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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0118
         (547 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0)                        34   0.066
SB_7412| Best HMM Match : IRK (HMM E-Value=2.2e-20)                    31   0.81 
SB_50891| Best HMM Match : CsbD (HMM E-Value=3.4)                      30   1.1  
SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)        30   1.4  
SB_10487| Best HMM Match : FGF (HMM E-Value=1.4e-06)                   29   3.3  
SB_34783| Best HMM Match : Gam (HMM E-Value=0.24)                      28   4.3  
SB_21873| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.3  
SB_12797| Best HMM Match : HECT (HMM E-Value=0)                        28   4.3  
SB_21510| Best HMM Match : zf-C2H2 (HMM E-Value=6.3e-07)               28   5.7  
SB_41682| Best HMM Match : PX (HMM E-Value=3.9)                        27   7.6  

>SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0)
          Length = 2681

 Score = 34.3 bits (75), Expect = 0.066
 Identities = 19/57 (33%), Positives = 25/57 (43%)
 Frame = +1

Query: 187 PEGKELKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNELEIWKELTAHFDPDGKW 357
           PE   L  H  E    GC  C        ++  +   ++ LE W  LTA+FD DG W
Sbjct: 165 PENARLNSHCTETSRGGC--CVFPFIYKDKSYTECTTEDSLEPWCALTANFDVDGMW 219


>SB_7412| Best HMM Match : IRK (HMM E-Value=2.2e-20)
          Length = 610

 Score = 30.7 bits (66), Expect = 0.81
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +1

Query: 118 EILENKRLLESYMDCVLGKGKCTPEGKELKDHLQEALETGCEKCTEAQEK 267
           +I    +L+ES+M  V+ +  CT EGKE+    Q+ L    +   E +EK
Sbjct: 390 DIRTKSQLIESHMRAVVVRRHCTKEGKEI-GFFQQGLPLRHDLICEEEEK 438


>SB_50891| Best HMM Match : CsbD (HMM E-Value=3.4)
          Length = 311

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 19/63 (30%), Positives = 32/63 (50%)
 Frame = +1

Query: 79  DKYTDKYDKINLQEILENKRLLESYMDCVLGKGKCTPEGKELKDHLQEALETGCEKCTEA 258
           ++   K +++N   I + KR  E       GKG  T +GK   +  +EA+E G E C + 
Sbjct: 113 ERVNKKKERLNKGSIEQGKRATEQ------GKG-ATEQGKGATEQGKEAIEQGKEACEQE 165

Query: 259 QEK 267
           +E+
Sbjct: 166 RER 168


>SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)
          Length = 3107

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 3/99 (3%)
 Frame = +1

Query: 82   KYTDKYDKINLQEIL---ENKRLLESYMDCVLGKGKCTPEGKELKDHLQEALETGCEKCT 252
            K  D + KI+ Q I    ENK L +   D    K K   E KE+K  L+EA         
Sbjct: 1377 KIEDDHKKIHQQNIERDHENKMLSKRVADLTALKEKFEHEKKEMKQSLREA--------- 1427

Query: 253  EAQEKGAETSIDYLIKNELEIWKELTAHFDPDGKWRKKY 369
            + +E   E   +Y +K ++ + ++L    +     R+K+
Sbjct: 1428 QGRESDLEVRYEYEVKEKVALQQQLDDTTNRSNADREKF 1466


>SB_10487| Best HMM Match : FGF (HMM E-Value=1.4e-06)
          Length = 617

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 17/58 (29%), Positives = 25/58 (43%)
 Frame = +1

Query: 178 KCTPEGKELKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNELEIWKELTAHFDPDG 351
           K TP G+ LKD  Q   ++   KCT  +   + + +  L K  L I+     H    G
Sbjct: 329 KSTPSGRYLKDFRQSTDQSRRPKCTRVKTTTSGSEM-RLTKRHLHIYDACPTHIGGSG 385


>SB_34783| Best HMM Match : Gam (HMM E-Value=0.24)
          Length = 347

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
 Frame = +1

Query: 109 NLQEILEN-KRLLESYMDC---VLGKGKCTPEGKELKDHLQEALETGCEKCTEAQ 261
           N Q+ LE+ +++LE ++     V+   +   E + L+D  +EA  TGC KC+ A+
Sbjct: 122 NSQKRLESHEKVLEEHLKEMLEVIAHMQMREEKRYLRDMSREAATTGCVKCSSAR 176


>SB_21873| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 550

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 14/47 (29%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
 Frame = +1

Query: 112 LQEILENKRLLESYMDCVLGKG-KCTPEGKEL--KDHLQEALETGCE 243
           +QEI+ + +L+E   DC+L +  +  PEG +L  + ++ +A+   C+
Sbjct: 229 MQEIISSSQLMEYLGDCILAQAPERLPEGAQLNYEQNMHDAIGIMCK 275


>SB_12797| Best HMM Match : HECT (HMM E-Value=0)
          Length = 749

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 160 CVLGKGKCTPEGKELKDHLQEALETGCEKCTE 255
           CVL + K  PE   L +H +E+L +  + C +
Sbjct: 118 CVLNQPKSKPENSHLNNHAEESLLSTLKTCRD 149


>SB_21510| Best HMM Match : zf-C2H2 (HMM E-Value=6.3e-07)
          Length = 229

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
 Frame = +1

Query: 175 GKCTPEGKELKDHLQEALET--GCEKCTEAQEKGAETSIDYLI 297
           GKC  E   LKDH+    E    C +C +   K     I  LI
Sbjct: 43  GKCFTEAARLKDHILHTGEKPYQCSQCGKCSAKSGNHKIHVLI 85


>SB_41682| Best HMM Match : PX (HMM E-Value=3.9)
          Length = 96

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -2

Query: 189 GSTLALAEHAIHIRLQEPLVLQNFLQVNFV 100
           G  LA  E  +H+ LQEP++ +N++   F+
Sbjct: 45  GHPLAQNEKCLHMFLQEPMIDKNYVPGKFI 74


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,551,078
Number of Sequences: 59808
Number of extensions: 277478
Number of successful extensions: 954
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 954
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1252112599
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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