Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0124
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    25   2.3  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    25   2.3  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    23   9.2  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    23   9.2  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    23   9.2  
AJ302662-1|CAC35527.1|   76|Anopheles gambiae gSG9 protein protein.    23   9.2  

>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 16/63 (25%), Positives = 30/63 (47%)
 Frame = +2

Query: 248 KKSTRIIILPINVLFYLLFCFCITAIILELSNLF**HNTRSVH*KVIRV*RNYLLFNFII 427
           K+    +++PI +++ L+F   IT ++  +S        RS+H        NY LF+  +
Sbjct: 38  KRDPLYVVIPITIIYLLIF---ITGVVGNISTCIVIARNRSMH-----TATNYYLFSLAV 89

Query: 428 LYF 436
             F
Sbjct: 90  SDF 92


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 44  WTSCLNHLNLYRQTTSLSSQRVSSIGWK 127
           +T+CL  L L +  T L S+ +   GWK
Sbjct: 514 YTTCLEFLILPKIATDLPSETMDVRGWK 541


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 664 LPCSPDLGSSDFYV 623
           +PC P+   +DFYV
Sbjct: 340 IPCPPNYNPADFYV 353


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 664 LPCSPDLGSSDFYV 623
           +PC P+   +DFYV
Sbjct: 340 IPCPPNYNPADFYV 353


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 664 LPCSPDLGSSDFYV 623
           +PC P+   +DFYV
Sbjct: 318 IPCPPNYNPADFYV 331


>AJ302662-1|CAC35527.1|   76|Anopheles gambiae gSG9 protein protein.
          Length = 76

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +3

Query: 117 LAGRILQTTILEDYGTR 167
           L  RI   T L+DYGTR
Sbjct: 59  LGNRINTDTALDDYGTR 75


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 643,399
Number of Sequences: 2352
Number of extensions: 11812
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)