Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060126.seq
(686 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51009| Best HMM Match : 7tm_1 (HMM E-Value=2.8e-14) 33 0.29
SB_14800| Best HMM Match : zf-B_box (HMM E-Value=8.2e-07) 32 0.38
SB_6522| Best HMM Match : Cyclotide (HMM E-Value=6.8) 31 0.87
SB_43077| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_7030| Best HMM Match : Kazal_2 (HMM E-Value=4.6e-08) 31 1.2
SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_9563| Best HMM Match : Kazal_1 (HMM E-Value=1.7e-07) 30 1.5
SB_29343| Best HMM Match : PPI_Ypi1 (HMM E-Value=0.91) 30 1.5
SB_30470| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_13131| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 3.5
SB_15403| Best HMM Match : CH (HMM E-Value=0) 29 3.5
SB_19374| Best HMM Match : Phage_integrase (HMM E-Value=4.3) 29 4.7
SB_51570| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_45252| Best HMM Match : DIT1_PvcA (HMM E-Value=6.5e-07) 28 8.1
SB_39863| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 8.1
SB_56316| Best HMM Match : SMC_C (HMM E-Value=2.4) 28 8.1
SB_51730| Best HMM Match : Methyltransf_6 (HMM E-Value=8.8) 28 8.1
>SB_51009| Best HMM Match : 7tm_1 (HMM E-Value=2.8e-14)
Length = 579
Score = 32.7 bits (71), Expect = 0.29
Identities = 19/71 (26%), Positives = 30/71 (42%)
Frame = +3
Query: 348 PCLKVHCSAGRVCEINEHGDAMCTASRTVPTRQTSRRMVCTNFNETWQSDCEVYASDAYA 527
PC C G VC GD T + VC+ FN+ +++ CE++ YA
Sbjct: 116 PCRDTFCPRGGVCTPYVEGDRSYTTCECPTSCPDLDDPVCSIFNQEFKNACEMH---KYA 172
Query: 528 STTLISAVVRN 560
+S ++N
Sbjct: 173 CKLQMSMAIKN 183
>SB_14800| Best HMM Match : zf-B_box (HMM E-Value=8.2e-07)
Length = 361
Score = 32.3 bits (70), Expect = 0.38
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -1
Query: 620 QCSQAFLGHVPVILDLKRGGIADHGTDQSCRGISIAGV 507
+C Q+ LGH P+I + G ++ G +SC+ IA +
Sbjct: 100 KCPQSLLGHAPMIRRKQGGSVSKKGPSKSCKHHHIASL 137
>SB_6522| Best HMM Match : Cyclotide (HMM E-Value=6.8)
Length = 292
Score = 31.1 bits (67), Expect = 0.87
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -1
Query: 620 QCSQAFLGHVPVILDLKRGGIADHGTDQSCR 528
+C Q+ LGH P+I + G ++ G +SC+
Sbjct: 100 KCPQSLLGHAPMIRRKQGGSVSKKGPSKSCK 130
>SB_43077| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/53 (32%), Positives = 21/53 (39%)
Frame = +3
Query: 348 PCLKVHCSAGRVCEINEHGDAMCTASRTVPTRQTSRRMVCTNFNETWQSDCEV 506
PCL V C CE DA C R P+ VC ET+ + C +
Sbjct: 302 PCLNVTCDYFAECEAFAADDAQCVCPRKCPSYVD---QVCATNGETFDNLCRL 351
>SB_7030| Best HMM Match : Kazal_2 (HMM E-Value=4.6e-08)
Length = 286
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/53 (32%), Positives = 21/53 (39%)
Frame = +3
Query: 348 PCLKVHCSAGRVCEINEHGDAMCTASRTVPTRQTSRRMVCTNFNETWQSDCEV 506
PCL V C CE DA C R P+ VC ET+ + C +
Sbjct: 36 PCLNVTCDYFAECEAFAADDAQCVCPRKCPSYVD---QVCATNGETFDNLCRL 85
>SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 825
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/20 (65%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
Frame = -2
Query: 265 SWYRSRPSSQ-TFRARCVQP 209
SW RSRPS++ T RARC+ P
Sbjct: 254 SWLRSRPSTRHTVRARCLHP 273
>SB_9563| Best HMM Match : Kazal_1 (HMM E-Value=1.7e-07)
Length = 170
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/51 (33%), Positives = 20/51 (39%)
Frame = +3
Query: 348 PCLKVHCSAGRVCEINEHGDAMCTASRTVPTRQTSRRMVCTNFNETWQSDC 500
PCL V C CE DA C R P+ VC ET+ + C
Sbjct: 79 PCLNVTCDYFAECEAFAADDAQCVCPRKCPSYVD---QVCATNGETFDNLC 126
>SB_29343| Best HMM Match : PPI_Ypi1 (HMM E-Value=0.91)
Length = 383
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/85 (21%), Positives = 38/85 (44%)
Frame = +1
Query: 193 RGDISEAEHIEHGMSESLDENDTMRQK*PELTTFSTRSLMKRMKTKKSTWKTLA*KSTAA 372
RG E + +H ++ NDT + + F+ + + ++ T+KT T
Sbjct: 222 RGKCREVQGCKHSRNDETSGNDTEDESKRKRVRFAEGT---NFENERQTYKTRVKNITFQ 278
Query: 373 QDVSAKSTNTETPCVLHQGLSLRDR 447
+D S+ S++ + ++H G + R
Sbjct: 279 KDRSSSSSDEDDESLIHDGFEMTFR 303
>SB_30470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 912
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +3
Query: 348 PCLKVHCSAGRVCEINEHGDAMCTASRTVPTRQTSRRMVCTNFNETWQSDC 500
PC++V C VC+ DA C T + R C N T+ ++C
Sbjct: 276 PCIEVTCDFFAVCQAFGPKDARCICPHNCATYENQR---CGEDNVTYTNEC 323
>SB_13131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +3
Query: 348 PCLKVHCSAGRVCEINEHGDAMCTASRTVPTRQTSRRMVCTNFNETWQSDC--EVYASDA 521
PC + C+ C+ DA C + + PT R C + T+++DC + Y +
Sbjct: 151 PCENMQCTHYATCKAYGPKDARCECAESCPTYDDER---CGSDGVTYKNDCLYKKYICET 207
Query: 522 YASTTLI 542
+ T++
Sbjct: 208 RLNVTIV 214
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/64 (32%), Positives = 27/64 (42%)
Frame = +3
Query: 6 RGFRRDCRLLHIETHHRKAR*RVFLRWPS*SRSFAPPTLVYAA*APQDPHHDY*TSNVGA 185
RG+R R H HHR++R R R P R P + +P PHH S +
Sbjct: 204 RGYRDQRRRSHSPAHHRRSRSRSRSRSPRRRRRSRSPRRRRRSRSP-SPHHRSHRSRSRS 262
Query: 186 ARPR 197
PR
Sbjct: 263 RSPR 266
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = +3
Query: 348 PCLKVHCSAGRVCEINEHGDAMCTASRTVPTRQTSRRM-VCTNFNETWQSDCEVYASDAY 524
PC V C C++ + G C P T M VC +T+ + CE+ AS
Sbjct: 1271 PCDNVSCDYYAQCQVEDDGSTSCKC----PIFCTYEYMPVCGTDGKTYGNKCEMRASACL 1326
Query: 525 ASTTLISA 548
ST + A
Sbjct: 1327 KSTMVTVA 1334
>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1488
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/64 (26%), Positives = 25/64 (39%)
Frame = +3
Query: 348 PCLKVHCSAGRVCEINEHGDAMCTASRTVPTRQTSRRMVCTNFNETWQSDCEVYASDAYA 527
PC V C C G A+C + P+ + VC T+ S C + A A
Sbjct: 779 PCKNVECKFKARCVGLPDGSAVCECNTECPSEASP---VCGQDGRTYSSTCAMDARACQA 835
Query: 528 STTL 539
T++
Sbjct: 836 QTSI 839
>SB_15403| Best HMM Match : CH (HMM E-Value=0)
Length = 1907
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +3
Query: 348 PCLKVHCSAGRVCEINEHGDAMCTASRTVPTRQTSRRMVCTNFNETWQSDCEVYA 512
PC KV C+ C G C RT P S ++VC + + + ++C + A
Sbjct: 1538 PCSKVKCAFYGQCVWYYDGRTQCECRRTCP---RSDQLVCGSDDRDYANECVLQA 1589
>SB_19374| Best HMM Match : Phage_integrase (HMM E-Value=4.3)
Length = 275
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = +1
Query: 295 STRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVLHQGLSLRDRLPD 456
S R M+ +K W+T K A T ++P L G++ +LPD
Sbjct: 32 SLRKAMRAAHAEKRNWRTELNKYLLAYSSKTHMTTGKSPAKLLYGMNRNKKLPD 85
>SB_51570| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1950
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -3
Query: 672 LKSXVPHANGG-SQTSRFSVQSGISRPR 592
L+ V +N G +QT F + SGI+RPR
Sbjct: 303 LREMVERSNSGRAQTGSFKITSGINRPR 330
>SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 344
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +3
Query: 348 PCLKVHCSAGRVCEINEHGDAMCTASRTVPTRQTSRRMVCTNFNETWQSDCEVY 509
PC V C AG+ C + G A C P + VC + T+ + CE++
Sbjct: 58 PCSNVFCHAGQEC-VAAKGKASCECLSECPDH---IKPVCGSDGVTYPNHCELH 107
>SB_45252| Best HMM Match : DIT1_PvcA (HMM E-Value=6.5e-07)
Length = 211
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +3
Query: 462 VCTNFNETWQSDCEVY-ASDAYASTTLISAVVRNTTTFQIEYYXNVAEKCLTALKS-EMS 635
+C + ++ EV SD + ++ + T +QIE +AE LTAL + +
Sbjct: 101 LCAQIQQIYEPGAEVIICSDGRVFSDIVGISEEHLTAYQIEIDRLIAELNLTALSTFNLD 160
Query: 636 DFPRSH 653
D + H
Sbjct: 161 DIKKIH 166
>SB_39863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2978
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +3
Query: 528 STTLIS--AVVRNTTTFQIEYYXNVAEKCLTALKSEMSDFPRSHAGLGFLTS 677
S T+I AV+ + F + NV CL + S+ P+ HA L L+S
Sbjct: 510 SITIIEDLAVISSDEAFPVHEVCNVLADCLKRCRHIYSNIPQIHASLENLSS 561
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/79 (22%), Positives = 27/79 (34%)
Frame = +3
Query: 348 PCLKVHCSAGRVCEINEHGDAMCTASRTVPTRQTSRRMVCTNFNETWQSDCEVYASDAYA 527
PC V C C G +C P VC + T++S+CE+ A A
Sbjct: 1407 PCSTVTCLYHSKCFPQADGTGVCICLDQCPP-DNQNASVCGSDLVTYRSECELKAKSCNA 1465
Query: 528 STTLISAVVRNTTTFQIEY 584
+ + + I Y
Sbjct: 1466 MRNVTTLFKGECANYYISY 1484
>SB_56316| Best HMM Match : SMC_C (HMM E-Value=2.4)
Length = 1023
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -3
Query: 672 LKSXVPHANGG-SQTSRFSVQSGISRPR 592
L+ V +N G +QT F + SGI+RPR
Sbjct: 648 LREMVERSNSGRAQTGSFRITSGINRPR 675
>SB_51730| Best HMM Match : Methyltransf_6 (HMM E-Value=8.8)
Length = 409
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -3
Query: 672 LKSXVPHANGGS-QTSRFSVQSGISRPR 592
L+ V +N G+ QT F + SG++RPR
Sbjct: 306 LREMVARSNSGNPQTGSFKITSGVNRPR 333
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,084,768
Number of Sequences: 59808
Number of extensions: 413063
Number of successful extensions: 1279
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1278
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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