Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0113
         (697 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.)             153   1e-37
SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0)                151   5e-37
SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0)               139   2e-33
SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.)             112   3e-25
SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.)               89   4e-18
SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1)              62   3e-10
SB_51365| Best HMM Match : ig (HMM E-Value=0.00037)                    34   0.096
SB_55921| Best HMM Match : Aldo_ket_red (HMM E-Value=0.16)             33   0.29 
SB_53303| Best HMM Match : Pro-NT_NN (HMM E-Value=7.1)                 32   0.51 
SB_19371| Best HMM Match : C_tripleX (HMM E-Value=0.041)               30   1.6  
SB_23595| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.1  
SB_1127| Best HMM Match : Acetyltransf_1 (HMM E-Value=9.4e-19)         29   3.6  
SB_53172| Best HMM Match : ABC_tran (HMM E-Value=5.4e-40)              28   6.3  
SB_17370| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.3  
SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.3  
SB_8703| Best HMM Match : rve (HMM E-Value=1.5e-22)                    28   8.3  

>SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 340

 Score =  153 bits (371), Expect = 1e-37
 Identities = 82/212 (38%), Positives = 128/212 (60%), Gaps = 11/212 (5%)
 Frame = +2

Query: 92  IQLNDGNTIPIVALGTGRGTAKESDSIDEVRQAVYWAIEAGYRHIDTAAVYQDEEQVGQG 271
           ++LN+G  +P++ LGT +          +V  AV +AI+ GYRHID A  Y++E++VG  
Sbjct: 4   VKLNNGLEMPVLGLGTWKSKP------GQVENAVKFAIKEGYRHIDCAYAYRNEKEVGDA 57

Query: 272 IAEAIANGLVTREELFVTTKLWNDKHARDQVVPALQESLKKLGLDYIDLYLIHFPIATK- 448
           + E + + +V R++LF+T+KLWN KH    V     +SLK LGLDY+DLYLIH+P++ + 
Sbjct: 58  LRELLGS-VVERKDLFITSKLWNTKHNPKDVRSNCVDSLKDLGLDYLDLYLIHWPLSFRD 116

Query: 449 -----PDDSPDNI-----DYLETWQGMQDARQLGLARSIGVSNFNATQITRLVSNSYIRP 598
                P D   N+     D  +TW+ M+     GL ++IG+SNFN+ Q+  + + + I+P
Sbjct: 117 GDEFFPKDEQGNVLYAYHDPCDTWKAMEKLVDEGLVKAIGLSNFNSKQVDDICAIARIKP 176

Query: 599 VINQIEVNPTNTQEPLVAHCQSLGIAVMAYSP 694
           V NQ+E +P   Q  L+ H +   I  +AYSP
Sbjct: 177 VANQVECHPLLNQAKLIDHHKKHNIQTIAYSP 208


>SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
          Length = 407

 Score =  151 bits (366), Expect = 5e-37
 Identities = 80/179 (44%), Positives = 107/179 (59%), Gaps = 11/179 (6%)
 Frame = +2

Query: 167 SIDEVRQAVYWAIEAGYRHIDTAAVYQDEEQVGQGIAEAIANGLVTREELFVTTKLWNDK 346
           S +EV  AV  AIE GYRHID A +Y +E ++G+ ++E +  G V REELFVT+KLW D 
Sbjct: 63  SKEEVGNAVRLAIELGYRHIDCAEIYGNEGEIGEALSEVLTEGKVKREELFVTSKLWCDS 122

Query: 347 HARDQVVPALQESLKKLGLDYIDLYLIHFPIATK-----PDDSPDNI------DYLETWQ 493
           H  D V+PA Q +LK L LDY+DLYLIH P+A K     P    + I          TWQ
Sbjct: 123 HHPDDVLPACQATLKNLQLDYLDLYLIHIPVAFKKGVRLPHSIAEGIIGYTPEGVQNTWQ 182

Query: 494 GMQDARQLGLARSIGVSNFNATQITRLVSNSYIRPVINQIEVNPTNTQEPLVAHCQSLG 670
            M+     GL ++IGVSNF+  ++ +L+  + I P  NQ+E++P   QE L   C S G
Sbjct: 183 AMEGLVAKGLCKAIGVSNFSVKRLNKLLETASIVPACNQVELHPYLPQEKLKEFCDSKG 241


>SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
          Length = 333

 Score =  139 bits (337), Expect = 2e-33
 Identities = 80/199 (40%), Positives = 116/199 (58%)
 Frame = +2

Query: 98  LNDGNTIPIVALGTGRGTAKESDSIDEVRQAVYWAIEAGYRHIDTAAVYQDEEQVGQGIA 277
           +NDG  IP++ LG     A +  S    +QAV WA+E+GYR IDTA+ Y +E+ VG    
Sbjct: 70  MNDGRKIPLLGLG-----AHDIHS----KQAVLWALESGYRLIDTASRYHNEQSVG---- 116

Query: 278 EAIANGLVTREELFVTTKLWNDKHARDQVVPALQESLKKLGLDYIDLYLIHFPIATKPDD 457
           EA+    + R E++V TK++  +H   + + A  +SL +LGL Y+DLYLIHFP+      
Sbjct: 117 EAVRCSNIPRCEIYVVTKVYFTEHGYKETMDAFYKSLTRLGLGYVDLYLIHFPV------ 170

Query: 458 SPDNIDYLETWQGMQDARQLGLARSIGVSNFNATQITRLVSNSYIRPVINQIEVNPTNTQ 637
            P  +  + +WQ M D R  GL RSIGVSNFN   +  L   + + P +NQIEV+P    
Sbjct: 171 -PSGV--VGSWQAMIDLRSRGLIRSIGVSNFNIQHLEALRQQTGVVPAVNQIEVHPFLQM 227

Query: 638 EPLVAHCQSLGIAVMAYSP 694
           + L  +C+   I + A+SP
Sbjct: 228 KELTQYCKRHNITIQAFSP 246


>SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 394

 Score =  112 bits (269), Expect = 3e-25
 Identities = 62/166 (37%), Positives = 95/166 (57%)
 Frame = +2

Query: 197 WAIEAGYRHIDTAAVYQDEEQVGQGIAEAIANGLVTREELFVTTKLWNDKHARDQVVPAL 376
           +A++ GYR +DTA +YQ+E++VG  + ++   GL  RE+++VTTKL   +      +   
Sbjct: 52  FALKNGYRMLDTADIYQNEKEVGSAVRKS---GL-KREDIYVTTKLKPSEEGHSNALKYA 107

Query: 377 QESLKKLGLDYIDLYLIHFPIATKPDDSPDNIDYLETWQGMQDARQLGLARSIGVSNFNA 556
           +ES+KKL + Y+DL+LIH P        P NI  +  +  +   ++ GL RS+GVSNF  
Sbjct: 108 KESIKKLDIGYVDLFLIHTP-------RPGNI--IAAYDALLTLKEEGLIRSVGVSNFGV 158

Query: 557 TQITRLVSNSYIRPVINQIEVNPTNTQEPLVAHCQSLGIAVMAYSP 694
             +  L       P INQIE+NP   QE ++ +C   GI V  Y+P
Sbjct: 159 HHLEELRKAGCRTPAINQIEINPFWRQEEIIKYCNKHGITVEGYAP 204


>SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 619

 Score = 88.6 bits (210), Expect = 4e-18
 Identities = 64/205 (31%), Positives = 104/205 (50%), Gaps = 5/205 (2%)
 Frame = +2

Query: 92  IQLNDGNTIPIVALGTGRGTAKESDSIDEVRQAVYWAIEAGYRHIDTAAVYQDEEQVGQG 271
           + L  G T+P++  GT   T  E D++  V+ A    +E GYR IDTA  Y   E     
Sbjct: 329 VLLASGYTMPVMGFGTA--TLGE-DTLSVVKTA----LETGYRLIDTAQGYPLSEPQ--- 378

Query: 272 IAEAIANGLVTREELFVTTKLWNDKHARDQVVPALQESLKKLGLDYIDLYLIHFP----- 436
           +A+AIA+  + R+++F+ TKL       +  + +++ SL+ L  DYIDL+LIH       
Sbjct: 379 VAKAIADSGIPRKDIFIITKLHPRYLGYEPTLKSVEMSLRALSTDYIDLFLIHSKTCDDF 438

Query: 437 IATKPDDSPDNIDYLETWQGMQDARQLGLARSIGVSNFNATQITRLVSNSYIRPVINQIE 616
           + T  +  P    + E+W+ M++  + G  RS+GVSNFN  ++  LV+ + +     Q  
Sbjct: 439 LLTCAEGEPRG-TWKESWKAMEELHRQGKIRSLGVSNFNVDELQELVNFATVPVSAVQNW 497

Query: 617 VNPTNTQEPLVAHCQSLGIAVMAYS 691
            +P +        C   GI  + YS
Sbjct: 498 FDPFHQDRKARRFCNKHGIRYIGYS 522


>SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1)
          Length = 93

 Score = 62.5 bits (145), Expect = 3e-10
 Identities = 38/100 (38%), Positives = 55/100 (55%)
 Frame = +2

Query: 98  LNDGNTIPIVALGTGRGTAKESDSIDEVRQAVYWAIEAGYRHIDTAAVYQDEEQVGQGIA 277
           L+DG  IP   LG      K +      +QAV WA+E GYR IDTAA Y +E++VG    
Sbjct: 3   LSDGYKIPRFGLGLYDLDEKHT------KQAVLWALENGYRMIDTAASYNNEKRVG---- 52

Query: 278 EAIANGLVTREELFVTTKLWNDKHARDQVVPALQESLKKL 397
           EA+    V R E+++ TK+++  H  ++ + A   SL  L
Sbjct: 53  EALRESAVPRSEVYLVTKVYHTDHGYEKTMKAYDRSLSAL 92


>SB_51365| Best HMM Match : ig (HMM E-Value=0.00037)
          Length = 498

 Score = 34.3 bits (75), Expect = 0.096
 Identities = 21/89 (23%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
 Frame = +2

Query: 356 DQVVPALQESLKKLGLDYIDLYLIHFPIATKPDDSPDNIDYLETWQGMQDARQLGLARSI 535
           D+V+  +  SLK++  D +D++ +H P    P +        E+ + +    + G  +  
Sbjct: 337 DRVLEQMNTSLKRMKRDKVDIFYLHAPDHKTPIE--------ESLKAVDQLHKEGKFKEF 388

Query: 536 GVSNFNATQITRLV----SNSYIRPVINQ 610
           G+SN+ A ++  +     +N+YI P + Q
Sbjct: 389 GLSNYAAWEVAEIYYLCKANNYILPTLYQ 417


>SB_55921| Best HMM Match : Aldo_ket_red (HMM E-Value=0.16)
          Length = 195

 Score = 32.7 bits (71), Expect = 0.29
 Identities = 14/41 (34%), Positives = 29/41 (70%)
 Frame = +2

Query: 311 ELFVTTKLWNDKHARDQVVPALQESLKKLGLDYIDLYLIHF 433
           EL   +K+  +  +  +++ + ++SL++LG+D IDLYL+H+
Sbjct: 27  ELGTLSKVRPENASEMKMMLSCEKSLERLGIDRIDLYLLHW 67


>SB_53303| Best HMM Match : Pro-NT_NN (HMM E-Value=7.1)
          Length = 266

 Score = 31.9 bits (69), Expect = 0.51
 Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
 Frame = +2

Query: 407 YIDLYLIHFPIATKPDDSPDNIDYLETWQGMQDARQLG-LARSIGVSNFNATQITRLVSN 583
           +++ + I FP+      +PD  ++L    G  D R +G + R + V +F   + T ++ +
Sbjct: 193 FLEKFKIFFPLDAPNKKTPDRPEHLRVIGGTSD-RMIGRITRKLFV-DFLCFRNTAILRS 250

Query: 584 SYIRPVIN 607
           SY RPV N
Sbjct: 251 SYKRPVFN 258


>SB_19371| Best HMM Match : C_tripleX (HMM E-Value=0.041)
          Length = 942

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = +2

Query: 137 TGRGTAKESDSIDEVRQAVYWAIEAGYRHIDTAA 238
           +G G+ ++  +I ++R   Y A EAGY+H DTA+
Sbjct: 766 SGTGSIRDIPAISDIR---YGASEAGYKHDDTAS 796


>SB_23595| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 281

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 530 TWPDPAAARPACLARFPDSRCYQENRQAL 444
           +WP+    +  C    PDS C Q+ RQ L
Sbjct: 158 SWPEARDEKQVCSNNLPDSTCTQKERQRL 186


>SB_1127| Best HMM Match : Acetyltransf_1 (HMM E-Value=9.4e-19)
          Length = 317

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +2

Query: 197 WAIEAGYRHIDTAAVYQDEEQVGQGIAEAIANGLVTREE 313
           W    G+RH    +VY   +Q GQG+   +   L+ R +
Sbjct: 219 WRAIEGFRHTVEHSVYVRSDQRGQGLGPRLMQALIERAQ 257


>SB_53172| Best HMM Match : ABC_tran (HMM E-Value=5.4e-40)
          Length = 665

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = -3

Query: 173 LLSQTP*LFLVQFPKLLWV*YYHRSVVCKALAPPLLRSTNMLR*LFS 33
           +L  +P   L ++ +L W   YHR ++   ++  L  + N+LR LFS
Sbjct: 474 VLQASPSWILAKWDRLTWANAYHRGIIVAYIS--LTIAANVLRYLFS 518


>SB_17370| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1743

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = +2

Query: 407  YIDLYLIHFPIATKPDDSPDNIDYLETWQGMQDARQLG-LARSIGVSNFNATQITRLVSN 583
            +++ + I FP+      +PD  ++L    G  D R +G + R + V +F   + T ++ +
Sbjct: 1089 FLEKFKIFFPLDAPNKKTPDRPEHLRVIGGTSD-RMIGRITRKLCV-DFLCFRNTSILRS 1146

Query: 584  SYIRPVI 604
            SY RP +
Sbjct: 1147 SYKRPYL 1153


>SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1671

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 9/21 (42%), Positives = 17/21 (80%)
 Frame = +1

Query: 13  RQDGQFAENNHLNMFVERSNG 75
           RQDG +A++++ N+++  SNG
Sbjct: 319 RQDGNYADSSNCNLYITCSNG 339


>SB_8703| Best HMM Match : rve (HMM E-Value=1.5e-22)
          Length = 382

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 269 PDRLAPRPGIRQPCRYVC 216
           PDRL PR  +R P R +C
Sbjct: 346 PDRLRPRKVVRPPARLIC 363


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,953,722
Number of Sequences: 59808
Number of extensions: 471342
Number of successful extensions: 1283
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1272
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1817559367
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)