Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0086
         (762 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)                  28   7.2  
SB_50210| Best HMM Match : I-set (HMM E-Value=0.11)                    28   9.5  
SB_43513| Best HMM Match : 7tm_1 (HMM E-Value=5.9e-20)                 28   9.5  

>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
          Length = 2123

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -3

Query: 469  MTCDYCNCSVNLAQAVYVCVNKYK*SQFITLFSIGFPCKVFRN 341
            M+  YC C+ N++Q + VC         +   S+ + CK  RN
Sbjct: 1640 MSVKYCECTRNVSQVLRVCAQCQSSIASVPAMSVKY-CKCVRN 1681


>SB_50210| Best HMM Match : I-set (HMM E-Value=0.11)
          Length = 348

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -3

Query: 469 MTCDYCNCSVNLAQAVYVCVNKYK*SQFITLFSIGFPCKVFRN 341
           M+  YC C+ N++Q + VC         +   S+ + CK  RN
Sbjct: 94  MSVKYCECTRNVSQVLRVCAQCQSSIASVPAMSVKY-CKCARN 135


>SB_43513| Best HMM Match : 7tm_1 (HMM E-Value=5.9e-20)
          Length = 337

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = -2

Query: 320 VFGMSKLLT*FVNSLLYRNSTIRYC*SQILIFQILYST*NNKENDLAFY 174
           + GM  L++  +N LLY   ++RY    + IF+ +      K+ D +F+
Sbjct: 288 IIGMLSLVSALINPLLYGKMSLRYRKGFLFIFKKIAVICGGKQPDGSFF 336


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,724,818
Number of Sequences: 59808
Number of extensions: 367411
Number of successful extensions: 726
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2082369341
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)