PSVPQ L + S +++ E ++ G I+A L WN
Sbjct: 55 LQINFLKYQPSVPQRL---ILGSAVVEKVEHYKLLGVHISAD--LSWN 97
>SB_37579| Best HMM Match : SAP (HMM E-Value=2.3)
Length = 287
Score = 32.7 bits (71), Expect = 0.29
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +2
Query: 230 LQDNYLKYDPSVPQNLQIVEMDSNILDLKESFRYEGEAITAGTLLRWN 373
LQ N+LKY PSVPQ L + S +++ E ++ G I+A L WN
Sbjct: 93 LQINFLKYQPSVPQRL---ILGSAVVEKVEHYKLLGVHISAD--LSWN 135
>SB_22859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1108
Score = 32.7 bits (71), Expect = 0.29
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +2
Query: 230 LQDNYLKYDPSVPQNLQIVEMDSNILDLKESFRYEGEAITAGTLLRWN 373
LQ N+LKY PSVPQ L + S +++ E ++ G I+A L WN
Sbjct: 656 LQINFLKYQPSVPQRL---ILGSAVVEKVEHYKLLGVHISAD--LSWN 698
>SB_16012| Best HMM Match : Glyco_hydro_20 (HMM E-Value=0)
Length = 1788
Score = 32.7 bits (71), Expect = 0.29
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +2
Query: 230 LQDNYLKYDPSVPQNLQIVEMDSNILDLKESFRYEGEAITAGTLLRWN 373
LQ N+LKY PSVPQ L + S +++ E ++ G I+A L WN
Sbjct: 321 LQINFLKYQPSVPQRL---ILGSAVVEKVEHYKLLGVHISAD--LSWN 363
>SB_54193| Best HMM Match : REF (HMM E-Value=8.4)
Length = 172
Score = 32.3 bits (70), Expect = 0.39
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +2
Query: 230 LQDNYLKYDPSVPQNLQIVEMDSNILDLKESFRYEGEAITAGTLLRWN 373
LQ N+LKY PSVPQ L + S +++ E ++ G I+A L WN
Sbjct: 11 LQINFLKYQPSVPQRL---ILGSAVVEKVEYYKLLGVHISAD--LSWN 53
>SB_44750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2190
Score = 32.3 bits (70), Expect = 0.39
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +2
Query: 533 RWSIERGPCSASCGGGVRLITAQCHRDQKCPPPRYESCN 649
+WS E PCS +CGGG R T C P P+Y N
Sbjct: 258 QWS-EYTPCSKTCGGGTRHRTRSCTN----PAPQYGGVN 291
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 10/46 (21%)
Frame = +2
Query: 554 PCSASCGGGVRLITAQC------HRDQKCP----PPRYESCNTHSC 661
PCSA+CGGG + C H + C P SCNT+ C
Sbjct: 501 PCSATCGGGRMVRRRYCDNPSPQHGGKNCSSLGRPVESSSCNTNKC 546
>SB_32784| Best HMM Match : RVT_1 (HMM E-Value=3.9e-26)
Length = 759
Score = 32.3 bits (70), Expect = 0.39
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +2
Query: 230 LQDNYLKYDPSVPQNLQIVEMDSNILDLKESFRYEGEAITAGTLLRWN 373
LQ N+LKY PSVPQ L + S +++ E ++ G I+A L WN
Sbjct: 379 LQINFLKYQPSVPQRL---ILGSAVVEKVEYYKLLGVHISAD--LSWN 421
>SB_30073| Best HMM Match : RVT_1 (HMM E-Value=3e-26)
Length = 416
Score = 32.3 bits (70), Expect = 0.39
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +2
Query: 230 LQDNYLKYDPSVPQNLQIVEMDSNILDLKESFRYEGEAITAGTLLRWN 373
LQ N+LKY PSVPQ L + S +++ E ++ G I+A L WN
Sbjct: 292 LQINFLKYQPSVPQRL---ILGSAVVEKVEYYKLLGVHISAD--LSWN 334
>SB_6320| Best HMM Match : Exo_endo_phos (HMM E-Value=4.8)
Length = 845
Score = 32.3 bits (70), Expect = 0.39
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +2
Query: 230 LQDNYLKYDPSVPQNLQIVEMDSNILDLKESFRYEGEAITAGTLLRWN 373
LQ N+LKY PSVPQ L + S +++ E ++ G I+A L WN
Sbjct: 628 LQINFLKYQPSVPQRL---ILGSAVVEKVEYYKLLGVHISAD--LSWN 670
>SB_41512| Best HMM Match : SAP (HMM E-Value=2.3)
Length = 249
Score = 32.3 bits (70), Expect = 0.39
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +2
Query: 230 LQDNYLKYDPSVPQNLQIVEMDSNILDLKESFRYEGEAITAGTLLRWN 373
LQ N+LKY PSVPQ L + S +++ E ++ G I+A L WN
Sbjct: 55 LQINFLKYQPSVPQRL---ILGSAVVEKVEYYKLLGVHISAD--LSWN 97
>SB_34517| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 32.3 bits (70), Expect = 0.39
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +2
Query: 230 LQDNYLKYDPSVPQNLQIVEMDSNILDLKESFRYEGEAITAGTLLRWN 373
LQ N+LKY PSVPQ L + S +++ E ++ G I+A L WN
Sbjct: 169 LQINFLKYQPSVPQRL---ILGSAVVEKVEYYKLLGVHISAD--LSWN 211
>SB_26251| Best HMM Match : RVT_1 (HMM E-Value=0.0014)
Length = 391
Score = 32.3 bits (70), Expect = 0.39
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +2
Query: 230 LQDNYLKYDPSVPQNLQIVEMDSNILDLKESFRYEGEAITAGTLLRWN 373
LQ N+LKY PSVPQ L + S +++ E ++ G I+A L WN
Sbjct: 241 LQINFLKYQPSVPQRL---ILGSAVVEKVEYYKLLGVHISAD--LSWN 283
>SB_31489| Best HMM Match : Ion_trans (HMM E-Value=0.015)
Length = 382
Score = 31.9 bits (69), Expect = 0.51
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 365 RWNQTDTDIYITSESRLQTDLMIMAIPVNPTL 460
RWNQ D I I S + + M M +P+NPT+
Sbjct: 37 RWNQLDMLIVILSIVGIALEEMTMELPINPTI 68
>SB_20844| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 2675
Score = 31.9 bits (69), Expect = 0.51
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Frame = +2
Query: 350 AGTLLRWNQTDTDIYITSESRLQTDL-----MIMAIPVNPTLEDAVSVDVSVNYSTPTGR 514
AGTL R+ +T+ + S T+ ++ A NP +E S+ SV
Sbjct: 163 AGTLFRYERTEAGKEVISALGPTTEQVHVVGLLTADEPNPGIEYEFSLPKSV-----VVL 217
Query: 515 TRPLEYRWSIER-GPCSASCGGGVRLITAQCHRDQ 616
+ +Y W ++ C+ASC GG ++ C RD+
Sbjct: 218 PKKAKYSWKMDGFSACTASCAGGYQVRRVFCARDR 252
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 515 TRPLEYRWSI-ERGPCSASCGGGVRLITAQCHRDQKCPP 628
TRP + W I PC+ SCG G++ +C D K P
Sbjct: 458 TRPCQAGWYIFPWQPCTRSCGVGLKRRQIKCFADSKEDP 496
>SB_38612| Best HMM Match : TSP_1 (HMM E-Value=3.3e-11)
Length = 900
Score = 31.1 bits (67), Expect = 0.90
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 536 WSIERGPCSASCGGGVRLITAQCHRDQKCPPPRYESCNTHSC 661
++ E PCSA+CG G + + C R+ +Y++ SC
Sbjct: 718 YTTEWSPCSATCGRGTQSRSVICRRETFTGSKQYKTLPDSSC 759
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 536 WSIERGPCSASCGGGVRLITAQC 604
W + CS +CGGGV+ T C
Sbjct: 369 WPADYSTCSYTCGGGVQWKTRTC 391
>SB_3851| Best HMM Match : TSP_1 (HMM E-Value=3.7e-24)
Length = 429
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 6/49 (12%)
Frame = +2
Query: 533 RWSIER-GPCSASCGGGVRLITAQCH-RDQKC----PPPRYESCNTHSC 661
RW+ CS++CG GVR C RD C P Y+ C+ C
Sbjct: 56 RWTAGAWSECSSTCGSGVRTRFVSCKPRDGTCNSEDKPDAYKECDVMEC 104
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 536 WSIER-GPCSASCGGGVRLITAQCHRDQKCPPPRYESCNT 652
WS+ + CS +CG G RL + C KC R S +T
Sbjct: 107 WSVGQWSSCSVTCGVGRRLRSVVCSIHGKCDKQRQPSSST 146
>SB_48913| Best HMM Match : TSP_1 (HMM E-Value=1.8e-11)
Length = 1068
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +2
Query: 536 WSIERGPCSASCGGGVRLITAQCHRDQKCPPPRYESCNTHSC 661
++ E PCSA+CG G + + C R+ +Y++ + +C
Sbjct: 749 YTTEWSPCSATCGKGTQSRSVICRRETFTGSMQYKTLSDSNC 790
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 536 WSIERGPCSASCGGGVRLITAQC 604
WS + CS +CGGGV+ T C
Sbjct: 432 WSADYSTCSYTCGGGVQWKTRTC 454
>SB_59407| Best HMM Match : Toxin_4 (HMM E-Value=4.4)
Length = 49
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 536 WSIERGPCSASCGGGVRLITAQC 604
WS + CS +CGGGV+ T C
Sbjct: 23 WSADYSTCSYTCGGGVQWKTRTC 45
>SB_45040| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 8/51 (15%)
Frame = +2
Query: 551 GPCSASCGGGVRLITAQC------HRDQKCPPPRYE--SCNTHSCEFVWGF 679
G C SCGGG R +C + ++C P + SCN+ C G+
Sbjct: 292 GDCDKSCGGGARTRKRECTNPAPAYGGKQCDGPHTDTMSCNSQPCPVNGGY 342
>SB_57496| Best HMM Match : TSP_1 (HMM E-Value=3.2e-13)
Length = 609
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 6/41 (14%)
Frame = +2
Query: 557 CSASCGGGVRLITAQCHRDQ---KCPPP---RYESCNTHSC 661
C+ +CGGG R T +CH + KC + CNT C
Sbjct: 261 CTKTCGGGWRKRTRRCHTTEPGKKCDQDLLIGIQVCNTQPC 301
>SB_56622| Best HMM Match : ImpA-rel_N (HMM E-Value=1)
Length = 529
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +2
Query: 230 LQDNYLKYDPSVPQNLQIVEMDSNILDLKESFRYEGEAITAGTLLRWN 373
LQ N+LKY SVPQ L + S +++ E ++ G I+A L WN
Sbjct: 113 LQINFLKYQHSVPQRL---ILGSAVVEKVEHYKLLGVHISAD--LSWN 155
>SB_44951| Best HMM Match : TSP_1 (HMM E-Value=3.2e-13)
Length = 366
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 6/41 (14%)
Frame = +2
Query: 557 CSASCGGGVRLITAQCHRDQ---KCPPP---RYESCNTHSC 661
C+ +CGGG R T +CH + KC + CNT C
Sbjct: 261 CTKTCGGGWRKRTRRCHTTEPGKKCDQDLLIGIQVCNTQPC 301
>SB_25565| Best HMM Match : TSP_1 (HMM E-Value=0.0032)
Length = 88
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +2
Query: 521 PLEYRWS-IERGPCSASCGGGVRLITAQCHRDQKCPPPRYESC 646
P Y W + CS CGGG++ C+R + +Y+ C
Sbjct: 25 PTVYVWRPVGWSECSVPCGGGMQKRIYDCYRKKDSMMVKYKLC 67
>SB_534| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 948
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +2
Query: 230 LQDNYLKYDPSVPQNLQIVEMDSNILDLKESFRYEGEAITAGTLLRWN 373
LQ N+LKY SVPQ L + S +++ E ++ G I+A L WN
Sbjct: 302 LQINFLKYQHSVPQRL---ILGSAVVEKVEHYKLLGVHISAD--LSWN 344
>SB_24894| Best HMM Match : TSP_1 (HMM E-Value=1.8e-10)
Length = 171
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 7/53 (13%)
Frame = +2
Query: 506 TGRTRPLEYRWSIERG--PCSASCGGGVRLITAQCHR-----DQKCPPPRYES 643
T R P WS CS +CG GV T CH KCP P E+
Sbjct: 109 TKRCNPAHGGWSSWGAWHACSKTCGKGVTYRTRTCHNGYYHYPHKCPGPDKET 161
>SB_2401| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 818
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 7/73 (9%)
Frame = +2
Query: 476 VDVSVNYSTPTGRTRPLEYRWSIERGPCSASCGGGV--RLITAQ-----CHRDQKCPPPR 634
+++ ++ST R R S++ PCS SCG GV TA+ C K
Sbjct: 228 LNIGGDWSTYVYMLRKSRGRRSLDT-PCSKSCGSGVSSTYTTAEMTGDKCQAGTKKVIIH 286
Query: 635 YESCNTHSCEFVW 673
++CNT C W
Sbjct: 287 TKACNTDPCPDAW 299
>SB_50658| Best HMM Match : Pox_D2 (HMM E-Value=4.7)
Length = 175
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -1
Query: 283 NLKILRHARIVFQVVVLKGADVEFFGVLRKF*N 185
+LK L H R+VF++ ++ DV + + +K+ N
Sbjct: 35 DLKKLMHQRVVFKIKAIRSKDVNDWKIFKKYRN 67
>SB_45039| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 235
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 10/60 (16%)
Frame = +2
Query: 536 WSIERGPCSASCGGGVRLITAQC------HRDQKC----PPPRYESCNTHSCEFVWGF*R 685
WS E C SCGGGVR + C H ++C SCN + C G+ R
Sbjct: 95 WS-EYSECDKSCGGGVRTRSRDCQNPPAQHGGKECEHGFTQKETTSCNPNPCPVDGGYSR 153
>SB_45005| Best HMM Match : RVT_1 (HMM E-Value=6.6e-32)
Length = 871
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -1
Query: 283 NLKILRHARIVFQVVVLKGADVEFFGVLRKF*N 185
+LK L H R+VF++ ++ DV + + +K+ N
Sbjct: 363 DLKKLMHQRVVFKIKAIRSKDVNDWKIFKKYRN 395
>SB_40851| Best HMM Match : TSP_1 (HMM E-Value=3.4e-09)
Length = 925
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 6/44 (13%)
Frame = +2
Query: 536 WSIERGPCSASCGGGVRLITAQCHR------DQKCPPPRYESCN 649
WS E CS SC GG++ T C ++CP P E N
Sbjct: 640 WS-EFSQCSKSCDGGIKTRTRTCTNPSPSGGGRECPGPNTEEVN 682
>SB_12543| Best HMM Match : TSP_1 (HMM E-Value=1.4e-07)
Length = 379
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 7/50 (14%)
Frame = +2
Query: 533 RWSIERGPCSASCGGG----VRLITAQCHRDQKCPPPRYES---CNTHSC 661
+WS G CS+ CGGG R IT CP ++ CNT C
Sbjct: 41 QWS-SWGDCSSHCGGGTQIRTRRITTPASCGGGCPSYSFQDIRRCNTQCC 89
>SB_32444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 836
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 533 RWSIERGPCSASCGGGVRLITAQCHRDQKC 622
+WS GPCS+ CG GV ++ R +C
Sbjct: 483 KWS-GYGPCSSDCGQGVCAFGSKTSRQTQC 511
>SB_12085| Best HMM Match : TBP (HMM E-Value=3.5e-35)
Length = 440
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 8/56 (14%)
Frame = +2
Query: 536 WSIERGPCSASCGGGVRLITAQCHR------DQKCPPPRYE--SCNTHSCEFVWGF 679
WS E G C SCG GV+ C + C E +CNTH C GF
Sbjct: 94 WS-EFGNCDKSCGRGVQKRVRTCTNPSPLFGGKDCAGAMEETKACNTHPCPVNGGF 148
>SB_6989| Best HMM Match : LRR_1 (HMM E-Value=0.074)
Length = 180
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 346 HGWDSSALESNRHRHLYNVRI*TANRFDDN 435
HGW ++A + LY+ + T +RFD N
Sbjct: 32 HGWSNTATDPVSRLSLYHTSVYTQSRFDFN 61
>SB_19793| Best HMM Match : TSP_1 (HMM E-Value=0.0027)
Length = 384
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 557 CSASCGGGVRLITAQCHRDQKCPPPR 634
CS +CGGGVR HR ++C P+
Sbjct: 135 CSRTCGGGVR------HRSRRCDNPK 154
>SB_11766| Best HMM Match : Reprolysin (HMM E-Value=1.6e-08)
Length = 469
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 557 CSASCGGGVRLITAQCHRDQKCPPPR 634
CS +CGGGVR HR ++C P+
Sbjct: 450 CSRTCGGGVR------HRSRRCENPK 469
>SB_7655| Best HMM Match : p450 (HMM E-Value=0)
Length = 580
Score = 27.9 bits (59), Expect = 8.4
Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
Frame = +2
Query: 161 RERKRDKPILELSKHSKKFDISSLQDNYLKYDPSVPQNLQ--IVEMDSNILDLKESFRYE 334
R+R DK LE + I L D +LK V + + I E+ + + + + Y
Sbjct: 324 RDRLLDKFFLEHKSTFSEDCIRDLTDAFLKAKLEVEREDKKAIGEVTDDHITMLMTDVYV 383
Query: 335 GEAITAGTLLRWNQTDTDIYITSESRLQTDL 427
G T T L W Y ++RLQTD+
Sbjct: 384 GGLETTSTTLSWLAAYLINYPLVQTRLQTDI 414
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,984,551
Number of Sequences: 59808
Number of extensions: 466234
Number of successful extensions: 1387
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 1157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1369
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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