Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0117
         (696 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate deo...    94   3e-21
AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative deoxynucl...    88   2e-19
DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein O-fucosylt...    25   3.0  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    23   9.2  

>AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate
           deoxyribonucleoside kinaseprotein.
          Length = 246

 Score = 94.3 bits (224), Expect = 3e-21
 Identities = 40/59 (67%), Positives = 50/59 (84%)
 Frame = +1

Query: 256 WFXFIQHNIPIDADLIVYLKTSPSIVYQRIKKRARSEEQCVPLSYIEELHRLHEDWLIN 432
           W+ FI  NI I ADLIVYL+TSP +VY+R+K+RARSEE CVPL Y++ELH LHE+WLI+
Sbjct: 130 WYDFICCNIHIQADLIVYLQTSPEVVYERMKQRARSEESCVPLEYLKELHELHENWLIH 188



 Score = 67.3 bits (157), Expect = 4e-13
 Identities = 32/53 (60%), Positives = 38/53 (71%)
 Frame = +2

Query: 92  FQSYVSLTMLDMHRRPAPTPVKLMERSLFSARYCFVEHMMRNNTLHPAQFAVL 250
           FQ+YV+LTMLDMH       VKLMERSLFSAR CFVE M+ + +LH   + VL
Sbjct: 75  FQTYVTLTMLDMHTCQTDKSVKLMERSLFSARNCFVESMLASGSLHQGMYNVL 127



 Score = 35.5 bits (78), Expect = 0.002
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +3

Query: 12  VEMWRDLKGCNLLELMYKDPEKW 80
           VE WR+  G NLL+LMYK+  +W
Sbjct: 49  VEKWRNCGGVNLLDLMYKESHRW 71


>AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative
           deoxynucleoside kinase protein.
          Length = 245

 Score = 88.2 bits (209), Expect = 2e-19
 Identities = 39/59 (66%), Positives = 49/59 (83%)
 Frame = +1

Query: 256 WFXFIQHNIPIDADLIVYLKTSPSIVYQRIKKRARSEEQCVPLSYIEELHRLHEDWLIN 432
           W+ FI  NI I ADL VYL+TSP +VY+R+K+RARSEE CVPL Y++ELH LHE+WLI+
Sbjct: 130 WYDFICCNIHIQADL-VYLQTSPEVVYERMKQRARSEESCVPLEYLKELHELHENWLIH 187



 Score = 67.3 bits (157), Expect = 4e-13
 Identities = 32/53 (60%), Positives = 38/53 (71%)
 Frame = +2

Query: 92  FQSYVSLTMLDMHRRPAPTPVKLMERSLFSARYCFVEHMMRNNTLHPAQFAVL 250
           FQ+YV+LTMLDMH       VKLMERSLFSAR CFVE M+ + +LH   + VL
Sbjct: 75  FQTYVTLTMLDMHTCQTDKSVKLMERSLFSARNCFVESMLASGSLHQGMYNVL 127



 Score = 35.5 bits (78), Expect = 0.002
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +3

Query: 12  VEMWRDLKGCNLLELMYKDPEKW 80
           VE WR+  G NLL+LMYK+  +W
Sbjct: 49  VEKWRNCGGVNLLDLMYKESHRW 71


>DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein
           O-fucosyltransferase 2 protein.
          Length = 451

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 8/27 (29%), Positives = 18/27 (66%)
 Frame = +3

Query: 312 KDITFNSVPKNQKESSFRRAVCAPVIH 392
           KD+TFN+  K++K+ +  +    P+++
Sbjct: 424 KDLTFNTFCKSEKDMNCEKNTVWPIVY 450


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +1

Query: 292 ADLIVYLKTSPSIVYQR-IKKRARSE 366
           A  IVYLK + S V QR IK R +++
Sbjct: 350 APTIVYLKIASSKVLQRLIKSRGKAQ 375


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 713,014
Number of Sequences: 2352
Number of extensions: 14116
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)