Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0129
(663 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 188 4e-48
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 188 4e-48
SB_56| Best HMM Match : Actin (HMM E-Value=0) 188 4e-48
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 188 4e-48
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 188 4e-48
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 106 1e-23
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 104 6e-23
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 4e-21
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 91 7e-19
SB_54| Best HMM Match : Actin (HMM E-Value=0) 89 4e-18
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 61 7e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 55 6e-08
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 52 6e-07
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 51 7e-07
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 36 0.029
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 33 0.21
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 33 0.27
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 33 0.27
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 33 0.27
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 32 0.36
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.48
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.63
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.63
SB_58292| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 31 0.84
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 31 1.1
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 31 1.1
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 31 1.1
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 31 1.1
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 31 1.1
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 31 1.1
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_48166| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 30 1.9
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 29 2.6
SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_36120| Best HMM Match : zf-MIZ (HMM E-Value=3.9) 29 3.4
SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0) 29 3.4
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 29 3.4
SB_15607| Best HMM Match : zf-MIZ (HMM E-Value=3.9) 29 3.4
SB_59500| Best HMM Match : RVT_1 (HMM E-Value=0.015) 29 3.4
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0) 29 3.4
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 4.5
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_20112| Best HMM Match : EGF (HMM E-Value=0) 28 5.9
SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 28 5.9
SB_4319| Best HMM Match : Na_H_Exchanger (HMM E-Value=0.0059) 28 5.9
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 28 5.9
SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_46483| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_38236| Best HMM Match : YiaAB (HMM E-Value=3.2) 28 7.8
SB_35376| Best HMM Match : RVT_1 (HMM E-Value=0) 28 7.8
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 28 7.8
SB_21844| Best HMM Match : RVT_1 (HMM E-Value=0) 28 7.8
SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_36891| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_34718| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 28 7.8
SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_20903| Best HMM Match : Extensin_2 (HMM E-Value=0.3) 28 7.8
SB_19106| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_15668| Best HMM Match : Chorion_3 (HMM E-Value=2.5) 28 7.8
SB_15222| Best HMM Match : Glycoprotein_G (HMM E-Value=0.84) 28 7.8
SB_12811| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_12274| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 188 bits (458), Expect = 4e-48
Identities = 85/90 (94%), Positives = 87/90 (96%)
Frame = +1
Query: 241 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 420
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 421 APLNPKANREKMTQIMFETFNTPAMYVAIQ 510
APLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVAIQ 138
Score = 108 bits (259), Expect = 5e-24
Identities = 49/52 (94%), Positives = 51/52 (98%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 253
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 105 bits (253), Expect = 2e-23
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +3
Query: 510 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 662
AVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDY
Sbjct: 139 AVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDY 189
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 188 bits (458), Expect = 4e-48
Identities = 85/90 (94%), Positives = 87/90 (96%)
Frame = +1
Query: 241 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 420
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 107
Query: 421 APLNPKANREKMTQIMFETFNTPAMYVAIQ 510
APLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 108 APLNPKANREKMTQIMFETFNSPAMYVAIQ 137
Score = 106 bits (255), Expect = 1e-23
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +3
Query: 510 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 662
AVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDY
Sbjct: 138 AVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 188
Score = 105 bits (252), Expect = 3e-23
Identities = 47/50 (94%), Positives = 50/50 (100%)
Frame = +2
Query: 104 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 253
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 51
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 188 bits (458), Expect = 4e-48
Identities = 85/90 (94%), Positives = 87/90 (96%)
Frame = +1
Query: 241 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 420
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 107
Query: 421 APLNPKANREKMTQIMFETFNTPAMYVAIQ 510
APLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 108 APLNPKANREKMTQIMFETFNSPAMYVAIQ 137
Score = 106 bits (255), Expect = 1e-23
Identities = 48/50 (96%), Positives = 50/50 (100%)
Frame = +2
Query: 104 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 253
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 51
Score = 106 bits (255), Expect = 1e-23
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +3
Query: 510 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 662
AVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDY
Sbjct: 138 AVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 188
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 188 bits (458), Expect = 4e-48
Identities = 85/90 (94%), Positives = 87/90 (96%)
Frame = +1
Query: 241 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 420
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 421 APLNPKANREKMTQIMFETFNTPAMYVAIQ 510
APLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVAIQ 138
Score = 112 bits (270), Expect = 2e-25
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 253
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 106 bits (255), Expect = 1e-23
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +3
Query: 510 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 662
AVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDY
Sbjct: 139 AVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 189
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 188 bits (458), Expect = 4e-48
Identities = 85/90 (94%), Positives = 87/90 (96%)
Frame = +1
Query: 241 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 420
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 421 APLNPKANREKMTQIMFETFNTPAMYVAIQ 510
APLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVAIQ 138
Score = 108 bits (259), Expect = 5e-24
Identities = 47/52 (90%), Positives = 51/52 (98%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 253
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 64.1 bits (149), Expect = 1e-10
Identities = 31/35 (88%), Positives = 33/35 (94%), Gaps = 2/35 (5%)
Frame = +3
Query: 510 AVLSLYASGRTTGIVLDSGDGVSHTVPIYE--GYA 608
AVLSLYASGRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 139 AVLSLYASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 106 bits (255), Expect = 1e-23
Identities = 47/50 (94%), Positives = 50/50 (100%)
Frame = +2
Query: 104 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 253
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 51
Score = 105 bits (253), Expect = 2e-23
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +3
Query: 510 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 662
AVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDY
Sbjct: 101 AVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDY 151
Score = 80.2 bits (189), Expect = 1e-15
Identities = 36/43 (83%), Positives = 37/43 (86%)
Frame = +1
Query: 241 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 369
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +1
Query: 442 NREKMTQIMFETFNTPAMYVAIQ 510
N + M +IMFETFN+PAMYVAIQ
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQ 100
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 104 bits (250), Expect = 6e-23
Identities = 48/51 (94%), Positives = 49/51 (96%)
Frame = +3
Query: 510 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 662
AVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLAGRDLTDY
Sbjct: 17 AVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDY 67
Score = 31.9 bits (69), Expect = 0.48
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +1
Query: 463 IMFETFNTPAMYVAIQ 510
IMFE FN+PA+YVAIQ
Sbjct: 1 IMFEAFNSPAVYVAIQ 16
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 98.7 bits (235), Expect = 4e-21
Identities = 45/98 (45%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Frame = +1
Query: 220 SGRDGRYGTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPE 396
S + G + L VGDEA R +L + YP+++GIV NWDDM+ +W +TF +++ + P
Sbjct: 44 SQKVGDIEVKDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPR 103
Query: 397 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 510
VLLTE PLNP NREKM ++MFE + +Y+AIQ
Sbjct: 104 NTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQ 141
Score = 81.0 bits (191), Expect = 8e-16
Identities = 34/51 (66%), Positives = 42/51 (82%)
Frame = +3
Query: 510 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 662
AVL+LYA G TG+V+DSGDGV+H P+YEG+ALPH RLD+AGRD+T Y
Sbjct: 142 AVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDITKY 192
Score = 44.4 bits (100), Expect = 8e-05
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +2
Query: 116 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 214
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 91.1 bits (216), Expect = 7e-19
Identities = 38/51 (74%), Positives = 49/51 (96%)
Frame = +3
Query: 510 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 662
AVLSLYA+GRTTG+VLD+GDGVSH+VPIYEG+A+PH+I+R D+AGRD++ Y
Sbjct: 164 AVLSLYATGRTTGVVLDAGDGVSHSVPIYEGFAMPHSIMRTDIAGRDVSRY 214
Score = 63.3 bits (147), Expect = 2e-10
Identities = 24/38 (63%), Positives = 33/38 (86%)
Frame = +1
Query: 397 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 510
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++Q
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQ 163
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 88.6 bits (210), Expect = 4e-18
Identities = 39/51 (76%), Positives = 44/51 (86%)
Frame = +3
Query: 510 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 662
AV++LYASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT Y
Sbjct: 2183 AVMALYASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHY 2233
Score = 82.2 bits (194), Expect = 3e-16
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = +1
Query: 349 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 510
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+Q
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQ 2182
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +2
Query: 122 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 223
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 61.3 bits (142), Expect = 7e-10
Identities = 24/65 (36%), Positives = 42/65 (64%)
Frame = +1
Query: 307 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 486
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 487 PAMYV 501
PA ++
Sbjct: 63 PAFFL 67
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/49 (44%), Positives = 35/49 (71%)
Frame = +3
Query: 510 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 656
+VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T
Sbjct: 71 SVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFIT 119
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 223
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 54.8 bits (126), Expect = 6e-08
Identities = 29/66 (43%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +1
Query: 223 GRDGRYGTEGL--YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 396
GR + G E L ++GDEA K T K+PI H IV +WD ME+ W + LR PE
Sbjct: 273 GRSAK-GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPE 330
Query: 397 EHPVLL 414
+H LL
Sbjct: 331 DHYFLL 336
Score = 32.3 bits (70), Expect = 0.36
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 543 TGIVLDSGDGVSHTVPI 593
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 51.6 bits (118), Expect = 6e-07
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +3
Query: 543 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 656
TG V+DSGDGV+H +P+ EGY + I + +AGRD+T
Sbjct: 62 TGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 99
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 51.2 bits (117), Expect = 7e-07
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +2
Query: 92 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 238
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
Score = 48.4 bits (110), Expect = 5e-06
Identities = 22/48 (45%), Positives = 29/48 (60%)
Frame = +3
Query: 516 LSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 659
LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+
Sbjct: 770 LSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTE 817
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -3
Query: 220 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 104
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +1
Query: 223 GRDGRYGTEGLYVGDEAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 393
GR G + GL VG++ S I L+ P + +VT+++ E++ H F + P
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164
Query: 394 EEHPVLLTEAPLNPKANRE 450
HPV++TE NP R+
Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 35.9 bits (79), Expect = 0.029
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +1
Query: 253 LYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 378
L++GD+ + + L Y P + G + NWD ++IW +TF E
Sbjct: 272 LFIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +2
Query: 110 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV-GRPRHQGVMVGMGQKDC 256
++A LV+D G+ K GFA + APR++ +I + + + +G ++C
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSIPNAIFKAKSERRKLFIGDQIEEC 281
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 33.1 bits (72), Expect = 0.21
Identities = 24/87 (27%), Positives = 31/87 (35%)
Frame = +1
Query: 403 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQPCSRCTRPVVPPVSCWTPATVSPT 582
P T P P T +T TP P P P + TP T +PT
Sbjct: 29 PTPTTHTPTKPSPTTPTSTAPT-QTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPT 87
Query: 583 PCPSTRDTHSPTPSCVWT*PVATSQTT 663
T+ T + TP+ P A + TT
Sbjct: 88 TSTLTKPTPATTPTPTKPTPTAHTPTT 114
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 541 PPVSCWTPATVSPTPCPSTRDTHSPT-PSCVWT*PVATSQTT 663
P ++ TP T +PTP T TH+PT PS A +QTT
Sbjct: 13 PTLTKATPQT-TPTPTKPTPTTHTPTKPSPTTPTSTAPTQTT 53
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = -3
Query: 286 LFCSVPRLLRTVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
L C +++ V+LSH + H M D +HG RS SCET L T
Sbjct: 213 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = -3
Query: 286 LFCSVPRLLRTVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
L C +++ V+LSH + H M D +HG RS SCET L T
Sbjct: 408 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = -3
Query: 286 LFCSVPRLLRTVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
L C +++ V+LSH + H M D +HG RS SCET L T
Sbjct: 271 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = -3
Query: 286 LFCSVPRLLRTVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
L C +++ V+LSH + H M D +HG RS SCET L T
Sbjct: 249 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = -3
Query: 286 LFCSVPRLLRTVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
L C +++ V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = -3
Query: 286 LFCSVPRLLRTVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
L C +++ V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = -3
Query: 286 LFCSVPRLLRTVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
L C +++ V+LSH + H M D +HG RS SCET L T
Sbjct: 125 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 32.3 bits (70), Expect = 0.36
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = -3
Query: 286 LFCSVPRLLRTVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
L C +++ ++LSH + H M D +HG RS SCET L T
Sbjct: 173 LTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 31.9 bits (69), Expect = 0.48
Identities = 17/65 (26%), Positives = 25/65 (38%)
Frame = +1
Query: 421 APLNPKANREKMTQIMFETFNTPAMYVAIQPCSRCTRPVVPPVSCWTPATVSPTPCPSTR 600
A P A + + +NTP ++ P P +PP + TP+ P P PS
Sbjct: 888 ASYQPSAPSSMPAPVPLQPYNTPMPPISSTPYQ--APPTLPPTTLTTPSWSQPVPVPSMY 945
Query: 601 DTHSP 615
P
Sbjct: 946 QPQPP 950
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.63
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 195 GNTARGASSPAKPALHIPEPLSTT 124
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.63
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 195 GNTARGASSPAKPALHIPEPLSTT 124
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_58292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 31.1 bits (67), Expect = 0.84
Identities = 27/91 (29%), Positives = 36/91 (39%), Gaps = 5/91 (5%)
Frame = +1
Query: 403 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQPCSRCTRPVV---PPVSCWTPATV 573
P L+T PL +T NTP + P T P+V PP+ TP V
Sbjct: 34 PSLVTTTPLLVTTTPSLVTTTPLLVTNTPPLDTTTLPLVTITPPLVITAPPLVTTTPPLV 93
Query: 574 SPTP--CPSTRDTHSPTPSCVWT*PVATSQT 660
+ TP +T + TP V T P + T
Sbjct: 94 TTTPLLVTTTPFLVTTTPPLVTTTPSLVTTT 124
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 31.1 bits (67), Expect = 0.84
Identities = 27/96 (28%), Positives = 37/96 (38%)
Frame = +1
Query: 376 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQPCSRCTRPVVPPVSC 555
E APE L E + P+A T ++ +T P ++P +P P
Sbjct: 227 ETTTAPETTMAL--ETTVAPEATMAPETTVVPDTTVEPETSTTLKPTDVTEKPEASPA-- 282
Query: 556 WTPATVSPTPCPSTRDTHSPTPSCVWT*PVATSQTT 663
TPA S TP T +P T ATS +T
Sbjct: 283 -TPAEYSTTPSVQPELTEAPQTDYPTTASPATSPST 317
Score = 28.7 bits (61), Expect = 4.5
Identities = 29/101 (28%), Positives = 41/101 (40%), Gaps = 8/101 (7%)
Frame = +1
Query: 376 ELRVAPEEHPVL-LTEAP---LNPKANREKMTQIMFETFNTPAMYVAIQPCSRCTRPVVP 543
E APE V T AP + P+ +T + ET PA A++ + +VP
Sbjct: 1323 ETSAAPETTMVPETTSAPSTTMAPETTAAPVTTMAPETTAVPATIAALETTATLETTMVP 1382
Query: 544 PVSCWTPATVSP--TPCPSTRDTHSPT--PSCVWT*PVATS 654
+ + TV+P T P+T T P W P TS
Sbjct: 1383 ETTASSETTVAPETTDAPATTLAPETTAAPETTWA-PETTS 1422
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -3
Query: 286 LFCSVPRLLRTVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
L C +++ ++LSH + H L A +HG R +SCET L T
Sbjct: 242 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Frame = +1
Query: 523 CTRPVVPPVSCWTPATVSPTPC-----PSTRDTHSP 615
CT+ +P +TP T TPC PST +H+P
Sbjct: 859 CTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAP 894
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +1
Query: 457 TQIMFETFNTPAMYVAIQPCSRCTRPVVPPVSCWTPATVSPTPCPS--TRDTHSPTP 621
+Q+ E +N P+ + + CT +P +TP T TP T T TP
Sbjct: 611 SQVNSERYNAPSQSPCTERYTPCTERYIPCTERYTPCTERYTPSTERYTPSTERYTP 667
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -3
Query: 286 LFCSVPRLLRTVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
L C +++ ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -3
Query: 286 LFCSVPRLLRTVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
L C +++ ++LSH + H L A +HG R +SCET L T
Sbjct: 1641 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -3
Query: 286 LFCSVPRLLRTVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
L C +++ ++LSH + H L A +HG R +SCET L T
Sbjct: 669 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -3
Query: 286 LFCSVPRLLRTVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
L C +++ ++LSH + H L A +HG R +SCET L T
Sbjct: 224 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -3
Query: 286 LFCSVPRLLRTVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
L C +++ ++LSH + H L A +HG R +SCET L T
Sbjct: 1079 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -3
Query: 286 LFCSVPRLLRTVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
L C +++ ++LSH + H L A +HG R +SCET L T
Sbjct: 22 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -3
Query: 286 LFCSVPRLLRTVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 143
L C +++ ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 195 GNTARGASSPAKPALHIPEPLSTT 124
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_48166| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
Frame = +1
Query: 448 EKMTQIMFETFNTPAMYVAIQPCSR----CTRPVVPP-VSCWTPATVSPTPC 588
+K T + F TP++ P S T P VPP V+ P T +P PC
Sbjct: 188 DKQTDVCHLIFPTPSLGTQAPPPSTGGVTLTTPTVPPRVASTEPTTFTPKPC 239
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +1
Query: 511 PCSRCTRPVVPPVSCWTPATVSPTP-CPSTRDTHSPTPS--CVWT*PVATSQTT 663
P +R P+ PP C + V PTP S++ + SP+PS C ++ TS T
Sbjct: 325 PTTRTFSPISPPAGC-AASPVPPTPPAISSKRSFSPSPSTFCHYSTEKITSSRT 377
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 29.9 bits (64), Expect = 1.9
Identities = 27/93 (29%), Positives = 32/93 (34%), Gaps = 5/93 (5%)
Frame = +1
Query: 361 HTFYNELRVAP--EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQPCSRCTRP 534
HT N AP HP L P+A +T M + P S T P
Sbjct: 276 HTISNPAMAAPWVTPHPATLPVTLFTPQA--APVTPPMGAQLPETEQPQMVAPSSTVTPP 333
Query: 535 VV---PPVSCWTPATVSPTPCPSTRDTHSPTPS 624
V PP S P PTP + +P PS
Sbjct: 334 VTEPAPPSSVVAPPPAVPTPATAPPPVVAPPPS 366
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 511 PCSRCTRPVVPPVSCWTPATVSPTPCPSTRD--THSPTPSCVWT*PVATSQTT 663
P +R T P P + PAT +PT +T T +PT T P T+ TT
Sbjct: 40 PHNRTTTPTTPTTTT-PPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTT 91
>SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1584
Score = 29.5 bits (63), Expect = 2.6
Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 11/77 (14%)
Frame = +1
Query: 415 TEAPLNPKANR---EKMTQIMFETFNTPAMYVAIQPCSRCTRPVVPPVSCWTPATV---- 573
TEA +PKAN+ +K + + + A PC+ P PPV PA +
Sbjct: 1336 TEAGKHPKANKVGKDKHNKGTKKCYGACAPPPMADPCATMAAPCAPPVMMAAPAPMLAPM 1395
Query: 574 ---SPTPC-PSTRDTHS 612
P PC P THS
Sbjct: 1396 LAPMPAPCAPPECHTHS 1412
>SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 650
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
Frame = +1
Query: 484 TPAMYVAIQPCSRCTRPVVPPV-SCWTPATVS-PTPCPS---TRDTHSPTPS 624
TP+ Y QP T P PP S + P S P PS T ++ PTPS
Sbjct: 189 TPSSYPPTQPSYPPTAPSYPPTPSSYPPIAASYPPTAPSYNPTAPSYPPTPS 240
>SB_36120| Best HMM Match : zf-MIZ (HMM E-Value=3.9)
Length = 209
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = -3
Query: 286 LFCSVPRLLRTVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 116
L C +++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 93 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 151
Query: 115 NFFVAHLE 92
V L+
Sbjct: 152 QVDVLLLD 159
>SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 522
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = -3
Query: 286 LFCSVPRLLRTVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 116
L C +++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 93 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 151
Query: 115 NFFVAHLE 92
V L+
Sbjct: 152 QVDVLLLD 159
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = -3
Query: 280 CSVPRLLRTVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRGNF 110
C ++++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 465 CLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHGQV 523
Query: 109 FVAHLE 92
V L+
Sbjct: 524 DVLLLD 529
>SB_15607| Best HMM Match : zf-MIZ (HMM E-Value=3.9)
Length = 221
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = -3
Query: 286 LFCSVPRLLRTVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 116
L C +++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 126 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 184
Query: 115 NFFVAHLE 92
V L+
Sbjct: 185 QVDVLLLD 192
>SB_59500| Best HMM Match : RVT_1 (HMM E-Value=0.015)
Length = 224
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = -3
Query: 286 LFCSVPRLLRTVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 116
L C +++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 43 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 101
Query: 115 NFFVAHLE 92
V L+
Sbjct: 102 QVDVLLLD 109
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 523 CTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 624
C+RP PPV+ T +T S T +T T + TP+
Sbjct: 620 CSRPTTPPVTT-TKSTTSSTTKGTTASTTTSTPT 652
>SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1676
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = -3
Query: 286 LFCSVPRLLRTVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 116
L C +++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 715 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 773
Query: 115 NFFVAHLE 92
V L+
Sbjct: 774 QVDVLLLD 781
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +1
Query: 511 PCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 624
P + TRP VP +T PTP P T P P+
Sbjct: 927 PPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPA 964
>SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1176
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = -3
Query: 286 LFCSVPRLLRTVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 116
L C +++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 799 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 857
Query: 115 NFFVAHLE 92
V L+
Sbjct: 858 QVDVLLLD 865
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/51 (33%), Positives = 20/51 (39%)
Frame = +1
Query: 475 TFNTPAMYVAIQPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSC 627
T NT + A C R T VPPVS +P PC P +C
Sbjct: 629 TDNTRTRFKAFGECGRTT---VPPVSTSSPTPTPQDPCTGFNCDTPPYSTC 676
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 195 GNTARGASSPAKPALHIPEPLSTT 124
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_20112| Best HMM Match : EGF (HMM E-Value=0)
Length = 2112
Score = 28.3 bits (60), Expect = 5.9
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +1
Query: 394 EEHPVLLTEAPLNPKANREKMTQIMF-ETFNTPAMYVAIQPCSRCTRPVVPPVSCWTPAT 570
EEH ++ T N ++ + MF E +TP + S + P P+S TP+
Sbjct: 2034 EEHVMMETTLHHNNQSMCVPVESGMFREKHHTPPSAHSYGTSSYDSSPQKLPISYLTPSP 2093
Query: 571 VSPTPCPSTRDTHSPTPSC 627
SP S+ +HS +C
Sbjct: 2094 ESPKDWSSSPSSHSDWSNC 2112
>SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 286
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +1
Query: 526 TRPVVPPVSCWTPA--TVSPTPCPSTRDTHSPTPSCVWT*PVATSQT 660
T P + TP T +PT +T +T + TP+ T P AT+ T
Sbjct: 162 TTTTTPNTTTTTPTATTTTPTATTTTPNTTTNTPNATTTTPTATTTT 208
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 195 GNTARGASSPAKPALHIPEPLSTT 124
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Frame = +3
Query: 405 CPAH*G---SPQPQGQQREDDPDHVRNIQHARHVRRHPA 512
CP G SP P+ R D+P V A HV HP+
Sbjct: 256 CPGEEGKTISPTPKRCVRFDEPPTVEKYSKASHVTEHPS 294
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 526 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 630
T VVPP+ P V P+P + SPTPSC+
Sbjct: 207 TPAVVPPI----PTLVVPSPLTQP-EVESPTPSCI 236
>SB_4319| Best HMM Match : Na_H_Exchanger (HMM E-Value=0.0059)
Length = 410
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -2
Query: 515 HGWMATYMAGVLNVSNMIWVIFSLLALGLRGASVS 411
+GW A + + ++W+ F L GL GA VS
Sbjct: 347 YGWGKQGKAPIAQATALLWMFFEPLLFGLVGAEVS 381
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/50 (28%), Positives = 19/50 (38%)
Frame = +1
Query: 475 TFNTPAMYVAIQPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 624
T T A P + T P P + TP T + TP +P P+
Sbjct: 123 TAPTTAATTPTTPTTAPTTPTTPTTAATTPTTAATTPAAGAAAAAAPPPA 172
>SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1065
Score = 27.9 bits (59), Expect = 7.8
Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +1
Query: 382 RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQPCSRCTRPVVPPVSCWT 561
++A + +P + E N K + +K+ Q M +T + + R + W
Sbjct: 866 KIASKHNPEMTEEMRANLKEHLDKINQRMNDTMTL------LYNMPKIMRKFAFELPNWA 919
Query: 562 PATVSPTPCPSTRDTHSP-TPSCV 630
P PT P+ + T +P TPS V
Sbjct: 920 PKIPLPTEPPTEKMTEAPTTPSAV 943
>SB_46483| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -3
Query: 286 LFCSVPRLLRTVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 152
L C +++ ++LSH + H D +HG RS SCET L
Sbjct: 129 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 172
>SB_38236| Best HMM Match : YiaAB (HMM E-Value=3.2)
Length = 177
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -2
Query: 515 HGWMATYMAGVLNVSNMIWVIFSLLALGLRGASVS 411
HGW A V ++W F L GL GA V+
Sbjct: 44 HGWGDDEKAAVSRAMAVLWEFFQPLLFGLIGAEVT 78
>SB_35376| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 931
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -3
Query: 286 LFCSVPRLLRTVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 152
L C +++ ++LSH + H D +HG RS SCET L
Sbjct: 470 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 513
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 27.9 bits (59), Expect = 7.8
Identities = 21/73 (28%), Positives = 27/73 (36%)
Frame = +1
Query: 403 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQPCSRCTRPVVPPVSCWTPATVSPT 582
PVL A P A + TQ + P ++ + P PPV P TV P
Sbjct: 22 PVLTEAATTQPPAPPPEPTQAPVADTDPPTNPPSVVEVTTTQAPPPPPVVTEAPTTV-PP 80
Query: 583 PCPSTRDTHSPTP 621
P + T P P
Sbjct: 81 PVVTDAPTTVPPP 93
>SB_21844| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 411
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -3
Query: 286 LFCSVPRLLRTVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 152
L C +++ ++LSH + H D +HG RS SCET L
Sbjct: 78 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 121
>SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2529
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -3
Query: 286 LFCSVPRLLRTVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 152
L C +++ ++LSH + H D +HG RS SCET L
Sbjct: 1196 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 1239
>SB_36891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2124
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -3
Query: 286 LFCSVPRLLRTVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 152
L C +++ ++LSH + H D +HG RS SCET L
Sbjct: 1860 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 1903
>SB_34718| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 322
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 535 VVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT*PVATSQT 660
V +S +P T + P + +T P+PS T P AT+ T
Sbjct: 4 VTSTLSAGSPVTAPSSTRPPSPNTRPPSPSTTATLPSATNST 45
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 27.9 bits (59), Expect = 7.8
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +1
Query: 415 TEAP---LNPKANREKMTQIMFETFNTPAMYVAIQPCSRCTRPVVPPVSCWTPATVSPTP 585
T+AP L PK T + ET + PA+ +A + + V P + TV+P
Sbjct: 515 TDAPATTLAPKTTIAPETTVAQETTDAPAITMAPETSAAPETTVAPETNAAPETTVAPEI 574
Query: 586 CPSTRDTHSP 615
+T T +P
Sbjct: 575 TAATEITAAP 584
>SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 788
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -3
Query: 286 LFCSVPRLLRTVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 152
L C +++ ++LSH + H D +HG RS SCET L
Sbjct: 180 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 223
>SB_20903| Best HMM Match : Extensin_2 (HMM E-Value=0.3)
Length = 713
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +1
Query: 508 QPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 621
+PC T P PP + W+P + P P D PTP
Sbjct: 235 EPCFTKTEPPAPPSNYWSP-PMQPMQQP---DQEQPTP 268
>SB_19106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 217
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -3
Query: 286 LFCSVPRLLRTVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 152
L C +++ ++LSH + H D +HG RS SCET L
Sbjct: 70 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 113
>SB_15668| Best HMM Match : Chorion_3 (HMM E-Value=2.5)
Length = 276
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +1
Query: 508 QPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 621
+PC T P PP + W+P + P P D PTP
Sbjct: 169 EPCFTKTEPPAPPSNYWSP-PMQPMQQP---DQEQPTP 202
>SB_15222| Best HMM Match : Glycoprotein_G (HMM E-Value=0.84)
Length = 244
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Frame = +1
Query: 529 RPVVPPVSCWTPATVS---PTPCPSTRDTHSPT--PSCVWT*PVATSQTT 663
+P PPV+ P T S PT P+T T PT P+ + T T TT
Sbjct: 151 QPTEPPVTTPVPTTESTAVPTTAPTTEPTTVPTTIPTTIPTTVPTTEPTT 200
>SB_12811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1254
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +1
Query: 490 AMYVAIQPCSRC--TRPVVPPVSCWTPATVSPTPCPSTRDTHSPT 618
A Y I +RC TRP P S P ++ +TR +H PT
Sbjct: 14 AYYQTISQSNRCVTTRPSHTPTSALLPDHLTRQQVRTTRPSHMPT 58
>SB_12274| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -3
Query: 286 LFCSVPRLLRTVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 152
L C +++ ++LSH + H D +HG RS SCET L
Sbjct: 148 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 191
>SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -3
Query: 286 LFCSVPRLLRTVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 152
L C +++ ++LSH + H D +HG RS SCET L
Sbjct: 209 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 252
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,053,242
Number of Sequences: 59808
Number of extensions: 551059
Number of successful extensions: 2263
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 1853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2231
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1705624125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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