Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0109
         (636 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ278310-1|CAB93496.1|  219|Anopheles gambiae serine protease-li...    25   2.7  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   8.1  

>AJ278310-1|CAB93496.1|  219|Anopheles gambiae serine protease-like
           protein protein.
          Length = 219

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = +1

Query: 490 TLSHIFRGGLVHWAMGC 540
           +++H ++ G+V W +GC
Sbjct: 167 SVNHYYQAGMVAWGIGC 183


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -2

Query: 575 FLNHFKLYDYSLQPIAQCTSPPLNMCDRVRDAE 477
           FL+    Y Y L  +    SP  + C+   DAE
Sbjct: 892 FLSSHGFYAYQLHRMQLTGSPLCDACEEPEDAE 924


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 633,661
Number of Sequences: 2352
Number of extensions: 11444
Number of successful extensions: 22
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)