Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10c10
(713 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56656| Best HMM Match : VWA (HMM E-Value=3.8e-26) 36 0.025
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 34 0.13
SB_38931| Best HMM Match : TP2 (HMM E-Value=6.7) 31 1.2
SB_31125| Best HMM Match : zf-MYND (HMM E-Value=0.0003) 29 2.8
SB_57101| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_48164| Best HMM Match : DUF1168 (HMM E-Value=0.19) 29 2.8
SB_15235| Best HMM Match : DUF1421 (HMM E-Value=1.5) 29 2.8
SB_56937| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_50778| Best HMM Match : PA14 (HMM E-Value=0.00025) 29 3.7
SB_28792| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_54638| Best HMM Match : Cache (HMM E-Value=0.0031) 29 4.9
SB_6268| Best HMM Match : Extensin_1 (HMM E-Value=0.098) 29 4.9
SB_766| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_49799| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_48352| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_29938| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_29231| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_23569| Best HMM Match : PAN (HMM E-Value=0.0015) 28 6.5
SB_16461| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_28102| Best HMM Match : YTH (HMM E-Value=0) 28 8.6
SB_56761| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_33530| Best HMM Match : DUF1168 (HMM E-Value=0.19) 28 8.6
SB_1457| Best HMM Match : VHS (HMM E-Value=2e-31) 28 8.6
>SB_56656| Best HMM Match : VWA (HMM E-Value=3.8e-26)
Length = 2157
Score = 36.3 bits (80), Expect = 0.025
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1
Query: 286 PYPVKIKERVPYPVHVAKPYPVPVPQIIKVPHIVT 390
P PV + RVP P+H P P+P P I PH+ T
Sbjct: 1093 PVPVPVPVRVPVPMHQQSPLPMPRP-IPHAPHLAT 1126
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +1
Query: 286 PYPVKIKERVPYPVHVAKPYPVPVPQIIKVPHIVTPGNG 402
P+PV++ RVP+ V V P PV VP I P T G
Sbjct: 214 PFPVRVPVRVPFRVPVRVPVPVRVPVPIHSPVYPTESAG 252
>SB_38931| Best HMM Match : TP2 (HMM E-Value=6.7)
Length = 251
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +1
Query: 403 HNSHEASE--DGVQNNSYNVQENHEPSDGGQSYRPTSNIHSFEGSPSYSQ-DAAQFSEEY 573
H+S +E + SY E+ SDGG+SY T+ H + SP S D + S EY
Sbjct: 114 HSSEGKAEYRSAMNTLSYQRTESIAASDGGKSYSETAPYHYEQLSPPSSHPDDYKDSREY 173
Query: 574 A 576
A
Sbjct: 174 A 174
>SB_31125| Best HMM Match : zf-MYND (HMM E-Value=0.0003)
Length = 109
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +1
Query: 391 PGNGHNSHEASEDGVQNNSYNVQENHEPSDG 483
PGN S E DG++N + N E SDG
Sbjct: 4 PGNKPESAEEQSDGMRNPGNQPESNEEQSDG 34
>SB_57101| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 855
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/88 (23%), Positives = 34/88 (38%), Gaps = 1/88 (1%)
Frame = +1
Query: 286 PYPVKIKERVPYPVHVAKPYPVPVPQIIKVPHIVTPGN-GHNSHEASEDGVQNNSYNVQE 462
PY + +HVA PV + + P I TP N H ++ + N N Q+
Sbjct: 213 PYVASVTLEAIRLIHVAPGIPVFPTRATRTPLIATPSNDNHIYTNENQSALTINEENFQQ 272
Query: 463 NHEPSDGGQSYRPTSNIHSFEGSPSYSQ 546
PS+ +IH + + + Q
Sbjct: 273 YTLPSNDATFDANMDDIHFYTPTNEHFQ 300
>SB_48164| Best HMM Match : DUF1168 (HMM E-Value=0.19)
Length = 1883
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +1
Query: 385 VTPGNGHNSHEASEDGVQNNSYNVQENHEPSDGGQSYRPTSNIHSFEGSPSYSQDAAQFS 564
V P + S +S +N+Y Q + G + PTSN + + S S A + S
Sbjct: 82 VEPQSVMASKPSSASASPSNTYRTQNTDQVKSGSSIHAPTSNKDRIK-AVSSSAMAPKTS 140
Query: 565 EEYAGTP-SGYNAPT 606
E + P S APT
Sbjct: 141 ERFTTKPGSSIGAPT 155
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +1
Query: 385 VTPGNGHNSHEASEDGVQNNSYNVQENHEPSDGGQSYRPTSNIHSFEGSPSYSQDAAQFS 564
V P + S S +N+Y Q + G + PTSN + + S S A + S
Sbjct: 1476 VEPQSVMASKPCSASASPSNTYRTQNTDQVKSGSSIHAPTSNEDRIK-AVSSSAMAPKTS 1534
Query: 565 EEYAGTP-SGYNAPT 606
E + P S +APT
Sbjct: 1535 ERFTTKPGSSIDAPT 1549
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 439 NNSYNVQENHEPSDGGQSYRPTSNIHSFEGSPSYSQDAAQFSEEYAGTP-SGYNAPT 606
+N+Y Q + G + PTSN + + S S A + SE + P S +APT
Sbjct: 674 SNTYRTQNTDQVKSGSSIHAPTSNEDRIK-AVSSSAMAPKTSERFTTKPGSSIDAPT 729
>SB_15235| Best HMM Match : DUF1421 (HMM E-Value=1.5)
Length = 754
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +1
Query: 385 VTPGNGHNSHEASEDGVQNNSYNVQENHEPSDGGQSYRPTSNIHSFEGSPSYSQDAAQFS 564
V P + S S +N+Y Q + G + PTSN + + S S A + S
Sbjct: 347 VEPQSVMASKPCSASASPSNTYRTQNTDQVKSGSSIHAPTSNEDRIK-AVSSSAMAPKTS 405
Query: 565 EEYAGTP-SGYNAPT 606
E + P S +APT
Sbjct: 406 ERFTTKPGSSIDAPT 420
>SB_56937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 761
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +1
Query: 286 PYPVKIKERVPYPVHVAKPYPVPVPQIIKVPHIVT 390
PY + + P H+ PY + P IK P+ +T
Sbjct: 544 PYDITYPYDITCPYHITCPYDITCPYDIKCPYDIT 578
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 319 YPVHVAKPYPVPVPQIIKVPHIVT 390
YP H+ PY + P IK P+ +T
Sbjct: 459 YPYHITCPYDITCPYDIKCPYDIT 482
>SB_50778| Best HMM Match : PA14 (HMM E-Value=0.00025)
Length = 1266
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = -2
Query: 460 LEHYRNYFVHHLPMLHDCYVHSPVLQYVEL**FAVQERGMV*RRALDKAPFPLFSLDK 287
L + + H L L D Y+HS Q+V L + + + R L K P + L K
Sbjct: 1058 LRNQGRWMAHFLDNLQDIYIHSSRDQHVSLIVYDYESEDLDIERELSKRSLPPYKLIK 1115
>SB_28792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 394 GNGHNSHEASEDGVQNNSYNVQENHEPSD 480
G NSH +DG+ +NS+ +++ PSD
Sbjct: 60 GMSSNSHATRDDGMSSNSHATRDDGMPSD 88
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +1
Query: 394 GNGHNSHEASEDGVQNNSYNVQENHEPSDGGQSYRP--TSNIHSFEGSPSYSQDAA 555
G NSH +DG+ +NS+ +++ SD + +SN+H+ G S A
Sbjct: 532 GMSSNSHATRDDGMPSNSHATRDDGMSSDSHATRGDGMSSNLHATRGDGMSSNSHA 587
>SB_54638| Best HMM Match : Cache (HMM E-Value=0.0031)
Length = 598
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -2
Query: 499 AYTTAHHQMVHDFLEHYRNYFVHHLPMLHDCYVHSPVL 386
A T H +VHD L H VH P++H+ VH P++
Sbjct: 478 AVTVLHDPLVHDPLVH--EPLVHE-PLVHEPLVHEPLV 512
>SB_6268| Best HMM Match : Extensin_1 (HMM E-Value=0.098)
Length = 162
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -2
Query: 499 AYTTAHHQMVHDFLEHYRNYFVHHLPMLHDCYVHSPVL 386
A T H +VHD L H VH P++H+ VH P++
Sbjct: 54 AVTVLHDPLVHDPLVH--EPLVHE-PLVHEPLVHEPLV 88
>SB_766| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1704
Score = 28.7 bits (61), Expect = 4.9
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +1
Query: 379 HIVTPGNGHNSHEASEDGVQNNSYNVQENH 468
H++T GN H + G++NNS+ + ++
Sbjct: 1620 HVLTRGNSHEITRDNSHGIRNNSHGITRDN 1649
>SB_49799| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 412 HEASEDG--VQNNSYNVQENHEPSDGGQSYRPTSNIHSFEGSPSYSQ 546
HE + G ++ ++ N+ + +PS G+ T+NI + G+ SYS+
Sbjct: 105 HEIGDQGQVIERSAINIIIHEDPSCAGKFVNVTTNITNSTGNWSYSK 151
>SB_48352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 47
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 532 PSYSQDAAQFSEEYAGTPSGYNAP 603
P S A+ +S AGTPSGY P
Sbjct: 16 PDPSSSASYWSRSPAGTPSGYTGP 39
>SB_29938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1008
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 304 KERVPYPVHVAKPYPVPVPQIIKVPHIVTP 393
+E+ P + + P+P PVP I +P + P
Sbjct: 780 QEKSPSGLQICNPFPSPVPPINTIPPVQPP 809
>SB_29231| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2271
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = +1
Query: 394 GNGHNSHEASEDGVQNNSYN---VQENHEPSDGGQSYRPTSNIHSFEG 528
GN H SH ED + N + Q+ + S +YR N+H +G
Sbjct: 466 GNVHRSHGKYEDAMNNYQHAHSLFQKTGDESGQADAYRGMGNVHWSQG 513
>SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2834
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +1
Query: 391 PGNGHNSHEASEDGVQNNSYNVQENHEPSDGGQSYRPTSNIHSFEGSPSYSQDAAQFSEE 570
PGN ++S ED + S + QEN E + + R T+ E S + +EE
Sbjct: 1466 PGNANSSASLDEDQLPAGSVSDQENREGTTEQDASRETTPRQRGESEVSLVSKTSSLTEE 1525
>SB_23569| Best HMM Match : PAN (HMM E-Value=0.0015)
Length = 504
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = +1
Query: 397 NGHNSHEASEDGVQNNSYNVQENHEPSDGGQSYRPTSNI 513
N +N++ +S + NN+YN N+ ++ +Y+ N+
Sbjct: 453 NTYNNNNSSNNNNNNNTYNNNNNNTYNNNNNNYKQQRNL 491
>SB_16461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 173
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = -3
Query: 345 VWFSDVHWIRHPFLYFHWIRHWNFNSNCLCNFDHFHRRFWYFNM 214
+W V + H +H I W F+ + LC+ ++ + W F++
Sbjct: 103 IWLFHVSLLCHVIYMYHVI--WLFHVSLLCHVNYMYHVIWLFHV 144
>SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3464
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +1
Query: 403 HNSHEASEDGVQNNSYNVQENHEPSDGGQSYRPTSNIHSFEGSPSYSQ 546
H +H E Q+ + Q + ++ +S + ++ SFEG PSY +
Sbjct: 732 HQAHPRVERAYQSLVFLFQYYSDGTEVSESDKENQDVASFEGLPSYER 779
>SB_28102| Best HMM Match : YTH (HMM E-Value=0)
Length = 325
Score = 27.9 bits (59), Expect = 8.6
Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 3/56 (5%)
Frame = +1
Query: 334 AKPYPVPVPQIIKVPHIVTPGNGHNSHEASEDGVQNNSYN---VQENHEPSDGGQS 492
AKP P P PQ K+P V G N S V N V P GG +
Sbjct: 64 AKPKPKPPPQKPKLPGQVPTNGGPNKDSTSWGNVAKAGANKPAVGRGQRPRTGGNA 119
>SB_56761| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 633
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 439 NNSYNVQENHEPSDGGQSYRPT-SNIHSFEGSPSYSQDAAQFSEEY 573
NN YN + N+E ++ Y +N ++ E + Y+ + +++ EY
Sbjct: 250 NNEYNTEYNNEYNEYNNDYNTEYNNEYNTEYNTEYNTEYTEYNTEY 295
>SB_33530| Best HMM Match : DUF1168 (HMM E-Value=0.19)
Length = 1026
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 439 NNSYNVQENHEPSDGGQSYRPTSNIHSFEGSPSYSQDAAQFSEEYAGTP-SGYNAPT 606
+N+Y Q + G + PTSN + + S S A + SE + P S +APT
Sbjct: 671 SNTYRTQNTDQVKSGSSIHAPTSNEDRIK-AVSSSAMAPKTSERFTTKPGSSIDAPT 726
>SB_1457| Best HMM Match : VHS (HMM E-Value=2e-31)
Length = 892
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +1
Query: 358 PQIIKVPHIVTPG-NGHNSHEASEDG--VQNNSYNVQENHEPSDGGQSYRPTSNIHSFEG 528
PQ + PH TP H ++ ++ +N+YN +P+ GGQ +P +G
Sbjct: 745 PQQYQHPHANTPSPTPHQQYQHPQNAGLPADNTYNPSPQGDPNQGGQ--QPGYGAPPTQG 802
Query: 529 SPSYSQ 546
P +Q
Sbjct: 803 GPPQAQ 808
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.312 0.131 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,378,492
Number of Sequences: 59808
Number of extensions: 455096
Number of successful extensions: 1163
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1131
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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