Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30131
         (616 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY994089-1|AAX86002.1|  267|Anopheles gambiae hyp37.7-like precu...    25   2.6  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   3.4  

>AY994089-1|AAX86002.1|  267|Anopheles gambiae hyp37.7-like
           precursor protein.
          Length = 267

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -3

Query: 221 LAKFSFLFFFNNITQITKFRCLNSIIYVLKKGVNKENIA 105
           L+K  F  F+N   + T  +  N+   +++K   KEN A
Sbjct: 158 LSKIDFTGFYNGTNKDTVIKLSNAFRGIVEKYARKENQA 196


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
 Frame = +3

Query: 57   RRPVRC*GLFYMRLVFSYIFFIYPFFEYVY--YRI*ATK-FCYLCYII 191
            +RP+    L+YM  +F+ IFF+    +++   +++  T  +C+L +II
Sbjct: 1331 QRPILQDILYYMDRIFTVIFFLEMLIKWLALGFKVYFTNAWCWLDFII 1378


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 497,290
Number of Sequences: 2352
Number of extensions: 9855
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)