Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0078.Seq
         (856 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY187041-1|AAO39755.1|  272|Anopheles gambiae putative antennal ...    26   1.7  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   3.9  
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    24   5.1  
AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine...    24   6.8  

>AY187041-1|AAO39755.1|  272|Anopheles gambiae putative antennal
           carrier protein TOL-1 protein.
          Length = 272

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 12/18 (66%), Positives = 14/18 (77%), Gaps = 1/18 (5%)
 Frame = -1

Query: 856 SKVDYKLKGLRL-MGNXF 806
           +KVDY + GLRL MGN F
Sbjct: 192 TKVDYTISGLRLHMGNLF 209


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 405  SWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKE 512
            SWL   HV    V E   +V+    +GS S +T+K+
Sbjct: 3198 SWLLLAHVAPAAVREVKRIVQNFFGWGSSSSRTTKD 3233


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +2

Query: 371 WFPVLHHHCQD 403
           W+P + HHC D
Sbjct: 100 WYPEIKHHCPD 110


>AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine
           protease protein.
          Length = 405

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +2

Query: 137 PRRVKTSVPCALARKASVTRAPFSIVSSPISCCKEG 244
           P ++K S+P     K S T  P+S    P   C  G
Sbjct: 307 PIKLKLSLPYVEREKCSKTFRPWSFALGPGQMCAGG 342


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 928,213
Number of Sequences: 2352
Number of extensions: 19985
Number of successful extensions: 32
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90959220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)