Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0100
         (762 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_35796| Best HMM Match : ASC (HMM E-Value=7.4e-18)                   31   1.4  
SB_38475| Best HMM Match : ASC (HMM E-Value=3.1e-14)                   30   1.8  
SB_44545| Best HMM Match : ASC (HMM E-Value=4.8e-13)                   30   2.4  
SB_33028| Best HMM Match : Cys_rich_FGFR (HMM E-Value=6.3)             29   4.1  
SB_2835| Best HMM Match : Spectrin (HMM E-Value=0.14)                  29   5.5  
SB_38653| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.5  
SB_24394| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.2  
SB_57975| Best HMM Match : 7tm_1 (HMM E-Value=6.8e-15)                 28   9.5  
SB_37668| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.5  
SB_47606| Best HMM Match : 7tm_1 (HMM E-Value=0.0015)                  28   9.5  

>SB_35796| Best HMM Match : ASC (HMM E-Value=7.4e-18)
          Length = 422

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = +1

Query: 22  ISNFIFIFNVNHSISLCSVD-LHEIYIFSCDCITLHKFNVTR 144
           I++F   FNVN+++++CS   LH+  I  C C  +  F +TR
Sbjct: 282 ITDFNRYFNVNYTMAICSKQCLHDYGIKKCGCQPI--FEITR 321


>SB_38475| Best HMM Match : ASC (HMM E-Value=3.1e-14)
          Length = 421

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +1

Query: 22  ISNFIFIFNVNHSISLCSVD-LHEIYIFSCDCITLHKFNVTRS 147
           I++F   FNVN+++++CS   LH+  I  C C  + +  +  S
Sbjct: 281 ITDFNRYFNVNYTMAICSKQCLHDYGIKKCGCQPIFEITIITS 323


>SB_44545| Best HMM Match : ASC (HMM E-Value=4.8e-13)
          Length = 386

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = +1

Query: 22  ISNFIFIFNVNHSISLCSVD-LHEIYIFSCDCITLHKFNVTRS 147
           I++F   FNVN+++++CS   LH+  I  C C  +  F +T S
Sbjct: 282 ITDFNRYFNVNYTMAICSKQCLHDYGIKKCGCQPI--FEITSS 322


>SB_33028| Best HMM Match : Cys_rich_FGFR (HMM E-Value=6.3)
          Length = 144

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = +1

Query: 22  ISNFIFIFNVNHSISLCSVD-LHEIYIFSCDC 114
           I++F   FNVN+++++CS   LH+  I  C C
Sbjct: 82  ITDFNRYFNVNYTMAICSKQCLHDYGIKKCGC 113


>SB_2835| Best HMM Match : Spectrin (HMM E-Value=0.14)
          Length = 1089

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 80  ICMRYTYFRVIA*HYINLM 136
           +CM Y YF +I  HY++L+
Sbjct: 697 VCMLYAYFNIIIIHYVSLV 715


>SB_38653| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 133

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 19/55 (34%), Positives = 29/55 (52%)
 Frame = +1

Query: 34  IFIFNVNHSISLCSVDLHEIYIFSCDCITLHKFNVTRSK*TMYLKQYT*IIVTIH 198
           I   +VNHS+S  ++   E+ +F+   I L     TRS  T+ L+  T +I T H
Sbjct: 15  ICFLDVNHSLSRVAIGCFELIVFNFLPIVLIALGFTRSLRTL-LRLSTIVIPTEH 68


>SB_24394| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 287

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
 Frame = +3

Query: 207 SNVFIAIVDKQAHGSPDG---EWLMVRDRAKPL 296
           S +F+  V +Q HG+PDG   + ++  D A+P+
Sbjct: 9   SLLFVVHVGRQVHGAPDGDVEDTMIAEDEARPV 41


>SB_57975| Best HMM Match : 7tm_1 (HMM E-Value=6.8e-15)
          Length = 256

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = +2

Query: 17  QKYQILFSSLMLIIPFHCV-PWICMRYTYFRVIA*HYIN 130
           +K Q L+ SL +I+ F  + P++ + ++YF++I   Y N
Sbjct: 151 EKMQELYISLTVIVVFMTIAPFLVIAFSYFQIIYGLYFN 189


>SB_37668| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 591

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
 Frame = +1

Query: 61  ISLCSVDLHEIYIFSCD-CITLHKFNVTRSK*TMYLKQYT*II----VTIHDFEVM 213
           I+  ++D+++  IF     I +HKF +   + T+  +Q+T +I    + IH F ++
Sbjct: 348 INQFTIDIYQFTIFIYQFTIVIHKFTIVILQFTIVFRQFTIVINQFTIVIHQFTIV 403


>SB_47606| Best HMM Match : 7tm_1 (HMM E-Value=0.0015)
          Length = 293

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = -2

Query: 239 LFIYDGNENITSK-SCMVTIIYVYCFKYIVYLDRVTLNLCNVM 114
           LF+Y  N N T+   C+V  I V+CF  +  L+ V ++L   M
Sbjct: 181 LFLYLMNGNHTANWHCVVNNIPVFCFPAMTILNLVVISLDRYM 223


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,302,986
Number of Sequences: 59808
Number of extensions: 481092
Number of successful extensions: 1123
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1122
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2082369341
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)