Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0110
(698 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U03849-1|AAA53488.1| 388|Anopheles gambiae putative nucleic aci... 26 1.3
DQ370042-1|ABD18603.1| 194|Anopheles gambiae putative TIL domai... 25 1.7
DQ370039-1|ABD18600.1| 168|Anopheles gambiae putative TIL domai... 25 2.3
AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical prote... 25 2.3
AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical prote... 25 2.3
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 24 4.0
AY536865-1|AAT07965.1| 650|Anopheles gambiae tryptophan transpo... 24 4.0
AJ626713-1|CAF25029.1| 650|Anopheles gambiae tryptophan transpo... 24 4.0
AJ271117-1|CAB88872.1| 355|Anopheles gambiae serine protease pr... 24 4.0
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 24 5.3
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 24 5.3
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 23 7.0
>U03849-1|AAA53488.1| 388|Anopheles gambiae putative nucleic acid
binding protein protein.
Length = 388
Score = 25.8 bits (54), Expect = 1.3
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = -1
Query: 482 ASPTKQ*FSRPTPTKRHQLQVHVADCPEPDGSALQHHRRP 363
A+ T+ ++ TPT H+L + P+P+ ++ Q P
Sbjct: 311 ATSTEHRYTTRTPTTTHRLAARTSTPPDPETTSSQQCHPP 350
>DQ370042-1|ABD18603.1| 194|Anopheles gambiae putative TIL domain
polypeptide protein.
Length = 194
Score = 25.4 bits (53), Expect = 1.7
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 374 HRRPSVHLDPIREFQKCIRSCPLKLLDCTDL 282
H P P EFQ+C +CP D DL
Sbjct: 28 HPYPYDLCGPNEEFQECGTACPKTCADLNDL 58
>DQ370039-1|ABD18600.1| 168|Anopheles gambiae putative TIL domain
polypeptide protein.
Length = 168
Score = 25.0 bits (52), Expect = 2.3
Identities = 14/45 (31%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -1
Query: 374 HRRPSVHLDPIREFQKCIRSCPLKLLDCTDLLVDIFPEMLY-CFC 243
H P P EFQ C +CP D +L + + CFC
Sbjct: 28 HPYPYDVCGPNEEFQTCGTACPNTCADLNELQKPCTKQCIQGCFC 72
>AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 25.0 bits (52), Expect = 2.3
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -1
Query: 482 ASPTKQ*FSRPTPTKRHQLQVHVADCPEPDGSALQHHRRP 363
+S T S+P+P ++ QL H AD P S Q RRP
Sbjct: 12 SSTTSSSSSKPSPQQQQQL--HSADVPH--SSTSQSSRRP 47
>AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 25.0 bits (52), Expect = 2.3
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -1
Query: 482 ASPTKQ*FSRPTPTKRHQLQVHVADCPEPDGSALQHHRRP 363
+S T S+P+P ++ QL H AD P S Q RRP
Sbjct: 12 SSTTSSSSSKPSPQQQQQL--HSADVPH--SSTSQSSRRP 47
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 24.2 bits (50), Expect = 4.0
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = -2
Query: 490 SSMLAQQNSSFHDRLQRSATSFKYMSQIVQSLTGLRFSTTADHLCIS 350
++ L + + +R +AT+ +Y+S Q++ GLR T HL +S
Sbjct: 57 AAQLTYRLPALSNRHNDNATA-EYLSCYYQNVRGLRTKTKEFHLAVS 102
>AY536865-1|AAT07965.1| 650|Anopheles gambiae tryptophan
transporter protein.
Length = 650
Score = 24.2 bits (50), Expect = 4.0
Identities = 12/54 (22%), Positives = 23/54 (42%)
Frame = -2
Query: 484 MLAQQNSSFHDRLQRSATSFKYMSQIVQSLTGLRFSTTADHLCISIQSENSRNV 323
M+ + FH+ + R T M + L GL HL +++ + ++V
Sbjct: 340 MMYSSYNRFHNNVYRDVTIVSIMDTLTSMLAGLIVFGVIGHLAHVLEAPDIKHV 393
>AJ626713-1|CAF25029.1| 650|Anopheles gambiae tryptophan
transporter protein.
Length = 650
Score = 24.2 bits (50), Expect = 4.0
Identities = 12/54 (22%), Positives = 23/54 (42%)
Frame = -2
Query: 484 MLAQQNSSFHDRLQRSATSFKYMSQIVQSLTGLRFSTTADHLCISIQSENSRNV 323
M+ + FH+ + R T M + L GL HL +++ + ++V
Sbjct: 340 MMYSSYNRFHNNVYRDVTIVSIMDTLTSMLAGLIVFGVIGHLAHVLEAPDIKHV 393
>AJ271117-1|CAB88872.1| 355|Anopheles gambiae serine protease
protein.
Length = 355
Score = 24.2 bits (50), Expect = 4.0
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -3
Query: 459 FTTDSNEAPPASSTCRRLSRA*RVCASAPPQTICASRSNPRIPE 328
FTT ASS C + R VC ++ QT + S P PE
Sbjct: 53 FTTPEETQFLASSRCGEIGRKTLVCCASEQQT--RTSSFPTSPE 94
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 23.8 bits (49), Expect = 5.3
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 477 PNKTVVFTTDSNEA 436
PN VVF TD+N A
Sbjct: 1126 PNNAVVFNTDTNNA 1139
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 23.8 bits (49), Expect = 5.3
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 477 PNKTVVFTTDSNEA 436
PN VVF TD+N A
Sbjct: 1127 PNNAVVFNTDTNNA 1140
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 23.4 bits (48), Expect = 7.0
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Frame = +1
Query: 571 PXGSSC---GDRRPSLFAETWSXPXAGPMXLVHANNVXXF 681
P G +C G P FAE + GPM L A V F
Sbjct: 83 PPGKNCTSGGCCLPKCFAEKGNRGLPGPMGLKGAKGVRGF 122
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 712,821
Number of Sequences: 2352
Number of extensions: 15061
Number of successful extensions: 68
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 68
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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