Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30136
         (710 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY745219-1|AAU93486.1|  104|Anopheles gambiae cytochrome P450 pr...    25   1.8  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    25   3.1  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   4.1  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   4.1  
AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine...    23   7.2  

>AY745219-1|AAU93486.1|  104|Anopheles gambiae cytochrome P450
           protein.
          Length = 104

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 628 LMTAGRWPWKSESAKECSKDFTAEAT 705
           L T  +WP      +EC+K FT  AT
Sbjct: 18  LETLRKWPSHPLLVRECTKPFTIPAT 43


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
 Frame = +2

Query: 80  RTLDVRSGRMKL-SSYVRD----FRTPEASRFQSVNEGAL*AQMLGPERW*TM 223
           RT  V +G  ++  SY +D    + T E    +SV  G     +LGP  W TM
Sbjct: 588 RTKRVPAGLQRIIHSYFQDRELVYETSEGPVVRSVTAGVPQGSILGPTLWNTM 640


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -1

Query: 701  ASAVKSLEHSLADSDFHGHRPAVMSDQRLS 612
            A  V +LEHS  D  FH  +  V   ++L+
Sbjct: 3187 AHEVSTLEHSQIDKQFHDLKQTVQEYRQLA 3216


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -1

Query: 701  ASAVKSLEHSLADSDFHGHRPAVMSDQRLS 612
            A  V +LEHS  D  FH  +  V   ++L+
Sbjct: 3190 AHEVSTLEHSQIDKQFHDLKQTVQEYRQLA 3219


>AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine
           protease protein.
          Length = 405

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 309 PYTQFRRSICTSESLRSSTGFP 244
           P+T F RSIC  E    S+  P
Sbjct: 260 PFTDFLRSICLPEQNFESSATP 281


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 757,201
Number of Sequences: 2352
Number of extensions: 15378
Number of successful extensions: 35
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)