Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30088
(622 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 27 0.36
AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 26 1.1
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 26 1.1
AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. 26 1.1
AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein prot... 26 1.1
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 25 1.5
AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein. 25 1.5
AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein. 25 1.5
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 25 1.5
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 23 7.8
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 23 7.8
>AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 27.5 bits (58), Expect = 0.36
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
Frame = +3
Query: 444 NVPPPPPTSTQKSFI----TTNVHPDTSKHKFRHQQGP 545
++PPPPPT+T +I TT H T+ + Q P
Sbjct: 209 DLPPPPPTTTTTVWIDPTATTTTHAPTTTTTWSDQPPP 246
>AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 25.8 bits (54), Expect = 1.1
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 4/28 (14%)
Frame = +3
Query: 444 NVPPPPPTSTQKSFI----TTNVHPDTS 515
++PPPPPT+T +I TT H T+
Sbjct: 209 DLPPPPPTTTTTVWIDPTATTTTHAPTT 236
Score = 23.8 bits (49), Expect = 4.5
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 444 NVPPPPPTSTQKSFITTNVHPDTSKHKFRHQQGPTIDGP 560
++PPPPPT+T + T T+ + + PT + P
Sbjct: 242 DLPPPPPTTTTTTVWTDPTTTTTTDYTTAYP--PTTNEP 278
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 25.8 bits (54), Expect = 1.1
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 4/28 (14%)
Frame = +3
Query: 444 NVPPPPPTSTQKSFI----TTNVHPDTS 515
++PPPPPT+T +I TT H T+
Sbjct: 209 DLPPPPPTTTTTVWIDPTATTTTHAPTT 236
Score = 23.8 bits (49), Expect = 4.5
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 444 NVPPPPPTSTQKSFITTNVHPDTSKHKFRHQQGPTIDGP 560
++PPPPPT+T + T T+ + + PT + P
Sbjct: 242 DLPPPPPTTTTTTVWTDPTTTTTTDYTTAYP--PTTNEP 278
>AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 25.8 bits (54), Expect = 1.1
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 4/28 (14%)
Frame = +3
Query: 444 NVPPPPPTSTQKSFI----TTNVHPDTS 515
++PPPPPT+T +I TT H T+
Sbjct: 208 DLPPPPPTTTTTVWIDPTATTTTHAPTT 235
Score = 23.8 bits (49), Expect = 4.5
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 444 NVPPPPPTSTQKSFITTNVHPDTSKHKFRHQQGPTIDGP 560
++PPPPPT+T + T T+ + + PT + P
Sbjct: 241 DLPPPPPTTTTTTVWTDPTTTTTTDYTTAYP--PTTNEP 277
>AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein
protein.
Length = 373
Score = 25.8 bits (54), Expect = 1.1
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 4/28 (14%)
Frame = +3
Query: 444 NVPPPPPTSTQKSFI----TTNVHPDTS 515
++PPPPPT+T +I TT H T+
Sbjct: 209 DLPPPPPTTTTTVWIDPTATTTTHAPTT 236
Score = 23.4 bits (48), Expect = 5.9
Identities = 7/10 (70%), Positives = 10/10 (100%)
Frame = +3
Query: 444 NVPPPPPTST 473
++PPPPPT+T
Sbjct: 242 DLPPPPPTTT 251
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 25.4 bits (53), Expect = 1.5
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 4/28 (14%)
Frame = +3
Query: 444 NVPPPPPTSTQKSFI----TTNVHPDTS 515
++PPPPPT+T +I TT H T+
Sbjct: 208 DLPPPPPTTTTTVWIDPTATTTTHVPTT 235
Score = 23.8 bits (49), Expect = 4.5
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 444 NVPPPPPTSTQKSFITTNVHPDTSKHKFRHQQGPTIDGP 560
++PPPPPT+T + T T+ + + PT + P
Sbjct: 241 DLPPPPPTTTTTTVWTDPTTTTTTDYTTAYP--PTTNEP 277
>AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 25.4 bits (53), Expect = 1.5
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 6/30 (20%)
Frame = +3
Query: 444 NVPPPPPTSTQKSFI------TTNVHPDTS 515
++PPPPPT+T +I TT+V P T+
Sbjct: 209 DLPPPPPTTTTTVWIDPTATTTTHVPPTTT 238
Score = 23.8 bits (49), Expect = 4.5
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 444 NVPPPPPTSTQKSFITTNVHPDTSKHKFRHQQGPTIDGP 560
++PPPPPT+T + T T+ + + PT + P
Sbjct: 242 DLPPPPPTTTTTTVWTDPTTTTTTDYTTAYP--PTTNEP 278
>AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 25.4 bits (53), Expect = 1.5
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 4/28 (14%)
Frame = +3
Query: 444 NVPPPPPTSTQKSFI----TTNVHPDTS 515
++PPPPPT+T +I TT H T+
Sbjct: 209 DLPPPPPTTTTTVWIDPTATTTTHVPTT 236
Score = 23.8 bits (49), Expect = 4.5
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 444 NVPPPPPTSTQKSFITTNVHPDTSKHKFRHQQGPTIDGP 560
++PPPPPT+T + T T+ + + PT + P
Sbjct: 242 DLPPPPPTTTTTTVWTDPTTTTTTDYTTAYP--PTTNEP 278
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
protein.
Length = 2051
Score = 25.4 bits (53), Expect = 1.5
Identities = 13/48 (27%), Positives = 19/48 (39%)
Frame = +2
Query: 470 NTKVVHHDKCAPRYKQAQVSPPARTYHRRATEDQDSSSKFIMATSVTS 613
NT H +CA Y + PP R A + S ++ A T+
Sbjct: 802 NTGDAHEVRCAAVYLLIRTKPPVYMLQRMAEQTHYDPSTYVRAAVKTA 849
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 23.0 bits (47), Expect = 7.8
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 197 SRLSKEINQSIYRSQNYFRTEQDLKEHEEYITA-EQVLKDAEPQLPA 334
+R EI Q + R ++ RTE+ + H E A Q + ++P PA
Sbjct: 1089 NREEAEIQQQLQREEDERRTEERRQLHNEANRAYRQRNRRSQPTPPA 1135
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 23.0 bits (47), Expect = 7.8
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +2
Query: 191 DGSRLSKEINQSIYRSQNYFRTEQDLKE 274
D RL EIN+ +NY + E + E
Sbjct: 413 DQDRLDSEINKKAQIEENYKKIESEKNE 440
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 597,965
Number of Sequences: 2352
Number of extensions: 11459
Number of successful extensions: 40
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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