Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30129
         (782 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    26   1.1  
U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    26   1.5  
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    25   2.0  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    24   6.1  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   8.1  
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    23   8.1  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    23   8.1  

>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
 Frame = -2

Query: 475 SGPFQRHIAAGA--EIAYFPGRFNKVLYDNVVAV 380
           +GP +RHI+AG   E    P  +N V+YD V+ V
Sbjct: 629 AGPVERHISAGVPQESILGPTLWN-VMYDGVLGV 661


>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 620 NTWAVLRSRTSSNIFESNEHLGD 688
           N WA+ + R   NI E  +HL D
Sbjct: 190 NLWAIFKKRLGKNIPEDLDHLFD 212


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1

Query: 661 FRKQRTPWRPVAQNFSVLAVKQRNS 735
           F   RT W PVA N+  L  K + +
Sbjct: 442 FSTNRTTWLPVASNYKTLNYKAQKA 466


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 23/81 (28%), Positives = 32/81 (39%)
 Frame = +1

Query: 439 LHLLRYDAERAPTGPVQPYPSEEDLRNAAPKKLALLYKNYCRPSEYYASFGNFYICSICP 618
           L LLR + +RA     Q    +E    AA  + A         +    SF    +  I  
Sbjct: 293 LRLLRENCDRARDRMRQTSDLQERSIAAAEHRTARAELGKAIKASKRNSFQE--LIDIAE 350

Query: 619 EYVGGASFANIVEHFRKQRTP 681
           E V GA +  ++ H R  RTP
Sbjct: 351 ENVFGAGYLVVLSHLRGGRTP 371


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 356 ASVGKPVNNRDHVIIENFIK 415
           AS+G+P++NR  V+    IK
Sbjct: 74  ASIGRPISNRASVMARFIIK 93


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 484 VQPYPSEEDLRNAAPKKL 537
           + P  SEEDL+ A  +KL
Sbjct: 287 IDPLASEEDLKEAVDRKL 304


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +2

Query: 197 KHRDRRSDHTPLIRRETLSLLSDDLYLKMKATSPNGQIP 313
           +HR+       LIR E   LL+  + +K+  T+  G IP
Sbjct: 100 RHREEYRRDMALIREENTKLLAQLMAMKV-VTTTAGSIP 137


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 825,262
Number of Sequences: 2352
Number of extensions: 17059
Number of successful extensions: 96
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 96
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81913191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)