Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0113
         (620 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       27   0.64 
AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      25   2.6  
AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding pr...    24   3.4  
AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding pr...    23   5.9  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    23   5.9  

>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 26.6 bits (56), Expect = 0.64
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = -2

Query: 478 GRAHDPPVVKWLQKPIDIYNVNAAVQFETRVLRS 377
           G  HDP   +  Q P+++Y V    +F  R + +
Sbjct: 257 GTYHDPKKNETTQTPLEVYTVRRGARFRFRFINA 290


>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 221 RNRRVYDDRCIIIFCVVLLYYTYFYW 298
           RNRR     C  + CVV++ +   YW
Sbjct: 166 RNRRDRQPCCSTLLCVVVVPFCCRYW 191


>AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding
           protein AgamOBP41 protein.
          Length = 279

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = +3

Query: 102 PIDIHNVNVPPTLRYKF*SLKYSYNGCXSLQTETHYCFTAEIG 230
           P D +NVN   T   +  +L+ +   C  L  E+  C+    G
Sbjct: 102 PADAYNVNRTETCLQELPALELNAEKCCGLAFESFLCYYYNYG 144


>AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding
           protein OBPjj5a protein.
          Length = 272

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -1

Query: 395 DKSSKVSVLTDQRLFHLSNRNALLRSLTRRHTTSKN 288
           +K +K   +  +  FHL   N   R+  RR+ +S+N
Sbjct: 129 EKFTKSECVNIRNNFHLPKSNRNCRTAARRNHSSRN 164


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +2

Query: 224 NRRVYDDRCIIIFCVVLLYYTYFYWSYDVW 313
           NRRV  DR   I+C        F+W   VW
Sbjct: 138 NRRV--DRFSKIYCCCHFSMATFFWFMPVW 165


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,558
Number of Sequences: 2352
Number of extensions: 12488
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)