Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10b19
(657 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_2560| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.83
SB_44730| Best HMM Match : zf-C2H2 (HMM E-Value=0) 31 1.1
SB_3481| Best HMM Match : Viral_helicase1 (HMM E-Value=1.1) 30 1.4
SB_43693| Best HMM Match : ACBP (HMM E-Value=2.7) 30 1.4
SB_33454| Best HMM Match : PAN (HMM E-Value=0.0013) 29 2.5
SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026) 29 3.3
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_56761| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_32577| Best HMM Match : PH (HMM E-Value=7e-17) 29 4.4
SB_22570| Best HMM Match : Filament (HMM E-Value=0.1) 29 4.4
SB_54835| Best HMM Match : Laminin_EGF (HMM E-Value=0.13) 28 7.7
SB_41836| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.5e-07) 28 7.7
SB_58044| Best HMM Match : Vitellogenin_N (HMM E-Value=0.022) 28 7.7
SB_44903| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_31903| Best HMM Match : Amino_oxidase (HMM E-Value=3.36312e-44) 28 7.7
>SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1929
Score = 33.5 bits (73), Expect = 0.15
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Frame = +2
Query: 209 LVLKTELELGNS--DPRSPTPEITRTPLQGKNGAKHNITKNIDLRKTFESTNGDEKLIHN 382
L+LK + G+S PRSP+P R PL+ ++ + N + R T ES + E +
Sbjct: 1633 LMLKKDRSGGSSPVSPRSPSPCEPRLPLESRSPFESN--SSFQSRSTTESRSSAESRLPA 1690
Query: 383 NPILSAVIKNHLQSYDP---RSPTQDFERTPIII 475
L A + +S+ P R PT+ PI +
Sbjct: 1691 ESRLPAESRLPYESHSPYESRYPTEPSSAYPITV 1724
>SB_2560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 230
Score = 31.1 bits (67), Expect = 0.83
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 368 KLIHNNPILSAVIKNHLQSYDPRSPTQDFERTPIIISSKINDLTNDTENLRL 523
+++ P ++ + + DPRSPT F+RTPI + D N +N+ L
Sbjct: 11 EMVPETPEMNREVSDVKDFDDPRSPTVYFDRTPI----HLQDYENSPQNIEL 58
Score = 27.9 bits (59), Expect = 7.7
Identities = 29/107 (27%), Positives = 45/107 (42%)
Frame = +2
Query: 245 DPRSPTPEITRTPLQGKNGAKHNITKNIDLRKTFESTNGDEKLIHNNPILSAVIKNHLQS 424
DPRSPT RTP+ ++ N +NI+L T + + P+ K+ L
Sbjct: 31 DPRSPTVYFDRTPIHLQD--YENSPQNIELH-TQQDPRSPTVCVARTPLPQTKQKDELDG 87
Query: 425 YDPRSPTQDFERTPIIISSKINDLTNDTENLRLISDSCTSPITSKDK 565
D T+ S + T D E++ L S +P+T KD+
Sbjct: 88 KDEVFITRTRSN-----SEPTSPTTADKEDVSL---SPEAPLTRKDR 126
>SB_44730| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1346
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = +2
Query: 335 RKTFESTNGDEKLIHNNPILSAVIKNHLQSYDPRSPTQDFERTPIII---SSKINDLTND 505
RK FE+ GD++ ++ + + +K L++ P + + II S + +
Sbjct: 296 RKQFENVRGDKEFESDDEVALSTLKT-LKNPKAVKPIKGQSKKGTIINDNSRRSKRASIS 354
Query: 506 TENLRLISDSCTSPITSKDKDNSCE 580
E+ L + TSP+ D ++SCE
Sbjct: 355 RESAELNRNKDTSPVEKNDNEDSCE 379
>SB_3481| Best HMM Match : Viral_helicase1 (HMM E-Value=1.1)
Length = 1347
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +2
Query: 206 SLVLKTELELGNSDPRSPTPEITRTPLQGKNGAKHNITKNIDLRKTFESTN 358
SL +K ++ S+ R+ E+ + PL KN TKN+ RKTF+S++
Sbjct: 131 SLAIKGFTQIKPSNERTGGNEVKKKPLSPKNDK----TKNMTQRKTFQSSS 177
>SB_43693| Best HMM Match : ACBP (HMM E-Value=2.7)
Length = 354
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Frame = +2
Query: 284 LQGKNGAKHNITKNIDLRKTFE-STNGDEKLIHNNPIL---SAVIKNHLQSYDPRSPTQD 451
L + +H K+ D++++ + D+ H +P + S + N +SP +D
Sbjct: 185 LSQRKEQEHKEQKSPDVKRSPDVRRTPDDARAHKSPDVPRRSPDVPNRYNGVHEKSPWRD 244
Query: 452 FERTPIIISSKINDLTNDTENLRLISDSCTSPITSKDKDNS 574
E I+I S+ D++ + NL +S ITS + S
Sbjct: 245 GEERKIVIKSEREDVSYEKLNLEEKFNSANDRITSLMRSGS 285
>SB_33454| Best HMM Match : PAN (HMM E-Value=0.0013)
Length = 459
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +2
Query: 143 SSLLDYINN--KMGSNSSKPTDTSLVLKTELELGNSDPRSPTPEITRTPLQGKNGAKHNI 316
+S D +N +M ++++ TD + VL + ++ + T + KNG N
Sbjct: 357 NSTTDVTDNTTEMTNSTTVTTDGTTVLTRNITTKETNETTEMTTNTTATTEEKNGTTENT 416
Query: 317 TKNIDLRKTFESTNGDEKLI 376
T ++ +S NG+ K++
Sbjct: 417 TDSVPESMESQSINGNRKIV 436
>SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026)
Length = 3342
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/86 (23%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +2
Query: 203 TSLVLKTELELGNSDPRSPTPEITRTPLQGKNGAKHNITKNIDLRKTFESTNGDEKLIHN 382
++L +KT+ NS + +P + T + + HN + + +TF+ ++GD +
Sbjct: 2108 STLPIKTDNRGANSQGHA-SPTLAETTVSEVDVVLHNKAQALSTEETFDFSSGDNTNLDA 2166
Query: 383 NPILSAVIK--NHLQSYDPRSPTQDF 454
+ A + N L+ DP + Q+F
Sbjct: 2167 SGATEAQFQKTNPLKRLDPVTVLQEF 2192
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 29.1 bits (62), Expect = 3.3
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Frame = +2
Query: 179 SNSSKPTDTSLVLKTELELGNSDPR-SPTPEITRTP-LQGKNGAKHNITKNIDLRKTFES 352
S SS+ T+ L+ + +SD TP +T TP LQG + A + T+ +T +S
Sbjct: 1525 SASSETTNEKLLPGKQSPGASSDTELKGTPSVTNTPQLQGTSSASES-TQTQQSSQTTQS 1583
Query: 353 TNGDEKLIHNNPILSAVIKNHLQSYDPRSPTQDFERTPI 469
T + + ++V+++ QS PT + E P+
Sbjct: 1584 TTPTATALAVDSTTTSVMESRTQSV-VVIPTVNIEMEPV 1621
>SB_56761| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 633
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/77 (20%), Positives = 34/77 (44%)
Frame = +2
Query: 155 DYINNKMGSNSSKPTDTSLVLKTELELGNSDPRSPTPEITRTPLQGKNGAKHNITKNIDL 334
+++ N N+SK DT++ E+ + + + P++ T +G ++N N +
Sbjct: 199 EHMPNTPQENNSK-VDTTIGQSKEIVVEGENTQQCAPQMASTSSKGVYNTEYNNEYNTEY 257
Query: 335 RKTFESTNGDEKLIHNN 385
+ N D +NN
Sbjct: 258 NNEYNEYNNDYNTEYNN 274
>SB_32577| Best HMM Match : PH (HMM E-Value=7e-17)
Length = 1248
Score = 28.7 bits (61), Expect = 4.4
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 3/126 (2%)
Frame = +2
Query: 143 SSLLDYINNKM--GSNS-SKPTDTSLVLKTELELGNSDPRSPTPEITRTPLQGKNGAKHN 313
S+ L + +N + G N+ S P +L L+ E D P P+ + L + G++ +
Sbjct: 826 STSLPFSDNVLPEGENTYSVPLSPALSLEKEHISALDDEELPAPKRSSVVLTSRPGSRKD 885
Query: 314 ITKNIDLRKTFESTNGDEKLIHNNPILSAVIKNHLQSYDPRSPTQDFERTPIIISSKIND 493
R S + DEKL NP+ +N L+ P +P R + ++ + +
Sbjct: 886 SAPPKPPRSRGTSVSIDEKLEAENPL----SENKLREEKPATPEAPPRR--LTVNKEDEE 939
Query: 494 LTNDTE 511
T TE
Sbjct: 940 KTKSTE 945
>SB_22570| Best HMM Match : Filament (HMM E-Value=0.1)
Length = 601
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 473 ISSKINDLTNDTENLRLISDSCTSPITSKDKDNS 574
+ ++NDLT + EN + S ITS +K+N+
Sbjct: 96 LQERLNDLTQERENYETREKTLQSKITSIEKENN 129
>SB_54835| Best HMM Match : Laminin_EGF (HMM E-Value=0.13)
Length = 625
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 69 KMLFYY*NN*LCFIGCSIITQVISEALYWTILIIKWEVIQVNQPTPLW 212
KM+F+Y N CF G +I +++ L T L+I ++ V W
Sbjct: 352 KMVFFYDGNVQCFQGRHLIVSIVA-LLVLTFLVIPLPIVIVLLTRGYW 398
>SB_41836| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.5e-07)
Length = 1128
Score = 27.9 bits (59), Expect = 7.7
Identities = 32/126 (25%), Positives = 52/126 (41%), Gaps = 5/126 (3%)
Frame = +2
Query: 218 KTELELGNSDPRSPTPEITRTPLQGKNGAKHNITK-NIDLRKTFESTNGDEKLIHNNPIL 394
+T EL S S T E++ + +N ++ K N D+ E N D+ N I
Sbjct: 43 ETMAEL-QSQQDSATSEMSGEQSRDENEKSNDDEKLNGDINGQEEEANNDDTEHERNLIQ 101
Query: 395 SAVIKNHLQSYDPRSPTQDFE----RTPIIISSKINDLTNDTENLRLISDSCTSPITSKD 562
+ Q+ DP S +DF +P + +S D + +N S IT+++
Sbjct: 102 EPANSSEPQNEDPSSEDKDFAIANGVSPSLSASPSEDESIVNDNKDKSSTVKEDKITTEN 161
Query: 563 KDNSCE 580
DN E
Sbjct: 162 NDNLLE 167
>SB_58044| Best HMM Match : Vitellogenin_N (HMM E-Value=0.022)
Length = 1671
Score = 27.9 bits (59), Expect = 7.7
Identities = 19/71 (26%), Positives = 30/71 (42%)
Frame = +2
Query: 338 KTFESTNGDEKLIHNNPILSAVIKNHLQSYDPRSPTQDFERTPIIISSKINDLTNDTENL 517
K + D L H IL K L SYD T+D +++ + +N EN+
Sbjct: 1582 KAMRTVYDDAILQHTKSILEVRRKLQL-SYDLWKKTKDINTVIQALNTVVKGASNYAENI 1640
Query: 518 RLISDSCTSPI 550
+ ++ SPI
Sbjct: 1641 QDVTSKINSPI 1651
>SB_44903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1281
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/52 (26%), Positives = 21/52 (40%)
Frame = +2
Query: 419 QSYDPRSPTQDFERTPIIISSKINDLTNDTENLRLISDSCTSPITSKDKDNS 574
Q + S TQD + P+ S +T D+ + DS P+T S
Sbjct: 1113 QDLNQESVTQDSTQEPVTQDSNQESVTQDSTQEPVTQDSTQEPVTQDSNQES 1164
>SB_31903| Best HMM Match : Amino_oxidase (HMM E-Value=3.36312e-44)
Length = 1021
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +2
Query: 221 TELELGNS--DPRSPTPEITRTPLQGKNGAKHNITKNIDLRKTFESTNGDEK 370
T+LE GNS +P+SP E + T N +N+ + + +STN K
Sbjct: 619 TQLEEGNSQLEPKSPYLEASNTQFDVSNAQINNVDNLHAVATSIKSTNKTTK 670
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,889,860
Number of Sequences: 59808
Number of extensions: 346173
Number of successful extensions: 946
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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